mRNA_M-pyrifera_M_contig116015.3329.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: L8H417_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H417_ACACA) HSP 1 Score: 98.2 bits (243), Expect = 1.930e-20 Identity = 53/154 (34.42%), Postives = 87/154 (56.49%), Query Frame = 1
Query: 106 QGVQLMSALAVVLWFFSGGIGGLTMLMDKDLTLSNIVNEDWMQKTSTGAELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEA--SLSRGEKTRMFAIAGVITGLIPLVHAHSFVAIGVVALTYCFLHPMKMFNMTSQGHFWSWMAFG 561
+G + LAV + FSGG+G + + +T S +V+ D+ Q G EL+WF +I+HV++PQR A+F YP +++FI ++T SL+ EK R+F +AG++ G++P AHS++ + V Y K N +F +W+ FG
Sbjct: 252 EGSKAAGWLAVAFFCFSGGVGFFSWIHKHGMTWSGLVDNDFAQHWEYG-ELFWFQTITHVLVPQRPALFGYPGVLMIFILLWTATSAPLCHSLTLKEKKRIFIVAGIVAGMLPFFQAHSWMGVMAVLGVYGLSETFKWVN--EPFYFLNWLRFG 402
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: UPI0012FA5AE9 (hypothetical protein n=1 Tax=Chitinibacter sp. GC72 TaxID=1526917 RepID=UPI0012FA5AE9) HSP 1 Score: 72.8 bits (177), Expect = 1.210e-11 Identity = 51/162 (31.48%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 1 TMRGSLLLCSILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSALAVVLWFFSGGIGGLTMLMDKDLTLSNIVNEDWMQKTSTGA-ELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEASLSRGEKTRMFAIAGVITGLIPLVHAHSFVAIGVVAL 483
++R SLLL S+L+ A + LLA + D Q LA +L+FF+GG+G + + T + I+ E + T+ + W + I+ +I+PQR+ M + +A+ + R+E RG +AGV+ GL+P++H HSF+AIG+++L
Sbjct: 180 SLRWSLLLPSLLMCAMIVFSFILLAFEVSKDKRATQ-------LATLLFFFNGGLGFIYFFGWHEYTFAQILTEFYKTPTNYNEMNIRWSNVIADMIIPQRTTMAGWSVALFALWALLRFTRSEGRDKRGWGM----LAGVLVGLLPMIHTHSFMAIGLISL 330
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: A0A1J4K9C6_9EUKA (Uncharacterized protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4K9C6_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 3.000e-11 Identity = 49/167 (29.34%), Postives = 85/167 (50.90%), Query Frame = 1
Query: 28 SILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSA--LAVVLWFFSGGIGGLTMLMDKDLTLSNIVNEDWMQKTSTGAELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEASLSRGEKTRMFAIAGVITGLIPLVHAHSFVAIGVVALTYC-FLHPMKMFN 519
S+ IS A LL ++A F IQ + A L ++++ F+GG+G + + + VN + E +W +S++H + PQRS F+ P+ +LV + + S S + +AG++ G +P++ AHSF+A+G+ AL+ C F P K F+
Sbjct: 177 SLRISIAVPTLLLMIALLFALHYLFIQYTNIRYAPELGIIIFVFAGGVGWKWFFLKE---CRDNVNSNLSHNFCPDKETFWINSVAHFLFPQRSGAFSMPICLLVISLLI-----QISKSALKDLNSIILAGIMMGSLPMISAHSFIAVGLYALSICCFTFPWKNFS 335
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: A0A2V8L4F5_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8L4F5_9BACT) HSP 1 Score: 71.2 bits (173), Expect = 4.360e-11 Identity = 46/182 (25.27%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 1 TMRGSLLLCSILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSALAVVLWFFSGGIGGLTMLMD------KDLTLSNIVNEDWMQKTSTGAELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEASLSRGEKTR------MFAIAGVITGLIPLVHAHSFVAIGVVALTYCFLHPMK 510
++R + +L ++++ AA GLLY LA RI Q ++ +A VL+ +GG+G + D N ++ ++ + + G L+W + ++ +++PQR+++F PLA+++F + + +K + +AGV+ GL+PL H H+++A+ +V++ L P +
