mRNA_M-pyrifera_M_contig11603.3332.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11603.3332.1
Unique NamemRNA_M-pyrifera_M_contig11603.3332.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 641 bits (1653), Expect = 1.100e-224
Identity = 331/515 (64.27%), Postives = 386/515 (74.95%), Query Frame = 1
Query:    1 LLCLLYAMHAQGTMRGFASFFLLLVASVGITTGHVVNVNQHQHHESRALSARNEANGVDLFYRRLDPLPRQCCGMCTQIILNPVVVLLLVKFGNDDGGRLNPFVPG-NPRVAIIIRITLLYTDNKAVDTTQQLTLVFDVVVQPDDWNTTPCSFLQEDC*VFQNDEIVMFAPDIPGPNGRAVVSLEALNQFTADSDVNVISTTCDVRCDSFNTECTAAEDAVDGADLDPAGPGTLFGTPVQTTFFNGFCPTSIFDDPHVNGLRGQRYDWRGEDGGWYAFLSIKDQLQMNLRVTSHLPTTFPERQLVTGVAIVTEGGHTITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGREEMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNA-RRSLRSAGSVASIFDWLLADSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNLSLRVNVGINSEEEQTLQDGRVVPTASFWQMDVRVEDAEGLATAKGML 1539
            +L L + M  Q TMRGF  F LLL   V  +TGH VNV QH     RALSA  EAN +DLFYRRLDP P QCCGMCTQ+ LN  +V LLV   + + G LNP V G      III +T+++TDN A D ++    VF+VV+ PDDW   PCS+L++DC VF+NDE+ MFAPD PG  G A +SL+A+N+  A++D+NVIST C + C++ + +C +        DLDPA  G  FG   Q+ F NGFC   I+DDPH+ GLRGQ +DW G+DGGWYAFLS  DQLQMNLRVTSHLP TFPERQLVTGVA+VTEGGHTIT DIVDPLDLAPTC  + DA  S     PCLVNGGLR+TVDGRE++ GAGEY FDG IHIT VNLP ECQRFGDY+MWG+L  EQ+L    RSLRSA +V   FDWL+ADSVMIAP WCVKYLKELNGDV ALA ++S+HAVLRI +PNLSLRVNVGIN+E EQTLQDGRVVPTASFWQMDVRVE AEG+ATAKGML
Sbjct:    4 ILRLSHLMQVQKTMRGFTPFVLLLATKVDFSTGHAVNVLQHD--GRRALSAVEEANDLDLFYRRLDPGPGQCCGMCTQLTLNSRIVELLVSGDDANAGDLNPAVLGAGASFNIIIIMTIVFTDNAAADPSKVEMNVFEVVITPDDWTDVPCSYLEDDCVVFENDELFMFAPDAPG--GFATLSLDAVNEINANTDINVISTKCTLVCENAS-DCDS--------DLDPADDGVDFGVIQQSMFNNGFCTPRIWDDPHLTGLRGQHFDWYGQDGGWYAFLSTPDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGSA----PCLVNGGLRITVDGREQLQGAGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETV---FDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQDGRVVPTASFWQMDVRVEHAEGMATAKGML 498          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 5.700e-63
Identity = 130/327 (39.76%), Postives = 194/327 (59.33%), Query Frame = 1
Query:  751 IFDDPHVNGLRGQRYDWRGEDGGWYAFLSIKDQ---LQMNLRVTSHLPTTFPERQLVTGVAIVTEGGHTITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGRE---------EMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSVASIFDWLLA-DSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNLSLRVNVGINSEEEQTLQ-DGRVVPTASFWQMDVRVE--DAEGLATAKGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEFKQLFAPEE 1683
            ++ DPH+ GLRGQR +W G DGGWY+   +KD    L +N+RVT+ LP  FP+RQL+T +AI++EG +++ +++ +P  +          G       PCL NGGLR+ VDG+E         +MP A     DG + ++  NLP EC++FG + +W  + ++  L  RR LR   S+    +W+L  D  M A  WC KY+ E +     LA++Q+NHA+ +I++P +++R+N G+N + +  L  DGRV+P   FWQMDV ++  D +  A + G+LGETA PV+ ++ G +VM G    RG VEDYRV   LG  F  L   EE
