mRNA_M-pyrifera_M_contig116054.3336.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A843UPK2_COLES (ABC1 domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UPK2_COLES) HSP 1 Score: 128 bits (321), Expect = 6.930e-34 Identity = 71/126 (56.35%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 4 VRTHADVMPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAY 381
VR ADVMPR+QL L++ELG ++ FD EP+AAASIGQVHRA + +G VAVK+QYPGVA S+ESD+ N+RRLL D +PKGLFLD ++VAKEELS EC+YE EA +Q+ +
Sbjct: 104 VRQGADVMPRSQLNNVLDTELGPEWS----SKLSSFDYEPLAAASIGQVHRAVMKNGLEVAVKIQYPGVANSIESDIENVRRLL---DYTNLIPKGLFLDRAIKVAKEELSRECDYELEAANQKKF 222
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A2P2JES8_RHIMU (Ubiquinone biosynthesis protein coq-8 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JES8_RHIMU) HSP 1 Score: 130 bits (326), Expect = 1.390e-32 Identity = 72/133 (54.14%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 4 VRTHADVMPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAYARELREA 402
VR ADVMPR+QL + L +ELG T+ FD EP+AAASIGQVHRA + DGR VA+K+QYPGVA+S+ESD+ N++ LL D +PKGL+LD ++VAKEELS EC+YE EA +Q+ + L +A
Sbjct: 249 VRQGADVMPRSQLNQVLNAELGPDWS----TKLTSFDYEPLAAASIGQVHRAVIKDGRQVAMKIQYPGVADSIESDIENVKLLL---DYTNLIPKGLYLDRAIKVAKEELSRECDYELEASNQKRFCNLLSDA 374
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A1D1YJG4_9ARAE (Chaperone activity of bc1 complex-like, mitochondrial n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YJG4_9ARAE) HSP 1 Score: 129 bits (325), Expect = 2.300e-32 Identity = 72/126 (57.14%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 4 VRTHADVMPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAY 381
VR ADVMPR+QL K L+SELG ++ FD EP+AAASIGQVHRA + +G VAVK+QYPGVA S+ESD+ N+RRLL D +PKGLFLD ++VAKEELS EC+Y+ EA +Q+ +
Sbjct: 293 VRQGADVMPRSQLNKVLDSELGPEWS----SKLRSFDYEPLAAASIGQVHRAVMKNGLEVAVKIQYPGVANSIESDIENVRRLL---DYTNLIPKGLFLDRAIKVAKEELSRECDYQLEAANQKRF 411
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A024GRQ5_9STRA (ABC1 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRQ5_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.310e-32 Identity = 70/127 (55.12%), Postives = 93/127 (73.23%), Query Frame = 1
Query: 1 RVRTHADVMPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAY 381
RVR +A+VMP+AQL LE+ELG+S + F FD P+AAASIGQVHRA L G VA+KVQYPGVAES+ESDL NL+RL+ + LP+GL++D I+ V KEEL+ EC+Y+ EA++Q+ +
Sbjct: 307 RVRQNANVMPKAQLHAQLETELGQSWS----SHFKEFDDNPIAAASIGQVHRAILTSGDRVAIKVQYPGVAESIESDLTNLKRLVTYTNI---LPRGLYIDEIIRVGKEELTLECDYKSEAKNQDYF 426
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A0K9PAA3_ZOSMR (ABC1 protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PAA3_ZOSMR) HSP 1 Score: 128 bits (322), Expect = 4.710e-32 Identity = 73/127 (57.48%), Postives = 90/127 (70.87%), Query Frame = 1
Query: 4 VRTHADVMPRAQLQKALESELGESGGGSDGTE-FVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAY 381
VR ADVMPR QL L +ELG SD T + FD EP+A+ASIGQVHRA D +VA+K+QYPGVA+S++SD+ N+RRLL D LPKGLFLD ++VAKEELS EC+YE EAR Q+ +
Sbjct: 253 VRQGADVMPRTQLNNVLVAELG-----SDWTHNLISFDYEPLASASIGQVHRAVTNDDLVVAMKIQYPGVADSIDSDIENVRRLL---DYSNILPKGLFLDRAIKVAKEELSLECDYELEARSQKRF 371
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A7R9UJX0_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UJX0_DIALT) HSP 1 Score: 122 bits (307), Expect = 1.390e-31 Identity = 76/136 (55.88%), Postives = 92/136 (67.65%), Query Frame = 1
Query: 1 RVRTHADVMPRAQLQKALESELGESGGGSDGTEFV-GFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAYARELREAL 405
+VR A++MP AQL + SELG +D E V F P+AAASIGQVHR L DGRL A+KVQYPGVA SV+SDLANLRRL GALPK LF+D+I++VA++EL AEC+Y EA E Y LR A+
