mRNA_M-pyrifera_M_contig116206.3365.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig116206.3365.1
Unique NamemRNA_M-pyrifera_M_contig116206.3365.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A0B7ABY9_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7ABY9_9EUPU)

HSP 1 Score: 148 bits (374), Expect = 2.080e-38
Identity = 75/165 (45.45%), Postives = 109/165 (66.06%), Query Frame = 1
Query:    1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLF 495
            V   E +  C SF +HNEFLL TT+  +LR I    +      L   + H +D + R+VE GSRIV VV  S+++VLQMPRGNLET++PRAL+LS+ +  + +G+   AF  MR+HR++LNLL D  P  F +N++++I QI NP  ++VF++ L E DVT T++
Sbjct:    1 VNGVEVASNCTSFGIHNEFLLLTTLDHTLRCICRTTKLSELPKLSDDKAHPFDESIRKVERGSRIVTVVGDSTKLVLQMPRGNLETVHPRALVLSSLKHIMDSGKILDAFLMMRKHRINLNLLYDHNPSYFLDNVDNIINQIHNPSYLNVFLTDLIEEDVTHTMY 165          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: F0ZLT5_DICPU (Elongator complex protein 1 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZLT5_DICPU)

HSP 1 Score: 148 bits (373), Expect = 4.650e-38
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1
Query:   25 ECNSFAVHNEFLLFTTMSSSLRMID------TANQEFSEAALDTT----------QVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQKRM 519
            +CNS+++HN+FLLFTT+S  LR +       T+   +   A   T          Q   YD + R VE G+RIVAVVPH +R+VLQMPRGNLE I PR+L LST R+ L   EY  AF  MRR+R+D+NL+ D  P  F  ++E+ I QI N   +++F+S LR+ D T+TLFV+ E K +
Sbjct:  618 DCNSYSLHNKFLLFTTVSHVLRSVSLLAPAPTSPLVYIPPAQQNTYANGKSQAIQQTSNYDDSIRDVERGARIVAVVPHDTRLVLQMPRGNLEAISPRSLTLSTIRELLNQHEYLKAFMLMRRNRIDMNLIYDHNPTDFLRHVETFIDQIQNIDYLNLFISSLRDEDTTKTLFVDLETKHL 798          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A151ZSH5_9MYCE (Elongator complex protein 1 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZSH5_9MYCE)

HSP 1 Score: 147 bits (371), Expect = 8.620e-38
Identity = 77/182 (42.31%), Postives = 118/182 (64.84%), Query Frame = 1
Query:   19 SRECNSFAVHNEFLLFTTMSSSLRMI-------------------DTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVERE 507
            S +CNSFA+HN+FL+FTT +  LR +                     + Q+ S+     + V +YD + R+VE GS+IVAVVPH +R+VLQMPRGNLETI PR+L LST R+ L   +Y +AF  MRR+R+D+NL+ D+ P+ F ++++  + QI +   +++F+S LR+ D T++LF++ E
Sbjct:  602 STDCNSFAIHNKFLMFTTTAHVLRSVPLSLPPPSQPLVYQQPSIASQSQQQNSKFGPPPSAV-SYDDSIREVERGSKIVAVVPHDTRLVLQMPRGNLETISPRSLTLSTIRELLSQHQYESAFSLMRRNRIDMNLIYDYNPKDFIQHIDEFVNQIQSIDYLNLFISSLRDEDTTKSLFIDLE 782          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A8J4URB6_9MYCE (Elongator complex protein 1 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4URB6_9MYCE)

HSP 1 Score: 147 bits (370), Expect = 1.180e-37
Identity = 81/183 (44.26%), Postives = 114/183 (62.30%), Query Frame = 1
Query:   22 RECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTT--QVH---------------AYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQKRM 519
            ++CNSFA+HN+FLLFTT+S  LR +  A    +   + T   Q+H                YD + R+VE GSRIVAVVPH +R+VLQMPRGNLE I PR+L LST R+ L   +Y  AF  MRR+R+DLNL+ D  P  F +++E  + Q+     ++ F+S LR+ D T++LF++ E K +
Sbjct:  612 QDCNSFALHNKFLLFTTISHVLRSVSLAAPAPTTPLVYTPPPQIHYTKNYQPPAGANAQTVYDDSIREVERGSRIVAVVPHDTRLVLQMPRGNLEAISPRSLTLSTIREMLNNHQYIKAFMLMRRNRIDLNLIYDHNPSDFLKHIEEFVDQVSQIDYLNQFISSLRDEDTTKSLFIDLETKHL 794          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A2T7NG11_POMCA (Elongator complex protein 1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NG11_POMCA)

