mRNA_M-pyrifera_M_contig116085.3345.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A7S2WCX6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WCX6_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.250e-29 Identity = 54/85 (63.53%), Postives = 72/85 (84.71%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPID 255
YR+GTS ++A++TLYKEGG+RRFYRG+GPAL+QGP++R GD AAN GMLSLLNS +++R PV KT A+FAAG +R+ +MP+D
Sbjct: 99 YRYGTSTKVALQTLYKEGGIRRFYRGVGPALIQGPMSRFGDTAANAGMLSLLNSQESTRDLPVAAKTACASFAAGLWRVFLMPVD 183
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A059LM40_9CHLO (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LM40_9CHLO) HSP 1 Score: 109 bits (272), Expect = 7.650e-27 Identity = 53/86 (61.63%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPIDA 258
YR+GT+ +A++TLYKEGGV RFYRG+GPAL+QGPL+R GD AAN G+L+LLN ++R P+ LKT A+ AAG FRI +MP+DA
Sbjct: 100 YRYGTTTTVALKTLYKEGGVVRFYRGLGPALVQGPLSRFGDTAANAGVLTLLNEHSSTRDMPIALKTAAASAAAGGFRIFLMPVDA 185
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A383WF37_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WF37_TETOB) HSP 1 Score: 110 bits (274), Expect = 1.050e-26 Identity = 54/86 (62.79%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPIDA 258
YR GTS +A+RTLY++GG+ RFY+G+GPALLQGPL R GD AAN G+LSLLN LDA+R PV LKT A+ AGA+R++++P+DA
Sbjct: 146 YRFGTSTSVALRTLYRDGGIVRFYQGVGPALLQGPLCRFGDTAANAGVLSLLNELDATRNLPVGLKTACASATAGAWRMLLLPLDA 231
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: D8U796_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U796_VOLCA) HSP 1 Score: 107 bits (268), Expect = 8.540e-26 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPID 255
YR+GT A RTLYKEGG+ RFYRG+GPAL+QGPL+R GD AAN G L+LL+S ++S+ PV +KT A+ AAGAFRI++MP+D
Sbjct: 116 YRYGTDTMTAFRTLYKEGGIPRFYRGLGPALIQGPLSRFGDTAANAGTLALLDSYESSKGLPVGVKTLVASSAAGAFRILLMPVD 200
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A7S2A6F7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6F7_TRICV) HSP 1 Score: 104 bits (260), Expect = 1.910e-25 Identity = 51/87 (58.62%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPIDAV 261
YR+GTS +A+RTLY +GG+ RFYRG+ PAL+QGPL+R GD AAN G+L+L+NS+DA++ V KT A+ AA AFRI +MP+D V
Sbjct: 53 YRNGTSFPVALRTLYADGGIPRFYRGVAPALIQGPLSRFGDTAANTGVLTLMNSMDATKDLSVGFKTVAASGAAAAFRIFLMPVDTV 139
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A836BP93_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BP93_9CHLO) HSP 1 Score: 105 bits (263), Expect = 2.180e-25 Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPIDAV 261
YR+GT M A+RTLYKEGGV RFYRG+ PAL+QGP++R GD AAN G L+LL+S ++SR P +KT A+ AAGAFRI++MP+D V
Sbjct: 75 YRYGTDMTTALRTLYKEGGVPRFYRGLLPALVQGPMSRFGDTAANAGTLALLDSYESSRTLPSGVKTLAASAAAGAFRILLMPVDTV 161
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A7S4L3W1_9EUKA (Hypothetical protein n=2 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L3W1_9EUKA) HSP 1 Score: 107 bits (266), Expect = 2.450e-25 Identity = 55/87 (63.22%), Postives = 71/87 (81.61%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPIDAV 261
YR+GTS + AM+ LYKEGG+RRFY+G ALLQGPL+R GD AAN G+L+LL+S+D++R PV +KT FA+ AA A+RIV+MPID V
Sbjct: 233 YRYGTSTKEAMKKLYKEGGIRRFYKGYPAALLQGPLSRFGDTAANVGVLTLLDSMDSTRNLPVGIKTFFASSAAAAWRIVLMPIDTV 319
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A2R5GDU3_9STRA (Solute carrier family 25 member 38-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDU3_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.420e-25 Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPIDA 258
YR+G +MR A TLYKEGG+RRFYRG+GP L QGPL+R GD A+N GML+LL+S + + PV +KT A+F+A FRI +MPIDA
Sbjct: 103 YRNGGTMREAFSTLYKEGGIRRFYRGVGPGLFQGPLSRFGDTASNAGMLALLDSSETTATLPVAVKTAAASFSAATFRIFLMPIDA 188
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A7S1LE74_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1LE74_NEODS) HSP 1 Score: 103 bits (258), Expect = 4.410e-25 Identity = 53/88 (60.23%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 1 YRHG-TSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPIDAV 261
YRHG TSM A++TLYKEGG+RR Y G+ AL+Q PL+R GD AAN GMLSL+ +LD + PV++KT FA+ AG+FRI++MP+DAV
Sbjct: 55 YRHGGTSMIQALKTLYKEGGIRRLYSGVSVALVQAPLSRFGDTAANAGMLSLVENLDGLKDLPVQVKTVFASVGAGSFRIMLMPVDAV 142
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Match: A0A5A8BYU3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BYU3_CAFRO) HSP 1 Score: 103 bits (257), Expect = 6.520e-25 Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 1 YRHGTSMRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDASRPWPVELKTTFAAFAAGAFRIVIMPID 255
YRHGT+ R A+R LY EGGVRRFYRG+ PAL QGPL+R GD AAN GML+LL+ D++R PV KT A+ AA +RI +MPID
Sbjct: 54 YRHGTTTRQALRKLYAEGGVRRFYRGLAPALFQGPLSRFGDTAANAGMLALLDHYDSTRSLPVAAKTAAASTAAALWRICLMPID 138 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116085.3345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116085.3345.1 >prot_M-pyrifera_M_contig116085.3345.1 ID=prot_M-pyrifera_M_contig116085.3345.1|Name=mRNA_M-pyrifera_M_contig116085.3345.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp MRIAMRTLYKEGGVRRFYRGIGPALLQGPLARGGDAAANEGMLSLLNSLDback to top mRNA from alignment at M-pyrifera_M_contig116085:79..339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116085.3345.1 ID=mRNA_M-pyrifera_M_contig116085.3345.1|Name=mRNA_M-pyrifera_M_contig116085.3345.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=261bp|location=Sequence derived from alignment at M-pyrifera_M_contig116085:79..339+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116085:79..339+ >mRNA_M-pyrifera_M_contig116085.3345.1 ID=mRNA_M-pyrifera_M_contig116085.3345.1|Name=mRNA_M-pyrifera_M_contig116085.3345.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig116085:79..339+ (Macrocystis pyrifera P11B4 male)back to top |