mRNA_M-pyrifera_M_contig115997.3323.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig115997.3323.1
Unique NamemRNA_M-pyrifera_M_contig115997.3323.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: A0A7S4I6P0_9EUKA (V-type proton ATPase subunit a n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I6P0_9EUKA)

HSP 1 Score: 257 bits (656), Expect = 8.500e-78
Identity = 129/193 (66.84%), Postives = 152/193 (78.76%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYK----------KMFASEAGNY-LYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYNAIYF 546
            FVTNRFT+ FQN++++YG+ARYRE+NPA LTIVTFPFLFGVMFGDIGHGF+LFLI L LV+KE+ LG+IKLPEMVDTLY+GRWLFLLM + SMYCG LYNEFFG+PM+LFG++W Y     K              S++  Y  YP G DPLWKGANNEL YYNSLKMK SV MGVV M VGI++S +N I+F
Sbjct:  376 FVTNRFTDAFQNLVESYGVARYREINPAVLTIVTFPFLFGVMFGDIGHGFILFLIGLFLVVKEKELGRIKLPEMVDTLYDGRWLFLLMAICSMYCGSLYNEFFGIPMDLFGTNWAYPAEIVKGTDSEYAVWLNTEVSDSDEYRCYPFGADPLWKGANNELDYYNSLKMKMSVLMGVVHMTVGIIISLFNQIHF 568          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: L8HHZ1_ACACA (V-type proton ATPase subunit a n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHZ1_ACACA)

HSP 1 Score: 210 bits (534), Expect = 2.350e-60
Identity = 103/183 (56.28%), Postives = 133/183 (72.68%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYKKMFASEAG-NYLYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYNAIYF 546
            F TN+FT+ FQ ++DAYG+ARYRE+NP   TIVTFPFLFG+MFGD+GHG +LF+ A+ L IKE+   K+KL EMV T ++GR+L LLM + ++YCG LYNE F +P+++FGS W Y   +  + FA        YP GVDP WKGA NEL YYNS+KMK S+  GV  M+ GI++SA N IYF
Sbjct:  376 FKTNKFTKSFQGIVDAYGMARYREVNPGVFTIVTFPFLFGMMFGDVGHGIMLFIFAVYLCIKEDTFSKMKLNEMVKTCFDGRYLLLLMALGAIYCGALYNEVFSVPLDIFGSRWQY---FEGEQFAEWTNPGIAYPFGVDPAWKGAKNELLYYNSIKMKLSIIFGVTHMVFGILLSALNGIYF 555          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: A0A7S4P365_9EUKA (V-type proton ATPase subunit a (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4P365_9EUKA)

HSP 1 Score: 188 bits (477), Expect = 3.020e-54
Identity = 95/182 (52.20%), Postives = 131/182 (71.98%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPM--NLFGSDWTYAV-PYYKKMFASEAGNYLYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYNA 537
            F TN+FT+  Q ++DAYG+A+Y+E+NP   +I+TFPFLFGVMFGD+GHG ++ L  L L+ +E+   K  L EMV T ++GR++ +LM++ S+YCG +YNE F +PM  N F +   Y + P    M  ++ G Y YP GVDP WKGA NEL+YYNSLKMK SV MGV+QM++GI++S  NA
Sbjct:   69 FRTNKFTQAHQEIVDAYGVAQYQEINPTVFSIITFPFLFGVMFGDVGHGIMMLLFVLFLIAREKAFMKEGLNEMVQTCFDGRYIIVLMSLFSIYCGFMYNECFSVPMAFNGFPASSQYDLTPGQTHMTLNDEG-YRYPFGVDPAWKGAENELYYYNSLKMKMSVLMGVIQMMLGIILSGLNA 249          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: A0A2P6NQ44_9EUKA (V-type proton ATPase subunit a n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NQ44_9EUKA)