HSP 1 Score: 146 bits (369), Expect = 1.600e-37
Identity = 74/165 (44.85%), Postives = 113/165 (68.48%), Query Frame = 1
Query:    1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLF 495
            V + E +  C SFA+HNEFLL TT+S ++R I         A+L   + H +D + R+VE GSRIV VV   +++VLQMPRGNLETI+PRAL+LS+ R+ L   EY  A   M++HR++LNL+ D  P+AF E++ + I+QI +   +++F++ L++ DVT+T++
Sbjct:  632 VNNVEVASNCTSFAIHNEFLLLTTLSHTVRCIHRHTSVRDLASLSDGKAHPFDESIRRVERGSRIVVVVAEDTKLVLQMPRGNLETIHPRALVLSSVRRLLDRYEYSKALIIMKKHRINLNLIHDHNPQAFLEHVSNFIQQISSVSDLNLFLTELQDEDVTKTMY 796          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: UPI00035A1FF8 (elongator complex protein 1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A1FF8)

HSP 1 Score: 146 bits (368), Expect = 2.180e-37
Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 1
Query:    1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQK 513
            V   E +  C SF VHN+FLL TT++ ++R I    +      L   + H +D + R+VE GSRIV VV + +++VLQMPRGNLETI+PRAL+LST +  L +     AF  MR+HR+++NLL D  P  F ENL+ VI+QI +   +++F++ L E DVTRT++    Q+
Sbjct:  616 VNDVEVASNCTSFGVHNDFLLITTLTHTVRCICKTTKLSDLPKLSDGKAHPFDESIRRVERGSRIVTVVGNDTKLVLQMPRGNLETIHPRALVLSTLKHLLDSDRIQEAFMVMRKHRINMNLLYDHSPSLFLENLDQVIEQIQSVNHLNLFLTDLIEEDVTRTMYTASYQR 786          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: F4PKF5_CAVFA (Elongator complex protein 1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PKF5_CAVFA)

HSP 1 Score: 145 bits (367), Expect = 2.970e-37
Identity = 78/174 (44.83%), Postives = 112/174 (64.37%), Query Frame = 1
Query:   25 ECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQV------------HAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQ 510
            +CN+F +HN+F+LFTT+S  LR +       S AA  TT V             AYD + R+VE G+R+V  VPH +RV+LQMPRGNLE I PR+L LST R+ L A +YG AF  MRR+R+D+N + D  P+ F ++++  I Q+     +++F++ LRE D T+TLFV+ E+
Sbjct:  530 DCNNFTLHNKFILFTTISHLLRSVP-----LSLAASATTPVITATHPLTGKTSTAYDDSVREVERGARVVCAVPHDTRVILQMPRGNLEAIAPRSLTLSTIREMLDAHQYGKAFATMRRNRIDMNFIYDHNPQDFLKHIDIFIDQVPQIDFLNLFITTLREDDTTKTLFVDLEK 698          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: V4A9R2_LOTGI (Elongator complex protein 1 (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A9R2_LOTGI)

HSP 1 Score: 145 bits (365), Expect = 5.480e-37
Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 1
Query:    1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQK 513
            V + E +  C+SF VH+EFLL TT+S +LR I+   Q     +L   + H +D + R+VE GSRIV VVP   +++LQMPRGNLE IYPRAL+LS  R  L   EY  A+  M++HR+++NLL D  P  F  ++   I+QID+   +++ V+GL+E DVT T++    Q+
Sbjct:  547 VNNIEVASNCSSFIVHSEFLLLTTLSHTLRCINLHTQLKDLPSLSDGKEHPFDESIRRVERGSRIVLVVPDDIKLILQMPRGNLEGIYPRALVLSAVRHHLDRFEYKKAYTIMKKHRINMNLLYDHNPTLFLNHITDFIQQIDHVTDLNIIVTGLQEEDVTVTMYTAAYQQ 717          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A2C9M037_BIOGL (Elongator complex protein 1 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9M037_BIOGL)

HSP 1 Score: 145 bits (365), Expect = 5.510e-37
Identity = 73/165 (44.24%), Postives = 112/165 (67.88%), Query Frame = 1
Query:    1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLF 495
            V + E +  C SF VHNEFLL TT S ++R I  A Q    ++L  T+ H +D + R+VE GS+I+ +V +S++V+LQMPRGNLETI+PRAL+LS+ +  + + +   AF  MR HR++LNLL D  P  F  +++  I+Q+D+P  ++V ++ L E DVT+T++
Sbjct:  614 VNNTEIASNCTSFKVHNEFLLLTTFSHTIRCISRACQLNDLSSLSDTKSHPFDESIRRVERGSQIINIVANSTKVILQMPRGNLETIHPRALVLSSLKHLMDSDKMLEAFLMMRTHRINLNLLHDHNPSHFLSHIDQFIRQVDSPAHLNVLLTDLMEEDVTQTMY 778          
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A507EE61_9FUNG (Elongator complex protein 1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EE61_9FUNG)