Sbjct:   12 MWGDPHMRGLRGQRINWSGVDGGWYSL--VKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVENPYTIV--------TGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVA-----DGTMTMSASNLPVECRQFGGHRIWARMYQDI-LEDRRQLRGGESLE---EWILRYDQNMPARRWCAKYIAEND-----LADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALS-GLLGETARPVYGEN-GEAVMEGSDAFRGTVEDYRVSSALGVHFALLDEKEE 311          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.380e-59
Identity = 137/375 (36.53%), Postives = 205/375 (54.67%), Query Frame = 1
Query:  637 CTAAEDAVDGADLDPAGP----GTLFGTPVQTTFFNGF--CPT--SIFDDPHVNGLRGQRYDWRGEDGGWYAFLSIKDQ---LQMNLRVTSHLPTTFPERQLVTGVAIVTEGGHTITVDIVDPLDLAPTCQVSADAGRSGSPS--LPCLVNGGLRVTVDGRE---------EMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSVASIFDWLLA-DSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNLSLRVNVGINSEEEQTLQ-DGRVVPTASFWQMDVRVE--DAEGLATAKGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEFKQLFAPEE 1683
            C + E A  G   + AG     G  F   +  T    F  CP   ++  DPH+ GLRGQR DW G DGGWY+   IKD    + +N+R+T+ LP  FP+RQL+T +A++++G H++ +++ +P  +            +G P    PCL NGGLR+ VD ++          +P A     DG + ++  NLP ECQ+FG   +W  + ++  +  RR L    S+    +W+L  D  M AP WC KY+ E +     LA++QS+HA+ +I++P +++R+N G+N +    L  DGRV+P   FWQM V ++  D +  A + G+LGETA PV+D++ G  VM G    RG +EDYRV   L   F  L   EE
Sbjct:   65 CFSRETAPTGTACEAAGCDCFIGVCFEPGLSATCEASFSVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSL--IKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKG-HSVVIEVENPYTVV----------TNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVA-----DGAMTVSSSNLPVECQQFGGDRIWARMYQDM-IEGRRELHGDESLE---EWILKYDHGMAAPGWCAKYIAEND-----LADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALS-GLLGETARPVYDEN-GQVVMEGFDAFRGTIEDYRVSDALDVHFPLLDEKEE 410          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 6.540e-59
Identity = 134/324 (41.36%), Postives = 192/324 (59.26%), Query Frame = 1
Query:  739 CP--TSIFDDPHVNGLRGQRYDWRGEDGGWYAFLSIKDQ-LQMNLRVTSHLPTTFPERQLVTGVAIVTEGGHTITVDIVDPL--DLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGREEM----PGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSVASIFDWLLADSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNLSLRVNVGINSEEEQTLQ-DGRVVPTASFWQMDVRVE----DAEGLATAKGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEFKQL 1668
            CP  + I DDPH+ GL GQ  DW G DG WY+F+   D  L++N+R+T+ LP  FP+RQLVTG+++++EG H++ +++ +P   DL   C         GSP+ PCL NGGL VTVDG + +    P  GE    GGI ++  NLP +C +FG + +W      + + ARR LR+     S  DW+L+ + M A  WC +Y+ E       L  VQS+HA+ +I +P + +R+NVGI  ++   +  DGRV+P    WQMDV +     + E L    G+LGETA PV+D+  G++VM+G    RG  EDYRV  PLG +F  L
Sbjct:  395 CPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEG-HSLVLEVTNPYSTDLNDGCP-------DGSPT-PCLANGGLSVTVDGEKNVGLIHPIRGEI-LPGGIEVSADNLPVQCWQFGGHKIWAR--HYEAILARRKLRAQ----SFEDWVLSFTDMAAHDWCTEYISE-----KGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALT---GILGETARPVYDED-GHAVMAGDDAYRGTPEDYRVSGPLGMDFALL 693          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.220e-55
