mRNA_M-pyrifera_M_contig116206.3365.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A0B7ABY9_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7ABY9_9EUPU) HSP 1 Score: 148 bits (374), Expect = 2.080e-38 Identity = 75/165 (45.45%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLF 495
V E + C SF +HNEFLL TT+ +LR I + L + H +D + R+VE GSRIV VV S+++VLQMPRGNLET++PRAL+LS+ + + +G+ AF MR+HR++LNLL D P F +N++++I QI NP ++VF++ L E DVT T++
Sbjct: 1 VNGVEVASNCTSFGIHNEFLLLTTLDHTLRCICRTTKLSELPKLSDDKAHPFDESIRKVERGSRIVTVVGDSTKLVLQMPRGNLETVHPRALVLSSLKHIMDSGKILDAFLMMRKHRINLNLLYDHNPSYFLDNVDNIINQIHNPSYLNVFLTDLIEEDVTHTMY 165
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: F0ZLT5_DICPU (Elongator complex protein 1 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZLT5_DICPU) HSP 1 Score: 148 bits (373), Expect = 4.650e-38 Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1
Query: 25 ECNSFAVHNEFLLFTTMSSSLRMID------TANQEFSEAALDTT----------QVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQKRM 519
+CNS+++HN+FLLFTT+S LR + T+ + A T Q YD + R VE G+RIVAVVPH +R+VLQMPRGNLE I PR+L LST R+ L EY AF MRR+R+D+NL+ D P F ++E+ I QI N +++F+S LR+ D T+TLFV+ E K +
Sbjct: 618 DCNSYSLHNKFLLFTTVSHVLRSVSLLAPAPTSPLVYIPPAQQNTYANGKSQAIQQTSNYDDSIRDVERGARIVAVVPHDTRLVLQMPRGNLEAISPRSLTLSTIRELLNQHEYLKAFMLMRRNRIDMNLIYDHNPTDFLRHVETFIDQIQNIDYLNLFISSLRDEDTTKTLFVDLETKHL 798
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A151ZSH5_9MYCE (Elongator complex protein 1 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZSH5_9MYCE) HSP 1 Score: 147 bits (371), Expect = 8.620e-38 Identity = 77/182 (42.31%), Postives = 118/182 (64.84%), Query Frame = 1
Query: 19 SRECNSFAVHNEFLLFTTMSSSLRMI-------------------DTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVERE 507
S +CNSFA+HN+FL+FTT + LR + + Q+ S+ + V +YD + R+VE GS+IVAVVPH +R+VLQMPRGNLETI PR+L LST R+ L +Y +AF MRR+R+D+NL+ D+ P+ F ++++ + QI + +++F+S LR+ D T++LF++ E
Sbjct: 602 STDCNSFAIHNKFLMFTTTAHVLRSVPLSLPPPSQPLVYQQPSIASQSQQQNSKFGPPPSAV-SYDDSIREVERGSKIVAVVPHDTRLVLQMPRGNLETISPRSLTLSTIRELLSQHQYESAFSLMRRNRIDMNLIYDYNPKDFIQHIDEFVNQIQSIDYLNLFISSLRDEDTTKSLFIDLE 782
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A8J4URB6_9MYCE (Elongator complex protein 1 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4URB6_9MYCE) HSP 1 Score: 147 bits (370), Expect = 1.180e-37 Identity = 81/183 (44.26%), Postives = 114/183 (62.30%), Query Frame = 1
Query: 22 RECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTT--QVH---------------AYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQKRM 519
++CNSFA+HN+FLLFTT+S LR + A + + T Q+H YD + R+VE GSRIVAVVPH +R+VLQMPRGNLE I PR+L LST R+ L +Y AF MRR+R+DLNL+ D P F +++E + Q+ ++ F+S LR+ D T++LF++ E K +
Sbjct: 612 QDCNSFALHNKFLLFTTISHVLRSVSLAAPAPTTPLVYTPPPQIHYTKNYQPPAGANAQTVYDDSIREVERGSRIVAVVPHDTRLVLQMPRGNLEAISPRSLTLSTIREMLNNHQYIKAFMLMRRNRIDLNLIYDHNPSDFLKHIEEFVDQVSQIDYLNQFISSLRDEDTTKSLFIDLETKHL 794
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A2T7NG11_POMCA (Elongator complex protein 1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NG11_POMCA) HSP 1 Score: 146 bits (369), Expect = 1.600e-37 Identity = 74/165 (44.85%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLF 495
V + E + C SFA+HNEFLL TT+S ++R I A+L + H +D + R+VE GSRIV VV +++VLQMPRGNLETI+PRAL+LS+ R+ L EY A M++HR++LNL+ D P+AF E++ + I+QI + +++F++ L++ DVT+T++
Sbjct: 632 VNNVEVASNCTSFAIHNEFLLLTTLSHTVRCIHRHTSVRDLASLSDGKAHPFDESIRRVERGSRIVVVVAEDTKLVLQMPRGNLETIHPRALVLSSVRRLLDRYEYSKALIIMKKHRINLNLIHDHNPQAFLEHVSNFIQQISSVSDLNLFLTELQDEDVTKTMY 796
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: UPI00035A1FF8 (elongator complex protein 1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A1FF8) HSP 1 Score: 146 bits (368), Expect = 2.180e-37 Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQK 513
V E + C SF VHN+FLL TT++ ++R I + L + H +D + R+VE GSRIV VV + +++VLQMPRGNLETI+PRAL+LST + L + AF MR+HR+++NLL D P F ENL+ VI+QI + +++F++ L E DVTRT++ Q+