HSP 1 Score: 145 bits (365), Expect = 5.520e-37
Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 1
Query:   19 SRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLF 495
            S +C SF VHN+FL+ TT + + R I   N   SE  L  T    +D   R+VE GS+IV  VP  + +VLQMPRGNLET+YPRAL+L+  R+ +   +Y TAF   R+HR+DLN L D + + FE+N+E+ +  +D+P  +++F+S LR+ DVT T++
Sbjct:  627 SSDCTSFHVHNDFLILTTFTHTARFIS-LNVPLSEFKLVDTSASPFDEHVRRVERGSKIVIAVPSDTSLVLQMPRGNLETVYPRALVLAAVRRAISNVDYRTAFVLCRKHRIDLNFLVDCDRQGFEKNVETFVSMVDDPDYLNLFISSLRDEDVTITMY 784          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B7ABY9_9EUPU2.080e-3845.45Uncharacterized protein (Fragment) n=1 Tax=Arion v... [more]
F0ZLT5_DICPU4.650e-3845.86Elongator complex protein 1 n=1 Tax=Dictyostelium ... [more]
A0A151ZSH5_9MYCE8.620e-3842.31Elongator complex protein 1 n=1 Tax=Tieghemosteliu... [more]
A0A8J4URB6_9MYCE1.180e-3744.26Elongator complex protein 1 n=1 Tax=Polysphondyliu... [more]
A0A2T7NG11_POMCA1.600e-3744.85Elongator complex protein 1 n=2 Tax=Pomacea canali... [more]
UPI00035A1FF82.180e-3744.44elongator complex protein 1 n=1 Tax=Aplysia califo... [more]
F4PKF5_CAVFA2.970e-3744.83Elongator complex protein 1 n=1 Tax=Cavenderia fas... [more]
V4A9R2_LOTGI5.480e-3744.44Elongator complex protein 1 (Fragment) n=1 Tax=Lot... [more]
A0A2C9M037_BIOGL5.510e-3744.24Elongator complex protein 1 n=1 Tax=Biomphalaria g... [more]
A0A507EE61_9FUNG5.520e-3745.28Elongator complex protein 1 n=1 Tax=Powellomyces h... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116206contigM-pyrifera_M_contig116206:1..519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score70.5
Seed ortholog evalue3.9e-10
Seed eggNOG ortholog5786.XP_003288377.1
Preferred nameIKBKAP
KEGG koko:K11373
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000049,GO:0000123,GO:0000166,GO:0001101,GO:0001510,GO:0001932,GO:0002097,GO:0002098,GO:0002119,GO:0002164,GO:0002376,GO:0002926,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004672,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006417,GO:0006448,GO:0006450,GO:0006464,GO:0006468,GO:0006518,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006955,GO:0006979,GO:0007154,GO:0007165,GO:0007249,GO:0007252,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007549,GO:0007610,GO:0007611,GO:0007612,GO:0007635,GO:0008023,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0008306,GO:0008355,GO:0008607,GO:0009047,GO:0009058,GO:0009059,GO:0009451,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009787,GO:0009790,GO:0009791,GO:0009889,GO:0009892,GO:0009965,GO:0009966,GO:0009987,GO:0009994,GO:0010016,GO:0010033,GO:0010154,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0010646,GO:0010928,GO:0016043,GO:0016070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019207,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019887,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0030154,GO:0030234,GO:0030334,GO:0030335,GO:0030488,GO:0030554,GO:0031248,GO:0031323,GO:0031326,GO:0031399,GO:0031537,GO:0031538,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032870,GO:0032879,GO:0032991,GO:0033588,GO:0033993,GO:0034248,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035265,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0040007,GO:0040012,GO:0040017,GO:0040025,GO:0040029,GO:0042048,GO:0042127,GO:0042221,GO:0042325,GO:0042995,GO:0043005,GO:0043025,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043549,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045859,GO:0046483,GO:0048232,GO:0048366,GO:0048367,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048530,GO:0048569,GO:0048583,GO:0048589,GO:0048598,GO:0048599,GO:0048608,GO:0048609,GO:0048731,GO:0048827,GO:0048831,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051171,GO:0051174,GO:0051239,GO:0051246,GO:0051252,GO:0051270,GO:0051272,GO:0051338,GO:0051704,GO:0051716,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071704,GO:0071840,GO:0080090,GO:0080178,GO:0090304,GO:0090698,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0097458,GO:0097659,GO:0098772,GO:0099402,GO:0120025,GO:0140018,GO:0140096,GO:1900247,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901419,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1902493,GO:1902494,GO:1903506,GO:1905392,GO:1905957,GO:1990234,GO:2000024,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000765,GO:2001141
EggNOG free text desc.Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation
EggNOG OGs3X93J@554915,COG5290@1,KOG1920@2759
COG Functional cat.K
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03016,ko03036
Exons1
Model size519
Cds size228
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116206.3365.1prot_M-pyrifera_M_contig116206.3365.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig116206 73..300 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815679.1040452-UTR-M-pyrifera_M_contig116206:0..721622815679.1040452-UTR-M-pyrifera_M_contig116206:0..72Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig116206 1..72 +
1692277518.1666315-UTR-M-pyrifera_M_contig116206:0..721692277518.1666315-UTR-M-pyrifera_M_contig116206:0..72Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig116206 1..72 +
1622815679.1274247-UTR-M-pyrifera_M_contig116206:300..5191622815679.1274247-UTR-M-pyrifera_M_contig116206:300..519Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig116206 301..519 +
1692277518.1950662-UTR-M-pyrifera_M_contig116206:300..5191692277518.1950662-UTR-M-pyrifera_M_contig116206:300..519Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig116206 301..519 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815679.1144-CDS-M-pyrifera_M_contig116206:72..3001622815679.1144-CDS-M-pyrifera_M_contig116206:72..300Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116206 73..300 +
1692277518.1865637-CDS-M-pyrifera_M_contig116206:72..3001692277518.1865637-CDS-M-pyrifera_M_contig116206:72..300Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig116206 73..300 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig116206.3365.1

