prot_M-pyrifera_M_contig116173.3355.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig116173.3355.1
Unique Nameprot_M-pyrifera_M_contig116173.3355.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length187
Homology
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: A0A1M7ZJB6_9HYPH (Uroporphyrinogen decarboxylase n=2 Tax=Pseudoxanthobacter TaxID=433838 RepID=A0A1M7ZJB6_9HYPH)

HSP 1 Score: 235 bits (599), Expect = 8.390e-74
Identity = 123/186 (66.13%), Postives = 134/186 (72.04%), Query Frame = 0
Query:    1 YEAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRIL 186
            YEAIS VRA LPPE  L+GFAGAPWTLATYM AGRGSPDQA  R  AY DP+GF RLI + VEAVS HL+AQ  AGADAVQ+FDSWAG LD  GF  W+  P   IV+ VR A PGARIIGFPRGAG  L  +   T VDAVGLDWSV     R L     +QGNLDP+RLVAGGR LD  V+ IL
Sbjct:  140 YEAISRVRADLPPETALIGFAGAPWTLATYMVAGRGSPDQAFARLAAYRDPDGFRRLIDVLVEAVSSHLVAQFAAGADAVQVFDSWAGPLDTDGFARWTTEPMREIVQRVRSAVPGARIIGFPRGAGTRLEGFVQQTGVDAVGLDWSVSLERGRALQAVATIQGNLDPLRLVAGGRALDEGVEAIL 325          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: UPI000687C329 (uroporphyrinogen decarboxylase n=1 Tax=Amorphus coralli TaxID=340680 RepID=UPI000687C329)

HSP 1 Score: 228 bits (580), Expect = 1.970e-71
Identity = 117/186 (62.90%), Postives = 134/186 (72.04%), Query Frame = 0
Query:    1 YEAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRIL 186
            YEAI   RAALP E +L+GFAGAPWTLATYM AGR +PDQA  RR ++GDP+GF +L+   VEAVS HL+AQ+DAG DAVQIFDSWAG LD   F  WS+ P A IV NVR ARPG  II FPR AG+ L  +    R DAV LDWSV  +AAR +   + +QGNLDPMRLVAGG  LD  VD IL
Sbjct:   99 YEAIRLTRAALPDETSLIGFAGAPWTLATYMVAGRTTPDQAPARRASFGDPDGFGKLVDCLVEAVSAHLVAQIDAGCDAVQIFDSWAGTLDGLAFPRWSVDPNARIVANVRAARPGVPIIAFPRNAGSRLSGFVDAVRPDAVSLDWSVDGDAARAIQQRICIQGNLDPMRLVAGGAALDEGVDAIL 284          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: A0A327JQP1_9HYPH (Uroporphyrinogen decarboxylase n=2 Tax=Rhodobium orientis TaxID=34017 RepID=A0A327JQP1_9HYPH)

HSP 1 Score: 221 bits (563), Expect = 1.740e-68
Identity = 113/186 (60.75%), Postives = 136/186 (73.12%), Query Frame = 0
Query:    2 EAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRILD 187
            +A+  +RA+LP E TLLGF GAPWT+ATYM AGRGS DQA  RR+A+ D  GF RLI   VEA  R+L+AQ + GADAVQ+FDSWAGALD+ GFE W++ P   IV  VR   PGARIIGFP+G G +L  Y   T V+AVGLDWSVP + A++L    AVQGNLDPMRLVAGG  L + V R++D
Sbjct:  130 DAVGLIRASLPSETTLLGFCGAPWTVATYMVAGRGSSDQAPTRRVAFSDSAGFDRLIDRLVEASIRYLVAQFERGADAVQVFDSWAGALDEEGFERWAVDPMRRIVAGVRAEIPGARIIGFPKGVGMFLERYVDATGVNAVGLDWSVPLDFAKRLQKTCAVQGNLDPMRLVAGGEALKSGVRRVVD 315          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: A0A2C9DEB4_9HYPH (Uroporphyrinogen decarboxylase n=1 Tax=Hartmannibacter diazotrophicus TaxID=1482074 RepID=A0A2C9DEB4_9HYPH)

