mRNA_M-pyrifera_M_contig116161.3350.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A7K2DTI6_9ACTN (Xylulose kinase n=5 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2DTI6_9ACTN) HSP 1 Score: 211 bits (536), Expect = 5.920e-63 Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 1
Query: 1 IVAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELDGRLLLIGGGARSVAFR 525
+V PGTGDNM ALG+GL GDT +S+GTSGTAY+VSTTPT+D +GAVAGFADA G +LPLV TLNAT+VTD ++ LG+DA ELAALA+ AP + VLVP+ DGERTP+ P A G L+ +R TTR LA AAH+GV+CGL +G+DALR AGVE GRL LIGGGARSVA+R
Sbjct: 238 LVGPGTGDNMGAALGLGLKSGDTVISLGTSGTAYSVSTTPTSDPTGAVAGFADAAGGYLPLVCTLNATRVTDTVSHWLGVDAAELAALALAAPENATAPVLVPYFDGERTPDLPDATGVLAALRNDTTREELALAAHDGVLCGLFEGLDALRSAGVESSGRLHLIGGGARSVAYR 412
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A7Y2GRV3_9ACTN (Xylulose kinase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GRV3_9ACTN) HSP 1 Score: 209 bits (531), Expect = 8.110e-62 Identity = 117/181 (64.64%), Postives = 139/181 (76.80%), Query Frame = 1
Query: 1 IVAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELDGRLLLIGGGARSVAFRTVVAGL 543
+VAPG+GDNM+ ALG+G+G GD +S+GTSGTAYAVS TPT+D +G VAGFADATGR+LPLV TLNATKVT+ A+L +D E LA+ AP G++G+ LVP+ DGERTPN P+A G LSG+R R +ARAA EGV CGLLDGVDAL +AGV L GR LIGGGARS AF T A L
Sbjct: 279 LVAPGSGDNMSAALGLGVGPGDLVVSLGTSGTAYAVSNTPTSDETGLVAGFADATGRYLPLVCTLNATKVTESFRALLDVDHTEFDRLAMAAPQGANGLTLVPYFDGERTPNLPNARGLLSGLRAPMNRPQIARAAVEGVTCGLLDGVDALLNAGVPLPGRFFLIGGGARSQAFATSFASL 459
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A6B1EGC3_9ACTN (Xylulose kinase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EGC3_9ACTN) HSP 1 Score: 207 bits (528), Expect = 1.220e-61 Identity = 117/178 (65.73%), Postives = 136/178 (76.40%), Query Frame = 1
Query: 4 VAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELDGRLLLIGGGARSVAFRTVVA 537
V GTGDNMA ALG+GL GD A+S+GTSGTAYAVS+ PT+D SG VAGF DA G LPLV TLNAT+VTD +A +GLD ELAA A+ +P G+ G V+VP+LDGERTPN P A G L G+ ST+RA LARAAHEGVVC LLDG+DAL AG + GRL L+GGGARS A+R V A
Sbjct: 234 VGAGTGDNMAAALGMGLQPGDIAVSLGTSGTAYAVSSEPTHDPSGVVAGFCDAAGGFLPLVCTLNATRVTDAVARWIGLDREELAAAALSSPPGAGGAVMVPYLDGERTPNLPEATGSLYGLDFSTSRADLARAAHEGVVCALLDGIDALAAAGASVGGRLHLVGGGARSPAYRRVAA 411
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A6N8Y9N4_9ACTN (Xylulose kinase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8Y9N4_9ACTN) HSP 1 Score: 206 bits (525), Expect = 3.540e-61 Identity = 115/178 (64.61%), Postives = 135/178 (75.84%), Query Frame = 1
Query: 4 VAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELDGRLLLIGGGARSVAFRTVVA 537
V GTGDNMA ALG+GLG GD A+S+GTSGTAYAVS TPT+DA+GAVAGF DA G LPLV TLNAT+VTD +A LGLD + A A+ +P G+ G V+VP+LDGERTPN P A G L G+ T+ A LARA+HEGVVC LLDGVDAL AG + GRL L+GGGARS A+R + A