Sbjct: 616 VNDVEVASNCTSFGVHNDFLLITTLTHTVRCICKTTKLSDLPKLSDGKAHPFDESIRRVERGSRIVTVVGNDTKLVLQMPRGNLETIHPRALVLSTLKHLLDSDRIQEAFMVMRKHRINMNLLYDHSPSLFLENLDQVIEQIQSVNHLNLFLTDLIEEDVTRTMYTASYQR 786
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: F4PKF5_CAVFA (Elongator complex protein 1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PKF5_CAVFA) HSP 1 Score: 145 bits (367), Expect = 2.970e-37 Identity = 78/174 (44.83%), Postives = 112/174 (64.37%), Query Frame = 1
Query: 25 ECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQV------------HAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQ 510
+CN+F +HN+F+LFTT+S LR + S AA TT V AYD + R+VE G+R+V VPH +RV+LQMPRGNLE I PR+L LST R+ L A +YG AF MRR+R+D+N + D P+ F ++++ I Q+ +++F++ LRE D T+TLFV+ E+
Sbjct: 530 DCNNFTLHNKFILFTTISHLLRSVP-----LSLAASATTPVITATHPLTGKTSTAYDDSVREVERGARVVCAVPHDTRVILQMPRGNLEAIAPRSLTLSTIREMLDAHQYGKAFATMRRNRIDMNFIYDHNPQDFLKHIDIFIDQVPQIDFLNLFITTLREDDTTKTLFVDLEK 698
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: V4A9R2_LOTGI (Elongator complex protein 1 (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A9R2_LOTGI) HSP 1 Score: 145 bits (365), Expect = 5.480e-37 Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLFVEREQK 513
V + E + C+SF VH+EFLL TT+S +LR I+ Q +L + H +D + R+VE GSRIV VVP +++LQMPRGNLE IYPRAL+LS R L EY A+ M++HR+++NLL D P F ++ I+QID+ +++ V+GL+E DVT T++ Q+
Sbjct: 547 VNNIEVASNCSSFIVHSEFLLLTTLSHTLRCINLHTQLKDLPSLSDGKEHPFDESIRRVERGSRIVLVVPDDIKLILQMPRGNLEGIYPRALVLSAVRHHLDRFEYKKAYTIMKKHRINMNLLYDHNPTLFLNHITDFIQQIDHVTDLNIIVTGLQEEDVTVTMYTAAYQQ 717
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A2C9M037_BIOGL (Elongator complex protein 1 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9M037_BIOGL) HSP 1 Score: 145 bits (365), Expect = 5.510e-37 Identity = 73/165 (44.24%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 1 VASFECSRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLF 495
V + E + C SF VHNEFLL TT S ++R I A Q ++L T+ H +D + R+VE GS+I+ +V +S++V+LQMPRGNLETI+PRAL+LS+ + + + + AF MR HR++LNLL D P F +++ I+Q+D+P ++V ++ L E DVT+T++
Sbjct: 614 VNNTEIASNCTSFKVHNEFLLLTTFSHTIRCISRACQLNDLSSLSDTKSHPFDESIRRVERGSQIINIVANSTKVILQMPRGNLETIHPRALVLSSLKHLMDSDKMLEAFLMMRTHRINLNLLHDHNPSHFLSHIDQFIRQVDSPAHLNVLLTDLMEEDVTQTMY 778
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Match: A0A507EE61_9FUNG (Elongator complex protein 1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EE61_9FUNG) HSP 1 Score: 145 bits (365), Expect = 5.520e-37 Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 1
Query: 19 SRECNSFAVHNEFLLFTTMSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRVVLQMPRGNLETIYPRALLLSTCRQ*LKAGEYGTAFREMRRHRVDLNLLCDFEPRAFEENLESVIKQIDNPQQISVFVSGLREADVTRTLF 495
S +C SF VHN+FL+ TT + + R I N SE L T +D R+VE GS+IV VP + +VLQMPRGNLET+YPRAL+L+ R+ + +Y TAF R+HR+DLN L D + + FE+N+E+ + +D+P +++F+S LR+ DVT T++
Sbjct: 627 SSDCTSFHVHNDFLILTTFTHTARFIS-LNVPLSEFKLVDTSASPFDEHVRRVERGSKIVIAVPSDTSLVLQMPRGNLETVYPRALVLAAVRRAISNVDYRTAFVLCRKHRIDLNFLVDCDRQGFEKNVETFVSMVDDPDYLNLFISSLRDEDVTITMY 784 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116206.3365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116206.3365.1 >prot_M-pyrifera_M_contig116206.3365.1 ID=prot_M-pyrifera_M_contig116206.3365.1|Name=mRNA_M-pyrifera_M_contig116206.3365.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp MSSSLRMIDTANQEFSEAALDTTQVHAYDTTGRQVENGSRIVAVVPHSSRback to top mRNA from alignment at M-pyrifera_M_contig116206:1..519+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116206.3365.1 ID=mRNA_M-pyrifera_M_contig116206.3365.1|Name=mRNA_M-pyrifera_M_contig116206.3365.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig116206:1..519+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116206:1..519+ >mRNA_M-pyrifera_M_contig116206.3365.1 ID=mRNA_M-pyrifera_M_contig116206.3365.1|Name=mRNA_M-pyrifera_M_contig116206.3365.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig116206:1..519+ (Macrocystis pyrifera P11B4 male)back to top |