HSP 1 Score: 219 bits (558), Expect = 8.830e-68
Identity = 116/187 (62.03%), Postives = 138/187 (73.80%), Query Frame = 0
Query:    2 EAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAAR-QLPDHVAVQGNLDPMRLVAGGRGLDAAVDRILD 187
            EA+S +R ALP E TLLGF GAPWT+ATYM AGRG+PDQ   RR A G  + F  LI   VEA  R+L+AQL AGADAVQ+FDSWAGALD+ GF A++M P   IVE VR+  PGARIIGFP+GA A+L  Y   T V+AVGLDWSVPF+ AR ++   VA+QGNLDPMRL+ GG  LD  VD +L+
Sbjct:  125 EAVSRIRQALPGETTLLGFCGAPWTVATYMVAGRGTPDQGPARRAALGQRKAFTILIDRLVEASIRYLVAQLRAGADAVQVFDSWAGALDEEGFRAFAMEPMRRIVEGVRQQVPGARIIGFPKGANAFLPLYVRETGVNAVGLDWSVPFDFARNEVQKAVAIQGNLDPMRLIVGGDALDRGVDMVLE 311          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: A0A6A7Y435_9HYPH (Uroporphyrinogen decarboxylase n=1 Tax=Segnochrobactrum spirostomi TaxID=2608987 RepID=A0A6A7Y435_9HYPH)

HSP 1 Score: 218 bits (555), Expect = 2.880e-67
Identity = 114/186 (61.29%), Postives = 131/186 (70.43%), Query Frame = 0
Query:    1 YEAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRIL 186
            Y A+  VR+AL PE  L+GFAGAPWTLATYM AGRG+PDQA  R+ AY +PE F  LI + VEAVS HL+ Q  AGADA+QIFDSWAG LD   F  W++ P A IV  V+ A PG  IIGFPRG G  L A+A  T VDAVGLDW+V  N A  L   V VQGNLDP+RLV GGR LD A+D I+
Sbjct:  130 YTALREVRSALAPETALIGFAGAPWTLATYMVAGRGTPDQAFVRKAAYAEPERFQTLIDVLVEAVSEHLVNQAKAGADALQIFDSWAGNLDGDAFMRWTVAPIAEIVRRVKAAAPGVPIIGFPRGGGTRLMAFARETGVDAVGLDWTVSLNTAAVLQHSVPVQGNLDPLRLVVGGRALDEALDEIM 315          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: UPI001C3E22B1 (uroporphyrinogen decarboxylase n=1 Tax=Pinisolibacter aquiterrae TaxID=2815579 RepID=UPI001C3E22B1)

HSP 1 Score: 216 bits (551), Expect = 8.950e-67
Identity = 110/188 (58.51%), Postives = 135/188 (71.81%), Query Frame = 0
Query:    1 YEAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAAR-QLPDHVAVQGNLDPMRLVAGGRGLDAAVDRILD 187
            YEA+  +R ALPPE T LGF GAPWT+ATYM AGRG+ DQ   R+ A  DP+GF +LI + V+A   +L  Q+  GADAVQIFD+WAG LD++ FE W + PT AIV  +R   PGAR+IGFP+GA A L  Y A T VDAVG+DW++P    R +L D VAVQGNLDPMR+V GGR LD  VDR+L+
Sbjct:  120 YEAVERIRGALPPETTFLGFCGAPWTVATYMIAGRGTSDQGPARKAALRDPDGFAKLIDVLVQASIAYLARQIARGADAVQIFDTWAGVLDESEFERWVIAPTKAIVAGLRAIHPGARVIGFPKGAQALLARYVAETGVDAVGIDWTMPHAFVRAELQDKVAVQGNLDPMRVVVGGRALDEGVDRVLE 307          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: A0A2N6B6H1_9HYPH (Uroporphyrinogen decarboxylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6B6H1_9HYPH)