Identity = 117/318 (36.79%), Postives = 168/318 (52.83%), Query Frame = 1
Query:  751 IFDDPHVNGLRGQRYDWRGEDGGWYAFLSIKDQLQMNLRVTSHLPTTFPERQLVTGVAIVTEGGHTITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGRE----EMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWG-NLGEEQKLNARRSLRSAGSVASIFDWLLADSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNLSLRVNVGINSEEEQTLQDGR--VVPTASFWQMDVRVEDAEGLATAKGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEFKQLFAPEE 1683
            +  D H+ GL GQ  DW GED GWY  L +  + Q+N RVT+ +P  FP RQLV+GV+I +  G ++ V++ +P        ++ +     S S PCL  G LR+ VDG E    + P        G + ++  NLP EC+ FG   +W          + RRSLR     A   DW+L    M AP WC  + +E    ++ L+ VQSN A+LR+E+  +++RV+VG+N ++     DG   +VP   FWQ D+  E+        GMLG+TA  V D   G  + SG+  LRG VE  RV  PLG +F+Q+    E
Sbjct:    7 VSGDSHMVGLLGQEIDWYGEDSGWYCLL-VNSEFQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNP--------ITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFA---DWVLEADTMAAPGWCALFAREQR--LSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGELGGMLGDTARYVIDDD-GKPITSGMEALRGPVETCRVSGPLGVDFEQMHGAVE 309          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.130e-54
Identity = 121/316 (38.29%), Postives = 174/316 (55.06%), Query Frame = 1
Query:  751 IFDDPHVNGLRGQRYDWRGEDGGWYAFLSIKDQ---LQMNLRVTSHLPTTFPERQLVTGVAIVTEGGHTITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGREEMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSVASIFDWLLA-DSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNLSLRVNVGINSEEEQTLQ-DGRVVPTASFWQMDVRVEDAEGLATA-KGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEFKQLFAPE 1680
            I+ DPH+ GL GQR +W G DGGWY+   IKD    L +N+RVT+ LP  FP+RQL+T +AI++EG +++ +++ +P         + D G       PC  NGGLR+ VDG E                    L F  Q  G   +W  + ++  L  RR LR   S+    +W+L  D  M A  WC KY+ E +     LA++Q+NHA+ +I++P +++R+N G+N +    L  DGRV+P   FWQ+DV ++  +    A  G+ GETACPV+D++ G +VM G    RG VEDYRV   LG  F  L   E
Sbjct:   17 IWGDPHMRGLLGQRVNWSGFDGGWYSL--IKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEG-YSVVIEVKNPY--------TTDTGGCPEDVSPCHANGGLRIIVDGHE----------------VDELLRFSRQMPGGKRIWARMYQDI-LEGRRQLRGGESLE---EWILRYDQNMPARTWCAKYIAEND-----LADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDEN-GKAVMEGYDAFRGAVEDYRVSSALGVHFALLDETE 295          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 6.640e-49
Identity = 109/308 (35.39%), Postives = 167/308 (54.22%), Query Frame = 1
Query:  760 DPHVNGLRGQRYDWRGEDGGWYAFLSIKDQLQMNLRVTSHLPTTFPERQLVTGVAIVTEGG----HTITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGREEMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSVASIFDWLLADSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNLSLRVNVG----INSEEEQTLQDGRVVPTASFWQMDVRVEDAEGLATAKGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEF 1659