Sbjct: 233 VGAGTGDNMAAALGMGLGPGDVAVSLGTSGTAYAVSATPTHDATGAVAGFCDAAGAFLPLVCTLNATRVTDAVARWLGLDRGQFATAALSSPPGAGGAVMVPYLDGERTPNLPEAAGSLYGLGFDTSPADLARASHEGVVCALLDGVDALAEAGASVGGRLNLVGGGARSPAYRQIAA 410
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A7Y2IIX5_9ACTN (Xylulose kinase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IIX5_9ACTN) HSP 1 Score: 206 bits (523), Expect = 4.420e-61 Identity = 115/182 (63.19%), Postives = 138/182 (75.82%), Query Frame = 1
Query: 1 IVAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELDGRLLLIGGGARSVAFRTVVAGLA 546
IV PG+GDNMA ALG+ GD A+S+GTSGTAYAVS TPT D +G VAGFADATG +LPLV TLNATKVT+ + +LG+D E LA A G++G++LVP+ DGERTPN+P A G LSG+R+S +R LA+AA EGV CGLLDGVDAL + G+ LDGR LIGGGARS A+R A LA
Sbjct: 236 IVGPGSGDNMAAALGLXXXPGDLAVSLGTSGTAYAVSPTPTEDPTGIVAGFADATGNYLPLVCTLNATKVTETIRGLLGVDHEEFDELARQAALGANGLILVPYFDGERTPNKPTATGALSGLRSSVSRGDLAQAAIEGVTCGLLDGVDALMNNGIVLDGRFFLIGGGARSAAYRHAFAALA 417
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A6G0A2C2_9ACTN (Xylulose kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A2C2_9ACTN) HSP 1 Score: 205 bits (521), Expect = 9.370e-61 Identity = 117/182 (64.29%), Postives = 140/182 (76.92%), Query Frame = 1
Query: 1 IVAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELD-GRLLLIGGGARSVAFRTVVAGL 543
+V PGTGDNMA ALG GL GD A+S+GTSGT Y+V+ PT D SG VAGFADA+GR LPLV TLNAT VTD +A LG D L ALA+ A AG+ G L+P+L GERTP+RP A G L+G+RTSTT + +ARAAHEGVVCGLLDG+DALR A V+ GRLLL+GGG+RS A+R ++A L
Sbjct: 237 LVGPGTGDNMAAALGAGLQPGDVALSLGTSGTVYSVTNRPTVDRSGQVAGFADASGRFLPLVCTLNATLVTDLIAGWLGTDHAGLTALALQAAAGAAGTTLLPYLAGERTPDRPDATGVLAGLRTSTTSSDIARAAHEGVVCGLLDGLDALRSAAVDTARGRLLLVGGGSRSEAYRRIIADL 418
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A354B8E9_9ACTN (Xylulose kinase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B8E9_9ACTN) HSP 1 Score: 200 bits (508), Expect = 1.170e-60 Identity = 114/180 (63.33%), Postives = 132/180 (73.33%), Query Frame = 1
Query: 4 VAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELDGRLLLIGGGARSVAFRTVVAGL 543
V PG+GDNMA ALG+GL GD A+S+GTSG YA S TPT D SGAVAGFADATG +LPLV TLNATKVTD +A LG+D AA A+DAPAG+ G L P+ DGERTPN P G G+R TT A LARAAHEGV+ GLL G +AL AG +DGR+ LIGGGARS A+R ++A L
Sbjct: 96 VGPGSGDNMAAALGLGLTTGDVALSLGTSGVVYAASPTPTADPSGAVAGFADATGGYLPLVCTLNATKVTDTVAGWLGMDHETFAAAALDAPAGAHGARLTPYFDGERTPNLPDETGTFEGLRNDTTSADLARAAHEGVLRGLLFGREALAAAGAAVDGRVHLIGGGARSPAYRQILADL 275
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A7K2CT00_9ACTN (Xylulose kinase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2CT00_9ACTN) HSP 1 Score: 204 bits (519), Expect = 1.980e-60 Identity = 115/175 (65.71%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 IVAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELDGRLLLIGGGARSVAFR 525
+V PGTGDNM ALG+GL GD +S+GTSGTAY+VS TPTND SGAVAGFADA G +LPLV TLNAT+VTD +A LG+DA LA LA+ D VLVP+ DGERTP+ P A G L+G+R TTR LA AAH+GV+CGL DG+DALR AGV DGRL LIGGGARS A+R