HSP 1 Score: 216 bits (550), Expect = 1.420e-66
Identity = 108/185 (58.38%), Postives = 134/185 (72.43%), Query Frame = 0
Query:    2 EAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRIL 186
            +A+  +RA LP E TLLGF GAPWT+ATYM  GRGSPDQA  R+  YG+P  F  LI + VEA +R+L+A L  GADAVQIFD+WAGALD+ GFE +S+ P   I+E VR+  PGA++IGFP+G G  L  Y   T VD VG+DWSVP + A++L    AVQGNLDPMR+VAGG  LD  VDR++
Sbjct:  127 KAVELIRAGLPDETTLLGFCGAPWTVATYMVGGRGSPDQAATRKKLYGEPGAFGALIDVLVEASTRYLVAHLKHGADAVQIFDTWAGALDEEGFEKYSIDPARRIIEGVRKEVPGAKVIGFPKGVGLMLERYVKETGVDGVGIDWSVPLDEAKKLQKLCAVQGNLDPMRVVAGGAALDEGVDRVM 311          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: UPI001FD91450 (uroporphyrinogen decarboxylase n=1 Tax=Bradyrhizobium sp. Tv2a-2 TaxID=113395 RepID=UPI001FD91450)

HSP 1 Score: 214 bits (546), Expect = 2.860e-66
Identity = 111/187 (59.36%), Postives = 135/187 (72.19%), Query Frame = 0
Query:    1 YEAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSV-PFNAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRIL 186
            +EA+  VRAAL PE+ L+GF GAPWT+ATYM AG G+PDQA  R +AY  P+ F ++I   VE   R+LI QLDAGADA+QIFD+WAG L    F+ WS+ PT  IVE VR+ RPGA+IIGFPRGAGA L AY A T VDAV +DW+  P    R +   VAVQGNLDP+ L+AGG  LDAA+D +L
Sbjct:  100 FEALRRVRAALAPEIALIGFCGAPWTVATYMVAGHGTPDQAPARLLAYRHPQTFAKIIDTLVENSVRYLIGQLDAGADALQIFDTWAGVLPVREFQRWSIEPTRRIVEGVRKQRPGAKIIGFPRGAGALLPAYVAATGVDAVSIDWAAEPELIRRDVQSKVAVQGNLDPLALIAGGSALDAAIDEVL 286          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: UPI00047996D7 (uroporphyrinogen decarboxylase n=1 Tax=Afifella pfennigii TaxID=209897 RepID=UPI00047996D7)

HSP 1 Score: 214 bits (545), Expect = 5.550e-66
Identity = 107/186 (57.53%), Postives = 134/186 (72.04%), Query Frame = 0
Query:    2 EAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRILD 187
            E +  VR ALP E TLLGF GAPWT+ATYM AG G+PDQ   R+++ G+PE F  L+ + VEA +R+L+AQL AGADAVQIFD+WAG LD+ GF+ W++ P   IVE VR   PGA++I FP+G GA L AYA  T  DA+GLDWSVP  AAR     +A+QGNLDPMRL+ GG  L+  V +IL+
Sbjct:  115 ETVERVRQALPAETTLLGFCGAPWTVATYMVAGSGTPDQGPARKLSMGEPEAFDALMDILVEASTRYLVAQLRAGADAVQIFDTWAGVLDEEGFKRWAIEPVRRIVEGVRAEIPGAKVIAFPKGGGARLKAYAEATGADALGLDWSVPLAAARDAVGGLALQGNLDPMRLIVGGAALENGVRQILE 300          
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Match: A0A8B2NWF2_9HYPH (Uroporphyrinogen decarboxylase n=3 Tax=Acuticoccus sediminis TaxID=2184697 RepID=A0A8B2NWF2_9HYPH)