            DPH+ G  GQ++D+ GEDGG+YA +S    + MN+RVTS +P+  PE   +TG++++T       H+I +++ +P D+   C     AG S     PCL +G LRV ++G+EE+   G      G+ +T VNLP EC+ FG    W    E +KL   R  R  G   S+ DWLL D        C++Y+ +  G    L  +QS HA  +I +P  ++R++ G    I + +     D   +P  + WQM++ ++  E   +A G+LGET+ P  D + G  +M+G+  +RG  EDYRV  PL   F
Sbjct:   90 DPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVPS-LPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACP----AGVS-----PCLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYW----ERKKLENARHGRHLGE-QSMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFD---LPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAY-GQDIMTGMEAIRGSEEDYRVAGPLDVTF 378          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.410e-38
Identity = 98/310 (31.61%), Postives = 159/310 (51.29%), Query Frame = 1
Query:  751 IFDDPHVNGLRGQRYDWRGEDGGWYAFLSIKDQLQMNLRVTSHLPTTFPERQLVTGVAIVTEGG----HTITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGREEMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSVASIFDWLLADSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNLSLRVNVG-INSEEEQTLQDGRVVPTASFWQMDVRVEDAEGLATAKGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEFKQ 1665
            I  DPH+ G  GQ++D+ GEDGGWY+ ++  + + +N+RVTS +    PE   +TG++++T       H+I ++++DP +L  +C     AG S     PCL +G L V +DG E +   G       + ++  NLP  C+ FG    W    E +KL   R+ R   +  S+ +W+L D        CV+Y+     +   +   QS H   +I +P  ++R++ G ++    +   D   +P    WQM++ +   +    AKG+LG+T  P  D   G  +M+GL  +RG  EDYRV   LG +F Q
Sbjct:  316 ICGDPHMTGFLGQKFDFTGEDGGWYSVIADSN-MNVNMRVTSPV-ADLPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCP----AGVS-----PCLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYW----ERKKLENARAGRLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDAD-GKPIMTGLEAIRGSEEDYRVDGALGVDFVQ 609          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.080e-36
Identity = 99/306 (32.35%), Postives = 148/306 (48.37%), Query Frame = 1
Query:  760 DPHVNGLRGQRYDWRGEDGGWYAFLSIKDQLQMNLRVTSHLPTTFPERQLVTGVAIVT---EG-GHTITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGREEMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSVASIFDWLLADSVMIAPPWCVKYLKELNGD-VAALAEVQSNHAVLRIESPNLSLRVNVG-INSEEEQTLQDGRVVPTASFWQMDVRVEDAEGLATAKGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEF 1659
            DPH+ G  GQ++D+ G+DG WYA +S    L++N+RVTS +P   PE   +TG+ I T   EG  H++ + + DP  L   C V             CL +G L V +DG   +   GE     G+ I+ VNLP  C+ FG    W     E   + RR L +   +  + DW+L D        C +Y+     D  A L E  S H   +I +P  ++R++ G ++    +   D   +P    WQM++  ++ +    A G+LGET     D + GN +M G+  +RG  EDY V  PL   F
Sbjct:  140 DPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAE-PEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDSACPVQGST---------CLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYWERKKAEYVASGRR-LNNDLQMQEMSDWILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDAN-GNPIMEGMAAIRGSQEDYLVDGPLDNVF 433          