Sbjct: 212 SLRAAFILSALILGAATAGLLYSLAL-------RISRSQRVATMATVLFLLNGGLGFIYFFRDWWQSNQSFFAFFNSLHTNYAKISERG--LHWTNLVADMLVPQRTSLFGLPLALMIFAVFAFVWQRWHQVDDDKKENSPRILILMLVAGVLAGLLPLFHTHTYIAVALVSIGLFALRPRR 384
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: A0A7D5VA13_9NEIS (Uncharacterized protein n=1 Tax=Chitinibacter fontanus TaxID=1737446 RepID=A0A7D5VA13_9NEIS) HSP 1 Score: 70.9 bits (172), Expect = 5.610e-11 Identity = 49/162 (30.25%), Postives = 89/162 (54.94%), Query Frame = 1
Query: 1 TMRGSLLLCSILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSALAVVLWFFSGGIGGLTMLMDKDLTLSNIVNEDWMQKTSTGA-ELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEASLSRGEKTRMFAIAGVITGLIPLVHAHSFVAIGVVAL 483
++R +LLL S+L+ A + LLA + D Q LA++L+FF+GG+G + + T + I+ E + T+ + W + I+ +I+PQR+ M + +A+ ++ +R SR +K +AG + GL+P++H HSF+AIG+++L
Sbjct: 181 SLRWALLLPSLLMCAMIVFSFILLAFEVSKDKRATQ-------LAMLLFFFNGGLGFIYFFGWHEYTFTQILTEFYKTPTNYNEMNIRWSNVIADMIIPQRTTMAGWSVALFA---LWALLRFTRIGSRADKRGWGMLAGALVGLLPMIHTHSFMAIGLISL 332
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: A0A2V8R6Z5_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8R6Z5_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 5.910e-11 Identity = 50/184 (27.17%), Postives = 91/184 (49.46%), Query Frame = 1
Query: 4 MRGSLLLCSILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSALAVVLWFFSGGIGGLTMLMDKDLTLSNIVNEDWMQKTSTGAE------LYWFSSISHVILPQRSAMFAYPLAVLVFICI-------YTGIRNEASLSRGEKTR--MFAIAGVITGLIPLVHAHSFVAIGVVALTYCFLHPMK 510
+R ++L ++ ++ GL Y A R+ Q +ALA +L+ +GG+G + +L +D S D+ + ++W + ++ +LPQR+++F PL ++VF Y G + + GE++ + AGV+ GL+PL H H+FVA+G+V+L L P +
Sbjct: 190 LRAAMLATALPLALVVTGLFYTFAL-------RLVRTQRAAALATILFLLNGGLGFIDLL--RDWRASGRSFPDFWDTLAVNYANAWERGIHWTNLVADTLLPQRTSLFGLPLGLMVFTLFAVVWRRGYEGSEGDEKNTGGERSSAALLLAAGVLAGLLPLFHTHTFVAVGLVSLFLFALRPRR 364
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: A0A536RY19_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536RY19_9CHLR) HSP 1 Score: 70.1 bits (170), Expect = 1.030e-10 Identity = 43/148 (29.05%), Postives = 79/148 (53.38%), Query Frame = 1
Query: 28 SILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSALAVVLWFFSGGIGGLTMLMDKD----LTLSNIVNEDWMQKTSTGAELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEASLSRGEKTRMFAIAGVITGLIPLVHAHSF 459
S ++ AF G+LYL A +F + ++++A+AV ++ SGG+G + +L D L ++ E + + L W + + ++PQRS +F + LA+++F+ ++ +RN R F AGV+ GL+PL H H++
Sbjct: 202 SAMLGLAFPGVLYLAALRFAAS-------RVVAAVAVFVFLLSGGLGFVYLLSDLQHGGLAALEHLPREYTLNRD---VNLQWLNPVLAYLVPQRSTLFGFSLALILFVVLWIAVRNRLGW------RPFIFAGVVAGLLPLFHVHAY 333
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: A2GCW3_TRIVA (Uncharacterized protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2GCW3_TRIVA) HSP 1 Score: 69.7 bits (169), Expect = 1.360e-10 Identity = 52/194 (26.80%), Postives = 94/194 (48.45%), Query Frame = 1