HSP 1 Score: 214 bits (545), Expect = 5.880e-66
Identity = 117/187 (62.57%), Postives = 130/187 (69.52%), Query Frame = 0
Query:    1 YEAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGDPEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSMRPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPFNAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRILD 187
            YE IS +R ALPPE  LLGF GAPWTLATYM AG+G  +Q   R+ A  DPE F  +I L VEA SRHL+AQ  AGADA+QIFDSWA ALD+ GF  WS++    IV  VR A     IIGFPRGAGA    + A T VDAV LDWSVP + AR+L   V VQGNLDP RLVAGG  LDAAVDRI D
Sbjct:  114 YETISRLREALPPEKALLGFCGAPWTLATYMVAGKGGGEQFPARKAAARDPEAFQAIIDLLVEACSRHLVAQARAGADALQIFDSWASALDEDGFSRWSIQAIGEIVNKVR-AETNVPIIGFPRGAGAGYSRFVAETGVDAVSLDWSVPMDFARELQQRVCVQGNLDPARLVAGGPQLDAAVDRICD 299          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116173.3355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M7ZJB6_9HYPH8.390e-7466.13Uroporphyrinogen decarboxylase n=2 Tax=Pseudoxanth... [more]
UPI000687C3291.970e-7162.90uroporphyrinogen decarboxylase n=1 Tax=Amorphus co... [more]
A0A327JQP1_9HYPH1.740e-6860.75Uroporphyrinogen decarboxylase n=2 Tax=Rhodobium o... [more]
A0A2C9DEB4_9HYPH8.830e-6862.03Uroporphyrinogen decarboxylase n=1 Tax=Hartmanniba... [more]
A0A6A7Y435_9HYPH2.880e-6761.29Uroporphyrinogen decarboxylase n=1 Tax=Segnochroba... [more]
UPI001C3E22B18.950e-6758.51uroporphyrinogen decarboxylase n=1 Tax=Pinisolibac... [more]
A0A2N6B6H1_9HYPH1.420e-6658.38Uroporphyrinogen decarboxylase n=1 Tax=Hyphomicrob... [more]
UPI001FD914502.860e-6659.36uroporphyrinogen decarboxylase n=1 Tax=Bradyrhizob... [more]
UPI00047996D75.550e-6657.53uroporphyrinogen decarboxylase n=1 Tax=Afifella pf... [more]
A0A8B2NWF2_9HYPH5.880e-6662.57Uroporphyrinogen decarboxylase n=3 Tax=Acuticoccus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000257Uroporphyrinogen decarboxylase (URO-D)PFAMPF01208URO-Dcoord: 1..187
e-value: 1.3E-50
score: 172.5
IPR000257Uroporphyrinogen decarboxylase (URO-D)PROSITEPS00907UROD_2coord: 18..34
IPR038071UROD/MetE-like superfamilyGENE3D3.20.20.210coord: 1..187
e-value: 1.3E-53
score: 183.9
IPR038071UROD/MetE-like superfamilySUPERFAMILY51726UROD/MetE-likecoord: 1..187
NoneNo IPR availablePANTHERPTHR21091METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATEDcoord: 1..186
NoneNo IPR availablePANTHERPTHR21091:SF172UROPORPHYRINOGEN DECARBOXYLASE 2, CHLOROPLASTICcoord: 1..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig116173contigM-pyrifera_M_contig116173:1..561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig116173.3355.1mRNA_M-pyrifera_M_contig116173.3355.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig116173 1..561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig116173.3355.1 ID=prot_M-pyrifera_M_contig116173.3355.1|Name=mRNA_M-pyrifera_M_contig116173.3355.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
YEAISGVRAALPPEVTLLGFAGAPWTLATYMTAGRGSPDQAVPRRIAYGD
PEGFHRLIGLPVEAVSRHLIAQLDAGADAVQIFDSWAGALDQTGFEAWSM
RPTAAIVENVRRARPGARIIGFPRGAGAYLGAYAATTRVDAVGLDWSVPF
NAARQLPDHVAVQGNLDPMRLVAGGRGLDAAVDRILD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000257Uroporphyrinogen_deCOase
IPR038071UROD/MetE-like_sf