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.490e-35
Identity = 91/300 (30.33%), Postives = 145/300 (48.33%), Query Frame = 1
Query:  760 DPHVNGLRGQRYDWRGEDGGWYAFLSIKDQLQMNLRVTSHLPTTFPERQLVTGVAIVTEGG----HTITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGREEMPGAGEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSVASIFDWLLADSVMIAPPWCVKYLKE--LNGDVAALAEVQSNHAVLRIESPNLSLRVNVGINSEEEQTLQDGRVVPTASFWQMDVRVEDAEGLATAKGMLGETACPVHDKHTGNSVMSGLGVLRGDVEDYRVMH 1641
            DPH+ G  GQ++D+ G+DG WY  +S    + +N+RVT+ +P+  P+   +TG++++T+ G    H++ + + DP  L  +C              PCL NG L V++DG+E +   G       + ++VVNLP  C+ FG    W     E      R L S      + DW+L D        C +Y+    + G    L   +S HA  +I  P  ++R++ G      Q  Q G  +P  S WQM++ ++       A+G+LGET  P  D   G  VM G+  +RG  E+  + H
Sbjct:   57 DPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSR-PDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCPAGVT---------PCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAGGRRLSSKDQ--DMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHG---RLHQIAQYG--LPDHSTWQMNLAIDSDSVGVGAQGVLGETLVPTRDAD-GEYVMHGMESIRGTQEECELAH 338          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11603.3332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G544_ECTSI1.100e-22464.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMW2_ECTSI5.700e-6339.76Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JS96_9PHAE1.380e-5936.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNZ2_9PHAE6.540e-5941.36VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KYD0_9PHAE1.220e-5536.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP37_9PHAE1.130e-5438.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW46_9PHAE6.640e-4935.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF3_9PHAE2.410e-3831.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7V7_9PHAE2.080e-3632.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRS2_9PHAE1.490e-3530.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11603contigM-pyrifera_M_contig11603:5530..9219 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1686
Cds size1188
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11603.3332.1prot_M-pyrifera_M_contig11603.3332.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11603 8032..9219 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815677.2915657-UTR-M-pyrifera_M_contig11603:5529..56661622815677.2915657-UTR-M-pyrifera_M_contig11603:5529..5666Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11603 5530..5666 +
1692277517.3136005-UTR-M-pyrifera_M_contig11603:5529..56661692277517.3136005-UTR-M-pyrifera_M_contig11603:5529..5666Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11603 5530..5666 +
1622815677.3027523-UTR-M-pyrifera_M_contig11603:6030..61271622815677.3027523-UTR-M-pyrifera_M_contig11603:6030..6127Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11603 6031..6127 +