HSP 1 Score: 189 bits (481), Expect = 1.040e-52
Identity = 97/187 (51.87%), Postives = 128/187 (68.45%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYKKMFASEAGNYLYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYNAIYFATSTD 561
            F TN+FT  FQ ++DAYGIARY E+NPA   I+TFPFLF VMFGDIGHG ++ L+A+  VI E+ LGK KL EM+ T+++GR+L L+M + S+Y GL+YNE F +P+ L G         + +    +  N +YP GVDP W GA N L + NSLKMK S+  GVVQM VGIV+S +NA++F    D
Sbjct:  408 FKTNKFTSGFQGIVDAYGIARYGEVNPAVFDIITFPFLFAVMFGDIGHGLIMLLLAVYFVINEKSLGKTKLNEMIKTIFDGRYLLLMMGLFSLYTGLIYNETFAVPITLSGLQGFDQESCHSQGVCQQKVNSVYPFGVDPTWFGAENALMFSNSLKMKMSIIFGVVQMSVGIVLSLFNAMHFRKPLD 594          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: A0A446LIE8_TRITD (V-type proton ATPase subunit a n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446LIE8_TRITD)

HSP 1 Score: 179 bits (453), Expect = 3.100e-52
Identity = 94/191 (49.21%), Postives = 130/191 (68.06%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYKKMFASEAG----NYLYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYNAIYFATSTD 561
            F TN+FT  FQ+++DAYGIA Y+E+NP   TIVTFPFLF VMFGD GHG  +FL AL L+I+E+ L   KL ++V+ ++ GR++ L+M++ S+Y GL+YNEFF +P  LFG    YA        A+  G       YP GVDP+W G+ +EL + NSLKMK S+ +G+ QM +GIV+S +NA YF  + +
Sbjct:   72 FQTNKFTSSFQDIVDAYGIASYQEVNPGLFTIVTFPFLFAVMFGDWGHGICIFLTALYLIIREKKLASQKLDDIVEIMFAGRYVILIMSLFSIYTGLIYNEFFSVPFELFGKS-AYACHDPSCGDATTEGLVRVGQTYPFGVDPVWHGSRSELPFLNSLKMKMSILLGIAQMNLGIVLSLFNAKYFKNTVN 261          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: A0A5B7BK26_DAVIN (V-type proton ATPase subunit a (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BK26_DAVIN)

HSP 1 Score: 176 bits (447), Expect = 3.660e-52
Identity = 95/191 (49.74%), Postives = 126/191 (65.97%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYKKMFASEAGNYLY----PLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYNAIYFATSTD 561
            F TNRFT  FQ ++DAYG+ARY+E NPA  T++TFPFLF VMFGD GHG  L L ALVL+ +E  LG  KL   ++ L+ GR++ LLM++ S+YCGL+YNEFF +P ++FG    Y         A   G   Y    P GVDP W+G+ +EL + NSLKMK S+ +GV QM +GI++S +NA +   S D
Sbjct:   22 FRTNRFTNAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESKLGSQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGGS-AYKCRDDTCSDAHSVGLIKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVAQMNLGILLSYFNARFSGNSLD 211          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: A0A8J4UWZ8_9MYCE (V-type proton ATPase subunit a n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UWZ8_9MYCE)

HSP 1 Score: 186 bits (473), Expect = 1.070e-51
Identity = 94/181 (51.93%), Postives = 127/181 (70.17%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYKKMFASEAGNYLYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYNAIY 543
            F TN++T  FQ +++AYGIA YRE+NPA +TIVTFPFLFGVMFGD+GHG LL   ++ L++ E+ L   KL E++   ++GR++  LM++ S+Y G +YNE F +PMN+FGS WT  +        +  G Y  P GVDP+WKGA NEL YYNS KMK SV  GVVQM +GI+ S +N ++
Sbjct:  376 FETNKYTRSFQEIVNAYGIAHYREVNPAVMTIVTFPFLFGVMFGDVGHGILLLASSIALILLEKKLAGKKLNELIQMPFDGRYVLFLMSLFSIYVGFIYNECFSIPMNIFGSKWT-LINNGTAYDPTPTGTY--PFGVDPVWKGAPNELVYYNSFKMKLSVVFGVVQMTLGIIFSLFNYLH 553          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: A0A152A2P9_9MYCE (V-type proton ATPase subunit a n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2P9_9MYCE)