Query: 1 TMRGSLLLCSILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSALAVVLWFFSGGIGGLTMLMDKDLTLSNIVNE--DWMQKTSTGAELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEASLSRGEKTRMFAIAGVITGLIPLVHAHSFVAIGVVALTYC-----FLHPMKMFNMTSQGHFWSWMAFG 561
+++ SL + S+L+ + L LY L+ + ++ ++ L+++++ GG+G +M D T +E D + + YWF SI H ++PQRSA+F PL + + G++NE+ + IA ++TGL P V AH+++++ ++ YC +L P K F W FG
Sbjct: 127 SLQQSLFIPSLLMMYSVLLSLYTLSTYYTNE-------SIIGCLSILIFICLGGLG---FIMYTDPTWKAPEDEIVDMVHNWPNAIDGYWFHSIMHYLIPQRSALFGVPLCYWTILLLIFGVKNESY-------KFMFIAAILTGLTPQVQAHAYMSMAQWSIAYCITTFPYLKPKKYLKF-----FLLWSLFG 298
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: A0A7L4RKL4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Micrarchaeota archaeon TaxID=2250274 RepID=A0A7L4RKL4_9ARCH) HSP 1 Score: 68.9 bits (167), Expect = 2.140e-10 Identity = 44/150 (29.33%), Postives = 78/150 (52.00%), Query Frame = 1
Query: 61 LYLLAKQFLSDLGRIQGVQLMSALAVVLWFFSGGIGGLTMLMDKDLTLSNIVNEDWMQKTSTGAELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEASLSRGEKTRMFAIAGVITGLIPLVHAHSFVAIGVVALTYCFLHPMK 510
L+ LAK+F S + ++ALA++ + F+G G + D ++ L++ + I V +P+RSA+ + AV++++ ++ RN S ++ R F +AG++ GL+PL HAHSF+A GV A + F P +
Sbjct: 201 LFYLAKEFSSS-------KKIAALALLFFLFNGNAGIMNAFGDALQNPGALLQPSLDYSHDEPRGLFFMNVIYAVFVPERSALLGFTAAVVIYLLLW---RNVFEPSGRQRKREFLLAGILFGLLPLTHAHSFLAAGVAAAFFFFNKPTR 340
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Match: A0A1J4J6H0_9EUKA (Uncharacterized protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4J6H0_9EUKA) HSP 1 Score: 68.9 bits (167), Expect = 2.560e-10 Identity = 46/164 (28.05%), Postives = 77/164 (46.95%), Query Frame = 1
Query: 1 TMRGSLLLCSILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSALAVVLWFFSGGIGGLTMLMDKDLTLSNIVNEDWMQKTSTGAELYWFSSISHVILPQRSAMFAYPLAVLVFICIYTGIRNEASLSRGEKTRMFAIAGVITGLIPLVHAHSFVAIGVVALTYC 492
TMR ++ S LI +F Y L+ +F D +A +L+ GG+G + K ++ DW+ YWF + H+I+PQR++++++PL Y I + R+F +AG+ TGL PL+ HSFV++ ++ YC
Sbjct: 182 TMRAAMFFPSALIILSFFVGQYSLSYKFTKD-------HFSCLIAAILFANLGGLGWI-----KYVSQPRRGYADWIHNWGNNQYEYWFHPLFHIIVPQRASLWSFPLC-------YWAILTLIQAVEAKDWRLFTLAGIFTGLSPLIQVHSFVSLAQWSIAYC 326 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig116015.3329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig116015.3329.1 >prot_M-pyrifera_M_contig116015.3329.1 ID=prot_M-pyrifera_M_contig116015.3329.1|Name=mRNA_M-pyrifera_M_contig116015.3329.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp MRGSLLLCSILISAAFLGLLYLLAKQFLSDLGRIQGVQLMSALAVVLWFFback to top mRNA from alignment at M-pyrifera_M_contig116015:3..563- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig116015.3329.1 ID=mRNA_M-pyrifera_M_contig116015.3329.1|Name=mRNA_M-pyrifera_M_contig116015.3329.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig116015:3..563- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig116015:3..563- >mRNA_M-pyrifera_M_contig116015.3329.1 ID=mRNA_M-pyrifera_M_contig116015.3329.1|Name=mRNA_M-pyrifera_M_contig116015.3329.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig116015:3..563- (Macrocystis pyrifera P11B4 male)back to top |