1692277517.323667-UTR-M-pyrifera_M_contig11603:6030..61271692277517.323667-UTR-M-pyrifera_M_contig11603:6030..6127Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11603 6031..6127 +
1622815677.3161185-UTR-M-pyrifera_M_contig11603:7767..80311622815677.3161185-UTR-M-pyrifera_M_contig11603:7767..8031Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11603 7768..8031 +
1692277517.3325074-UTR-M-pyrifera_M_contig11603:7767..80311692277517.3325074-UTR-M-pyrifera_M_contig11603:7767..8031Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11603 7768..8031 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815677.3258345-CDS-M-pyrifera_M_contig11603:8031..92191622815677.3258345-CDS-M-pyrifera_M_contig11603:8031..9219Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11603 8032..9219 +
1692277517.342671-CDS-M-pyrifera_M_contig11603:8031..92191692277517.342671-CDS-M-pyrifera_M_contig11603:8031..9219Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11603 8032..9219 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11603.3332.1

>prot_M-pyrifera_M_contig11603.3332.1 ID=prot_M-pyrifera_M_contig11603.3332.1|Name=mRNA_M-pyrifera_M_contig11603.3332.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=396bp
MFAPDIPGPNGRAVVSLEALNQFTADSDVNVISTTCDVRCDSFNTECTAA
EDAVDGADLDPAGPGTLFGTPVQTTFFNGFCPTSIFDDPHVNGLRGQRYD
WRGEDGGWYAFLSIKDQLQMNLRVTSHLPTTFPERQLVTGVAIVTEGGHT
ITVDIVDPLDLAPTCQVSADAGRSGSPSLPCLVNGGLRVTVDGREEMPGA
GEYHFDGGIHITVVNLPFECQRFGDYLMWGNLGEEQKLNARRSLRSAGSV
ASIFDWLLADSVMIAPPWCVKYLKELNGDVAALAEVQSNHAVLRIESPNL
SLRVNVGINSEEEQTLQDGRVVPTASFWQMDVRVEDAEGLATAKGMLGET
ACPVHDKHTGNSVMSGLGVLRGDVEDYRVMHPLGTEFKQLFAPEE*
back to top

mRNA from alignment at M-pyrifera_M_contig11603:5530..9219+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11603.3332.1 ID=mRNA_M-pyrifera_M_contig11603.3332.1|Name=mRNA_M-pyrifera_M_contig11603.3332.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3690bp|location=Sequence derived from alignment at M-pyrifera_M_contig11603:5530..9219+ (Macrocystis pyrifera P11B4 male)
TTGCTGTGCCTCCTGTACGCGATGCACGCGCAGGGCACCATGAGGGGCTT CGCGTCGTTCTTTCTTCTACTTGTCGCGAGTGTGGGCATCACCACCGGCC ATGTTGTCAACGTGAACCAGCACCAACACCACGAAAGGTGATTTATTTGC CGTGCTAACCGTGCCGCGTTTGAAAGAGGTATCCCGCGTAGTAGTTGTCA TTCTTACTGTTTCCTTTCGGTTTCCTGCTACAGCACGTGACAGTAAGCAT TTAGATATTTCCCTCTCTGTTAAACTTCACGAATGGTGGCTGAACGCTTT CGTATCTTGATACACATTTCCAACAGTTTGCCAGTAGTCTGGAACTACTA AAAATCGGCGATAACGGCCATCGGCATTCAGCATTAGAAGGAGATACTGT CTCCCGAAGGCGCAGCAGTAGTATGACAACATGTATGTTCCCTTACAATG CCCTATTTGTGCTTCCAATTCCTACTTGTATTTTGCGTCACATTATTACA GCCGCGCACTCTCGGCACGAAACGAGGCAAACGGCGTGGACCTATTCTAT CGCCGGCTAGACCCGCTGCCCCGTCAGTGCTGCGGGATGTGCACGCAGGT AAGAGACTGGTGACTGCCTGTATGGGCGTGATATTACGACCCCCTCCTTC ATGAACAACAACCTGTACTTGTATGAAACGTAGTGTGAAGGTGTTGAGCT GTTGCAAGAACACAAGGAACGAGTGCTACGATAGGAGAGGCAGCATATTT