Sbjct: 238 LVGPGTGDNMGAALGLGLQPGDAVISLGTSGTAYSVSRTPTNDPSGAVAGFADAAGGYLPLVCTLNATRVTDTVAQWLGVDAAGLAELALACDDSPDSPVLVPYFDGERTPDLPDAAGVLAGLRNDTTREELALAAHDGVLCGLFDGLDALRTAGVVADGRLHLIGGGARSAAYR 412
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A538JPP9_9ACTN (Xylulose kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JPP9_9ACTN) HSP 1 Score: 204 bits (518), Expect = 2.140e-60 Identity = 116/181 (64.09%), Postives = 139/181 (76.80%), Query Frame = 1
Query: 4 VAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDALRHAGVELD-GRLLLIGGGARSVAFRTVVAGL 543
VAPGTGDNMA ALG+GL GD A+S+GTSGT ++VS P DASG VAGFADA GR LPLV TLNA +V D A +LG+D LA++A G+ G+VL+P+LDGERTPNRP A G L+G+RT T A +ARAA EGVVCGLLDG+DAL+ GV++D GRL L+GGGARS A RT+VA L
Sbjct: 219 VAPGTGDNMAAALGLGLAPGDVAISLGTSGTVFSVSERPVADASGEVAGFADAAGRFLPLVCTLNAARVVDAFARLLGVDLAGFDRLALEARDGARGLVLLPYLDGERTPNRPDATGVLAGLRTDVTPAQVARAAIEGVVCGLLDGLDALKGVGVDVDTGRLALVGGGARSTAVRTIVASL 399
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Match: A0A7K0WRA1_9ACTN (Xylulose kinase n=3 Tax=root TaxID=1 RepID=A0A7K0WRA1_9ACTN) HSP 1 Score: 202 bits (515), Expect = 6.380e-60 Identity = 111/182 (60.99%), Postives = 143/182 (78.57%), Query Frame = 1
Query: 1 IVAPGTGDNMAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLPLVATLNATKVTDWMAAMLGLDAPELAALAVDAPAGSDGVVLVPHLDGERTPNRPHANGELSGVRTSTTRAALARAAHEGVVCGLLDGVDAL-RHAGVELDGRLLLIGGGARSVAFRTVVAGL 543
+VAPGTGDNMA ALGIGL + A+S+GTSGT +AVS P +D +GAVAGFADATG++LPLV TLNATKVTD ++ + GLD EL A A+ +PAG+ G+ L+P+LDGERTPNRP A+G++ G+RT TT + LARA EGV+CGLLDG+D L +HA + GR+ L+GGGA S A+R ++A L
Sbjct: 235 LVAPGTGDNMAAALGIGLSASEVAISLGTSGTVFAVSEHPCSDETGAVAGFADATGKYLPLVCTLNATKVTDTLSRLCGLDLAELDAAALASPAGAGGLTLLPYLDGERTPNRPTASGQIKGLRTDTTVSQLARAGFEGVICGLLDGLDELSKHA--DTSGRVFLVGGGAHSAAYRQILADL 414 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116161.3350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116161.3350.1 >prot_M-pyrifera_M_contig116161.3350.1 ID=prot_M-pyrifera_M_contig116161.3350.1|Name=mRNA_M-pyrifera_M_contig116161.3350.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp MAGALGIGLGIGDTAMSIGTSGTAYAVSTTPTNDASGAVAGFADATGRHLback to top mRNA from alignment at M-pyrifera_M_contig116161:9..554- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116161.3350.1 ID=mRNA_M-pyrifera_M_contig116161.3350.1|Name=mRNA_M-pyrifera_M_contig116161.3350.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig116161:9..554- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116161:9..554- >mRNA_M-pyrifera_M_contig116161.3350.1 ID=mRNA_M-pyrifera_M_contig116161.3350.1|Name=mRNA_M-pyrifera_M_contig116161.3350.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig116161:9..554- (Macrocystis pyrifera P11B4 male)back to top |