>prot_M-pyrifera_M_contig116206.3365.1 ID=prot_M-pyrifera_M_contig116206.3365.1|Name=mRNA_M-pyrifera_M_contig116206.3365.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
MSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSR
VVLQMPRGNLETIYPRALLLSTCRQ*
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mRNA from alignment at M-pyrifera_M_contig116206:1..519+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig116206.3365.1 ID=mRNA_M-pyrifera_M_contig116206.3365.1|Name=mRNA_M-pyrifera_M_contig116206.3365.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig116206:1..519+ (Macrocystis pyrifera P11B4 male)
GTTGCCAGCTTCGAGTGCTCGCGCGAGTGCAACAGTTTCGCTGTTCACAA CGAGTTCCTCCTCTTCACCACCATGAGCAGTTCCCTTCGCATGATCGACA CCGCCAACCAAGAGTTCTCTGAGGCAGCGCTCGACACCACTCAGGTCCAT GCCTATGACACCACTGGTCGACAGGTGGAGAACGGCAGCAGAATTGTGGC TGTGGTACCACACAGCAGCAGAGTTGTGTTGCAGATGCCTAGAGGTAATC TGGAGACGATTTACCCTCGAGCCCTTCTGCTCTCCACCTGCCGCCAGTAG CTCAAGGCAGGCGAGTATGGAACGGCGTTCAGAGAGATGAGGCGTCACAG AGTGGACTTGAACCTTCTCTGTGATTTCGAGCCCCGAGCGTTCGAGGAGA ACCTCGAGAGTGTCATCAAACAGATCGACAATCCACAGCAGATCTCAGTG TTTGTCTCTGGCCTACGAGAGGCTGACGTCACTCGCACTCTCTTTGTGGA GCGAGAACAGAAGAGAATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig116206:1..519+

>mRNA_M-pyrifera_M_contig116206.3365.1 ID=mRNA_M-pyrifera_M_contig116206.3365.1|Name=mRNA_M-pyrifera_M_contig116206.3365.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig116206:1..519+ (Macrocystis pyrifera P11B4 male)
ATGAGCAGTTCCCTTCGCATGATCGACACCGCCAACCAAGAGTTCTCTGA
GGCAGCGCTCGACACCACTCAGGTCCATGCCTATGACACCACTGGTCGAC
AGGTGGAGAACGGCAGCAGAATTGTGGCTGTGGTACCACACAGCAGCAGA
GTTGTGTTGCAGATGCCTAGAGGTAATCTGGAGACGATTTACCCTCGAGC
CCTTCTGCTCTCCACCTGCCGCCAGTAGATGAGCAGTTCCCTTCGCATGA
TCGACACCGCCAACCAAGAGTTCTCTGAGGCAGCGCTCGACACCACTCAG
GTCCATGCCTATGACACCACTGGTCGACAGGTGGAGAACGGCAGCAGAAT
TGTGGCTGTGGTACCACACAGCAGCAGAGTTGTGTTGCAGATGCCTAGAG
GTAATCTGGAGACGATTTACCCTCGAGCCCTTCTGCTCTCCACCTGCCGC
CAGTAG
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