TTGCCCCGAACTATTTCTGACTGACGGGACTTTCTTAATCCAACGACGTT GGGACACTTTTAGTTTTTTTTCACAATATGGTTTCTTAGTAATACCTGCT ACAGGAGTCGTCCATCCAGTTGCACTTTCACAGAACGTAGCTTTTCTCAC CATCAGTTGTATGGGCGACATATTTACCACCTGGTATACTATTCGTACAC AGCTCCTCAAGTAAGGAGCCGCAGAAGAGTTACAGTACGCGCTATCCCCA TCCTCTGCCGCTCTACGTTCTACATTCCATTTCGCGAGTGTCTTTTTGGT ACTTGATAGGTTTCGACCAACCTTTTCGGCGTTTCTGTATGCGGGGGACA GAGGCAAATGCAATTACGGCCTGAAGTACAGTTACCGCGCATGACCCCAG CTTGGTTACACGCGACATTGCGTATACGCCGGTTTGTGCATAAGTGACCT GTACCGTAGAAAATGTCAAGGAATCTGTACCCACACGGTACCTCGATACC TGGTACAAGTACAGTTCGTGTGTACCGGGAATACGAGCAGAACGGATTGC CCAAATACTGCCATCGCTAGGGTGTTAAACAACACGTAACCCCGAGTGCA AGCGAGTGCAAGCATTATATGCAGTACAATCATCCGACGCACTTGCAGAG TATTGAATTCGGAGATACTGGGATTACCCGCAGCCTGTAGTCTCGAACAT ACTTCCGATACTTGAGAACTCCAGTTGCGTTCCCTGCCCAAACAGATTCC TCCGAATCCCGCTCCTCGGGCTATATGCGAAGGTTTTCTGCAACATGAGA TTGTAAAAATGGGCACATATGCTTGAGGTGGACGGGTATACTGCGCATCT ATTGAGAATTGATATTAGCTGACGGAAAGCTCGCGGTACTTGCAGTACCG CAGTGCAGAGCCCTGAAATGTGTGTTTAGGTATAGACAGTATCTAGAGTG TCAACCCGGAATACTGCTAGTCCCCCAAGTAACCGCAGCACTGAACCTCG AGATATTGCGAGCACTCCCTGCATCTGTAGTACATAACACCTGAAATACC GCCGTAGAGTTCACGAAGTACCTACAGTATTTTCTCTCGAAGATGCTTTC CTAAACTCTCAGATACTTGAAGCATATATGGAAATACAACACCACGTGGA ACACTCACTGATACTTGCCACGAACGGCGTGGCGCTATTGGGCTAACCTG TTTATGACTGACGGGGGTCTTTCAGCTGATGAATCCCATTCTGACGACTC CCACTGGCGGTCTAGAGAAATAATCGAATAAGACATAACCCGTAGGAGGA TTGATAGCGTACAATACACGTCGTGCAACGTTTTAAAAACGGTGAAGTGT TATCCTGGTACGACCCATTCCAGTGAAAAATCTTGTGTGTACTCTAGTGA ACACGGCAACAAGCGTTATGACGTTAACATGCAGTGATACCCAAACACGT ACACCCCTTGGCCCTCCCAATGCCTTATCCCTCTCCAGATCATCCTGAAC CCGGTAGTCGTGCTGCTTCTTGTGAAGTTCGGCAATGACGACGGTGGTCG GCTCAACCCGTTCGTCCCGGGAAATCCACGTGTCGCGATTATCATCCGTA TCACTCTACTCTACACCGACAACAAAGCCGTCGACACGACCCAGCAACTG ACGCTCGTGTTCGACGTGGTTGTTCAGCCTGACGACTGGAATACAACGCC CTGCAGCTTCCTTCAAGAGGACTGCTAAGTGTTCCAGAACGACGAGATCG TCATGTTCGCTCCGGATATCCCCGGTCCCAATGGGCGCGCTGTTGTCAGT CTGGAAGCCTTGAATCAGTTCACCGCCGATTCGGACGTGAACGTTATCAG CACCACCTGCGACGTCCGCTGCGACTCCTTCAACACCGAGTGCACTGCCG CCGAGGACGCAGTTGATGGCGCCGATCTTGATCCCGCGGGCCCTGGCACC CTGTTCGGGACCCCCGTCCAAACCACCTTCTTCAACGGCTTCTGCCCCAC TTCTATATTCGATGATCCGCACGTAAACGGACTCCGCGGCCAGCGCTACG ACTGGCGTGGTGAGGATGGCGGCTGGTACGCCTTTCTCTCCATTAAAGAC CAACTCCAGATGAACCTTCGCGTGACTTCTCACCTGCCCACGACGTTTCC CGAACGCCAACTGGTGACCGGCGTTGCAATCGTGACCGAAGGCGGCCATA CGATCACCGTGGACATCGTGGACCCCCTCGACCTCGCACCCACTTGCCAG GTCTCCGCCGACGCTGGGAGGTCCGGATCTCCCTCGCTACCTTGTCTGGT CAACGGCGGTCTGCGTGTGACTGTGGATGGGCGCGAGGAGATGCCAGGCG CCGGTGAGTACCACTTCGACGGCGGAATCCACATCACCGTCGTCAATCTC CCCTTCGAGTGCCAGCGGTTCGGCGACTACCTCATGTGGGGTAACCTCGG TGAGGAGCAGAAGCTCAACGCGAGGCGTAGTCTGCGGTCCGCTGGATCGG TCGCTTCCATCTTCGACTGGCTCCTGGCGGACTCCGTGATGATCGCCCCT CCGTGGTGCGTAAAGTACCTCAAGGAGCTCAACGGCGACGTGGCCGCCCT CGCCGAGGTTCAGTCTAACCATGCCGTGCTACGGATCGAGTCGCCTAACC TGTCCCTTCGTGTGAACGTGGGCATCAACAGCGAGGAGGAGCAGACCCTG CAGGACGGCCGTGTTGTACCTACTGCTTCGTTCTGGCAGATGGACGTGCG CGTAGAGGATGCCGAAGGCCTTGCGACCGCCAAGGGAATGCTCGGCGAGA CTGCTTGTCCCGTCCACGATAAGCACACCGGAAACTCTGTGATGTCGGGT CTCGGTGTGCTTCGTGGCGATGTGGAGGACTACAGGGTCATGCACCCGCT CGGGACCGAGTTCAAGCAGCTGTTCGCCCCGGAGGAGTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig11603:5530..9219+