HSP 1 Score: 186 bits (472), Expect = 1.500e-51
Identity = 95/178 (53.37%), Postives = 124/178 (69.66%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYKKMFASEAGNYLYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYN 534
            F TN++T  FQ +++AYG+A YRE+NPA +TIVTFPFLFGVMFGD+GHG LL   +L L+  E+ L   KL E++   ++GR++  LM++ S+Y G +YNE F +PMNLFGS WT A       +  +     YP GVDP+WKGA NEL YYNS KMK SV  G+VQM +GIV S +N
Sbjct:  380 FETNKYTRSFQEIVNAYGMAHYREVNPAVMTIVTFPFLFGVMFGDVGHGILLLAASLALIGLEKKLAGKKLNELIQMPFDGRYVLFLMSLFSIYVGFIYNECFSIPMNLFGSKWTLADNGTTYTYDQKT----YPFGVDPVWKGAPNELEYYNSFKMKLSVIFGIVQMTLGIVFSLFN 553          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: VATM_DICDI (Vacuolar proton translocating ATPase 100 kDa subunit n=2 Tax=Dictyostelium discoideum TaxID=44689 RepID=VATM_DICDI)

HSP 1 Score: 186 bits (471), Expect = 2.070e-51
Identity = 97/178 (54.49%), Postives = 126/178 (70.79%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYKKMFASEAGNYLYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYN 534
            F TN++T  FQ +++AYGIA YRE+NPA LTIVTFPFLFGVMFGD+GHG LL L AL L+  E+ L   KL E++   ++GR++  LM++ S+Y G +YNE F +PMN+FGS   Y +     ++  +  + +YP+GVDPLWKGA NEL YYNS KMK S+  GVVQM VGI  S  N
Sbjct:  379 FETNKYTSSFQEIVNAYGIAHYREVNPAVLTIVTFPFLFGVMFGDVGHGALLLLSALGLISLEKKLAGKKLNELIQMPFDGRYVLFLMSLFSIYVGFIYNECFSIPMNIFGSQ--YNLNSTTGLYTYQHTDRVYPVGVDPLWKGAPNELVYYNSFKMKLSIIFGVVQMSVGICFSLLN 554          
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Match: M2X2W4_GALSU (V-type proton ATPase subunit a n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X2W4_GALSU)