Sbjct: 126 KVRASANIMPAAQLHTTISSELG-----TDWRERVRSFQETPLAAASIGQVHRVVLRDGRLAALKVQYPGVAASVDSDLANLRRL---AHYTGALPKTLFVDNIIKVARDELLAECDYVAEAASTERYGELLRCAM 253
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A2C9VS92_MANES (ABC1 domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VS92_MANES) HSP 1 Score: 127 bits (318), Expect = 1.820e-31 Identity = 70/133 (52.63%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 4 VRTHADVMPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAYARELREA 402
VR ADVMPR+QL + L+SELG T+ FD EP+AAASIGQVH+A DG LVA+K+QYPGVA S++SD+ N++ LL D +PKGL+L+ ++VAKEELS EC+YE EA +Q+ + + L +A
Sbjct: 254 VRQGADVMPRSQLNRVLDSELGSDWS----TKLTSFDYEPIAAASIGQVHQAVTKDGMLVAMKIQYPGVANSIDSDIENVKLLL---DYTNLIPKGLYLERAMKVAKEELSRECDYELEATNQKRFRKLLSDA 379
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A6H5JPB9_9PHAE (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB9_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.330e-31 Identity = 71/127 (55.91%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 1 RVRTHADVMPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAY 381
RVR ADVMP QL + LE LG ++ FD P+AAASIGQVHRAKLPDG VA+K+QYPGVA+SVESDL NL+RL+ L + LP GL+++ I+ VA+EEL EC+YE EA +QE +
Sbjct: 333 RVRQGADVMPLKQLHRQLEKNLGMDWR----SKLAAFDETPIAAASIGQVHRAKLPDGTDVAMKIQYPGVADSVESDLKNLQRLVQLTNI---LPPGLYIEEIIRVAREELGEECDYEREAANQERF 452
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A6I9SDF9_ELAGV (protein ABC transporter 1, mitochondrial n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9SDF9_ELAGV) HSP 1 Score: 126 bits (317), Expect = 2.610e-31 Identity = 70/126 (55.56%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 4 VRTHADVMPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAY 381
VR ADVMPR+QL + L++ELG ++ FD EP+AAASIGQVHRA + DG VA+K+QYPGVA+S+ESD+ N+RRLL D +PKGLFLD ++VAKEELS EC+Y EA +Q+ +
Sbjct: 265 VRQGADVMPRSQLNEVLDAELGPDWS----SKLRSFDYEPLAAASIGQVHRAVMKDGLEVAMKIQYPGVADSIESDIENVRRLL---DYTNLIPKGLFLDKAMKVAKEELSRECDYVLEATNQKRF 383
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Match: A0A7S0DKU6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DKU6_9EUKA) HSP 1 Score: 123 bits (309), Expect = 2.750e-31 Identity = 67/127 (52.76%), Postives = 91/127 (71.65%), Query Frame = 1
Query: 1 RVRTHADVMPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGRLVAVKVQYPGVAESVESDLANLRRLLVLGDTGGALPKGLFLDSIVEVAKEELSAECEYEEEARHQEAY 381
RVRT A+VMP+ QL + + S G + +F FD +PVA ASIGQVH+A DG VAVKVQYPGVA +++D+ANL+RL++LG G +PKGLFLD+++ AKEEL+ EC+Y EA++QE +
Sbjct: 14 RVRTEANVMPKWQLDEVMSSSFGSNWK----QQFKEFDEDPVAGASIGQVHQATTLDGVQVAVKVQYPGVARGIDADMANLQRLMLLG---GFVPKGLFLDNVLATAKEELTLECDYLREAKNQERF 133 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116054.3336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116054.3336.1 >prot_M-pyrifera_M_contig116054.3336.1 ID=prot_M-pyrifera_M_contig116054.3336.1|Name=mRNA_M-pyrifera_M_contig116054.3336.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp MPRAQLQKALESELGESGGGSDGTEFVGFDLEPVAAASIGQVHRAKLPDGback to top mRNA from alignment at M-pyrifera_M_contig116054:3..467+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116054.3336.1 ID=mRNA_M-pyrifera_M_contig116054.3336.1|Name=mRNA_M-pyrifera_M_contig116054.3336.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig116054:3..467+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116054:3..467+ >mRNA_M-pyrifera_M_contig116054.3336.1 ID=mRNA_M-pyrifera_M_contig116054.3336.1|Name=mRNA_M-pyrifera_M_contig116054.3336.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig116054:3..467+ (Macrocystis pyrifera P11B4 male)back to top |