>mRNA_M-pyrifera_M_contig11603.3332.1 ID=mRNA_M-pyrifera_M_contig11603.3332.1|Name=mRNA_M-pyrifera_M_contig11603.3332.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2376bp|location=Sequence derived from alignment at M-pyrifera_M_contig11603:5530..9219+ (Macrocystis pyrifera P11B4 male)
ATGTTCGCTCCGGATATCCCCGGTCCCAATGGGCGCGCTGTTGTCAGTCT
GGAAGCCTTGAATCAGTTCACCGCCGATTCGGACGTGAACGTTATCAGCA
CCACCTGCGACGTCCGCTGCGACTCCTTCAACACCGAGTGCACTGCCGCC
GAGGACGCAGTTGATGGCGCCGATCTTGATCCCGCGGGCCCTGGCACCCT
GTTCGGGACCCCCGTCCAAACCACCTTCTTCAACGGCTTCTGCCCCACTT
CTATATTCGATGATCCGCACGTAAACGGACTCCGCGGCCAGCGCTACGAC
TGGCGTGGTGAGGATGGCGGCTGGTACGCCTTTCTCTCCATTAAAGACCA
ACTCCAGATGAACCTTCGCGTGACTTCTCACCTGCCCACGACGTTTCCCG
AACGCCAACTGGTGACCGGCGTTGCAATCGTGACCGAAGGCGGCCATACG
ATCACCGTGGACATCGTGGACCCCCTCGACCTCGCACCCACTTGCCAGGT
CTCCGCCGACGCTGGGAGGTCCGGATCTCCCTCGCTACCTTGTCTGGTCA
ACGGCGGTCTGCGTGTGACTGTGGATGGGCGCGAGGAGATGCCAGGCGCC
GGTGAGTACCACTTCGACGGCGGAATCCACATCACCGTCGTCAATCTCCC
CTTCGAGTGCCAGCGGTTCGGCGACTACCTCATGTGGGGTAACCTCGGTG
AGGAGCAGAAGCTCAACGCGAGGCGTAGTCTGCGGTCCGCTGGATCGGTC
GCTTCCATCTTCGACTGGCTCCTGGCGGACTCCGTGATGATCGCCCCTCC
GTGGTGCGTAAAGTACCTCAAGGAGCTCAACGGCGACGTGGCCGCCCTCG
CCGAGGTTCAGTCTAACCATGCCGTGCTACGGATCGAGTCGCCTAACCTG
TCCCTTCGTGTGAACGTGGGCATCAACAGCGAGGAGGAGCAGACCCTGCA
GGACGGCCGTGTTGTACCTACTGCTTCGTTCTGGCAGATGGACGTGCGCG
TAGAGGATGCCGAAGGCCTTGCGACCGCCAAGGGAATGCTCGGCGAGACT
GCTTGTCCCGTCCACGATAAGCACACCGGAAACTCTGTGATGTCGGGTCT
CGGTGTGCTTCGTGGCGATGTGGAGGACTACAGGGTCATGCACCCGCTCG
GGACCGAGTTCAAGCAGCTGTTCGCCCCGGAGGAGTGAATGTTCGCTCCG
GATATCCCCGGTCCCAATGGGCGCGCTGTTGTCAGTCTGGAAGCCTTGAA
TCAGTTCACCGCCGATTCGGACGTGAACGTTATCAGCACCACCTGCGACG
TCCGCTGCGACTCCTTCAACACCGAGTGCACTGCCGCCGAGGACGCAGTT
GATGGCGCCGATCTTGATCCCGCGGGCCCTGGCACCCTGTTCGGGACCCC
CGTCCAAACCACCTTCTTCAACGGCTTCTGCCCCACTTCTATATTCGATG
ATCCGCACGTAAACGGACTCCGCGGCCAGCGCTACGACTGGCGTGGTGAG
GATGGCGGCTGGTACGCCTTTCTCTCCATTAAAGACCAACTCCAGATGAA
CCTTCGCGTGACTTCTCACCTGCCCACGACGTTTCCCGAACGCCAACTGG
TGACCGGCGTTGCAATCGTGACCGAAGGCGGCCATACGATCACCGTGGAC
ATCGTGGACCCCCTCGACCTCGCACCCACTTGCCAGGTCTCCGCCGACGC
TGGGAGGTCCGGATCTCCCTCGCTACCTTGTCTGGTCAACGGCGGTCTGC
GTGTGACTGTGGATGGGCGCGAGGAGATGCCAGGCGCCGGTGAGTACCAC
TTCGACGGCGGAATCCACATCACCGTCGTCAATCTCCCCTTCGAGTGCCA
GCGGTTCGGCGACTACCTCATGTGGGGTAACCTCGGTGAGGAGCAGAAGC
TCAACGCGAGGCGTAGTCTGCGGTCCGCTGGATCGGTCGCTTCCATCTTC
GACTGGCTCCTGGCGGACTCCGTGATGATCGCCCCTCCGTGGTGCGTAAA
GTACCTCAAGGAGCTCAACGGCGACGTGGCCGCCCTCGCCGAGGTTCAGT
CTAACCATGCCGTGCTACGGATCGAGTCGCCTAACCTGTCCCTTCGTGTG
AACGTGGGCATCAACAGCGAGGAGGAGCAGACCCTGCAGGACGGCCGTGT
TGTACCTACTGCTTCGTTCTGGCAGATGGACGTGCGCGTAGAGGATGCCG
AAGGCCTTGCGACCGCCAAGGGAATGCTCGGCGAGACTGCTTGTCCCGTC
CACGATAAGCACACCGGAAACTCTGTGATGTCGGGTCTCGGTGTGCTTCG
TGGCGATGTGGAGGACTACAGGGTCATGCACCCGCTCGGGACCGAGTTCA
AGCAGCTGTTCGCCCCGGAGGAGTGA
back to top