HSP 1 Score: 186 bits (471), Expect = 2.520e-51
Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 1
Query:    1 FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGFLLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYNEFFGLPMNLFGSDWTYAVPYYKKMFASEAGNY-----------LYPLGVDPLWKGANNELFYYNSLKMKTSVCMGVVQMLVGIVMSAYNAIYFATSTD 561
            F TN+FT  FQN++++YG+A YRELNPA  TI+TFPFLF VMFGD+GHG L+ L AL L++ E+ LG+  L E++   Y+GR++ LLM + S+Y GL+YNEFFG+ MNLFGS W +        FA    N            +YP+G DP+W  A+N L ++NS KMK S+ +GV QM++GI +S  NA YF  S D
Sbjct:  379 FRTNKFTVVFQNIVESYGVASYRELNPACFTIITFPFLFAVMFGDVGHGLLMCLFALYLILFEKKLGRKTLNEILQFCYDGRYIILLMGIFSLYTGLIYNEFFGVAMNLFGSRWKFNS---SSNFACGIDNCVDSSQSLPPRNIYPIGFDPIWSQASNGLTFFNSYKMKLSIVLGVFQMVMGIFLSYLNARYFQRSLD 573          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115997.3323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4I6P0_9EUKA8.500e-7866.84V-type proton ATPase subunit a n=1 Tax=Vannella sp... [more]
L8HHZ1_ACACA2.350e-6056.28V-type proton ATPase subunit a n=1 Tax=Acanthamoeb... [more]
A0A7S4P365_9EUKA3.020e-5452.20V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A2P6NQ44_9EUKA1.040e-5251.87V-type proton ATPase subunit a n=1 Tax=Planoprotos... [more]
A0A446LIE8_TRITD3.100e-5249.21V-type proton ATPase subunit a n=2 Tax=Triticum tu... [more]
A0A5B7BK26_DAVIN3.660e-5249.74V-type proton ATPase subunit a (Fragment) n=1 Tax=... [more]
A0A8J4UWZ8_9MYCE1.070e-5151.93V-type proton ATPase subunit a n=1 Tax=Polysphondy... [more]
A0A152A2P9_9MYCE1.500e-5153.37V-type proton ATPase subunit a n=1 Tax=Tieghemoste... [more]
VATM_DICDI2.070e-5154.49Vacuolar proton translocating ATPase 100 kDa subun... [more]
M2X2W4_GALSU2.520e-5149.49V-type proton ATPase subunit a n=1 Tax=Galdieria s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115997contigM-pyrifera_M_contig115997:1..561 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.8
Seed ortholog evalue2.8e-46
Seed eggNOG ortholog130081.XP_005707240.1
KEGG koko:K02154
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04721,ko04966,ko05110,ko05120,ko05152,ko05165,ko05323,map00190,map01100,map04142,map04145,map04721,map04966,map05110,map05120,map05152,map05165,map05323
KEGG ModuleM00160
Hectar predicted targeting categorysignal anchor
GOsGO:0000139,GO:0000323,GO:0000325,GO:0000331,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005798,GO:0005802,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006873,GO:0006875,GO:0006882,GO:0006885,GO:0006897,GO:0006909,GO:0006911,GO:0007035,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009526,GO:0009536,GO:0009678,GO:0009705,GO:0009941,GO:0009987,GO:0010008,GO:0010324,GO:0012505,GO:0012506,GO:0012510,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019829,GO:0019899,GO:0022607,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030003,GO:0030004,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030641,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0030666,GO:0030670,GO:0031090,GO:0031164,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032009,GO:0032119,GO:0032588,GO:0032991,GO:0033176,GO:0034220,GO:0034622,GO:0034641,GO:0034654,GO:0036442,GO:0042470,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044434,GO:0044435,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044769,GO:0045335,GO:0045735,GO:0045851,GO:0046034,GO:0046390,GO:0046483,GO:0046916,GO:0046961,GO:0048770,GO:0048878,GO:0050801,GO:0051117,GO:0051179,GO:0051234,GO:0051235,GO:0051238,GO:0051452,GO:0051453,GO:0051641,GO:0051651,GO:0055065,GO:0055067,GO:0055069,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0055086,GO:0061024,GO:0065003,GO:0065007,GO:0065008,GO:0070070,GO:0070071,GO:0070072,GO:0071704,GO:0071840,GO:0071944,GO:0072503,GO:0072507,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0097708,GO:0098588,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098771,GO:0098791,GO:0098796,GO:0098805,GO:0098852,GO:0099024,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
EggNOG free text desc.vacuolar proton-transporting V-type ATPase complex assembly
EggNOG OGsCOG1269@1,KOG2189@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04147
Exons1
Model size561
Cds size561
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815676.6024296-CDS-M-pyrifera_M_contig115997:0..5611622815676.6024296-CDS-M-pyrifera_M_contig115997:0..561Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115997 1..561 +
1692277516.902261-CDS-M-pyrifera_M_contig115997:0..5611692277516.902261-CDS-M-pyrifera_M_contig115997:0..561Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115997 1..561 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115997.3323.1prot_M-pyrifera_M_contig115997.3323.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig115997 1..561 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig115997.3323.1

>prot_M-pyrifera_M_contig115997.3323.1 ID=prot_M-pyrifera_M_contig115997.3323.1|Name=mRNA_M-pyrifera_M_contig115997.3323.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
FVTNRFTECFQNVIDAYGIARYRELNPAPLTIVTFPFLFGVMFGDIGHGF
LLFLIALVLVIKEEPLGKIKLPEMVDTLYEGRWLFLLMTMASMYCGLLYN
EFFGLPMNLFGSDWTYAVPYYKKMFASEAGNYLYPLGVDPLWKGANNELF
YYNSLKMKTSVCMGVVQMLVGIVMSAYNAIYFATSTD
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mRNA from alignment at M-pyrifera_M_contig115997:1..561+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig115997.3323.1 ID=mRNA_M-pyrifera_M_contig115997.3323.1|Name=mRNA_M-pyrifera_M_contig115997.3323.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig115997:1..561+ (Macrocystis pyrifera P11B4 male)
TTCGTCACGAACCGATTCACCGAGTGCTTCCAGAACGTGATCGACGCCTA CGGCATCGCCCGCTACAGAGAGCTGAACCCTGCTCCTCTCACCATCGTCA CCTTCCCCTTCCTCTTTGGAGTGATGTTCGGAGACATTGGACACGGCTTC TTGCTGTTCCTCATTGCCCTCGTCCTTGTGATCAAGGAGGAGCCCCTGGG AAAGATCAAGCTGCCTGAGATGGTCGACACCCTCTACGAGGGACGCTGGC TGTTCTTGCTGATGACCATGGCCTCGATGTACTGTGGTCTGCTCTACAAC GAGTTCTTCGGCCTACCGATGAATCTCTTTGGATCCGACTGGACCTATGC TGTGCCTTACTACAAGAAGATGTTTGCCAGCGAGGCGGGCAACTACCTTT ACCCGCTGGGTGTTGACCCTCTGTGGAAGGGAGCTAACAACGAGCTCTTC TACTACAACTCGCTGAAGATGAAGACCTCTGTGTGCATGGGAGTCGTTCA GATGCTGGTTGGTATCGTGATGTCTGCCTACAACGCCATCTACTTTGCCA CCTCGACCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig115997:1..561+

>mRNA_M-pyrifera_M_contig115997.3323.1 ID=mRNA_M-pyrifera_M_contig115997.3323.1|Name=mRNA_M-pyrifera_M_contig115997.3323.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig115997:1..561+ (Macrocystis pyrifera P11B4 male)
TTCGTCACGAACCGATTCACCGAGTGCTTCCAGAACGTGATCGACGCCTA
CGGCATCGCCCGCTACAGAGAGCTGAACCCTGCTCCTCTCACCATCGTCA
CCTTCCCCTTCCTCTTTGGAGTGATGTTCGGAGACATTGGACACGGCTTC
TTGCTGTTCCTCATTGCCCTCGTCCTTGTGATCAAGGAGGAGCCCCTGGG
AAAGATCAAGCTGCCTGAGATGGTCGACACCCTCTACGAGGGACGCTGGC
TGTTCTTGCTGATGACCATGGCCTCGATGTACTGTGGTCTGCTCTACAAC
GAGTTCTTCGGCCTACCGATGAATCTCTTTGGATCCGACTGGACCTATGC
TGTGCCTTACTACAAGAAGATGTTTGCCAGCGAGGCGGGCAACTACCTTT
ACCCGCTGGGTGTTGACCCTCTGTGGAAGGGAGCTAACAACGAGCTCTTC
TACTACAACTCGCTGAAGATGAAGACCTCTGTGTGCATGGGAGTCGTTCA
GATGCTGGTTGGTATCGTGATGTCTGCCTACAACGCCATCTACTTTGCCA
CCTCGACCGACTTCGTCACGAACCGATTCACCGAGTGCTTCCAGAACGTG
ATCGACGCCTACGGCATCGCCCGCTACAGAGAGCTGAACCCTGCTCCTCT
CACCATCGTCACCTTCCCCTTCCTCTTTGGAGTGATGTTCGGAGACATTG
GACACGGCTTCTTGCTGTTCCTCATTGCCCTCGTCCTTGTGATCAAGGAG
GAGCCCCTGGGAAAGATCAAGCTGCCTGAGATGGTCGACACCCTCTACGA
GGGACGCTGGCTGTTCTTGCTGATGACCATGGCCTCGATGTACTGTGGTC
TGCTCTACAACGAGTTCTTCGGCCTACCGATGAATCTCTTTGGATCCGAC
TGGACCTATGCTGTGCCTTACTACAAGAAGATGTTTGCCAGCGAGGCGGG
CAACTACCTTTACCCGCTGGGTGTTGACCCTCTGTGGAAGGGAGCTAACA
ACGAGCTCTTCTACTACAACTCGCTGAAGATGAAGACCTCTGTGTGCATG
GGAGTCGTTCAGATGCTGGTTGGTATCGTGATGTCTGCCTACAACGCCAT
CTACTTTGCCACCTCGACCGAC
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