mRNA_M-pyrifera_M_contig115973.3314.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A3D5DAW1_9GAMM (4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DAW1_9GAMM) HSP 1 Score: 290 bits (743), Expect = 5.510e-94 Identity = 145/187 (77.54%), Postives = 163/187 (87.17%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGAGISGRDKSALMKLAWD 561
SAQFDEMD+TVVFD+VLVPWDRVFLH + LNR+YK++RMRE+TAHQTN+RLEVKLGF+YALLV +A AAG D TME+LGEAA+RVEVIR+TTRSAELQATVD DNGVLYPDLPALQ GRALGPIYYPEMI MIRKI GGGL+QLPVSL EFDS IG L+KSL+G+ I G DK+ MKLAWD
Sbjct: 248 SAQFDEMDSTVVFDNVLVPWDRVFLHENTTFLNRMYKDTRMREMTAHQTNSRLEVKLGFVYALLVRMAAAAGTDNRSETMELLGEAALRVEVIRNTTRSAELQATVDPDNGVLYPDLPALQVGRALGPIYYPEMIAMIRKIGGGGLVQLPVSLDEFDSAIGPDLKKSLSGSSIGGLDKTRQMKLAWD 434
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A1Y0BFT2_9BACT (E294 n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BFT2_9BACT) HSP 1 Score: 275 bits (702), Expect = 8.200e-88 Identity = 130/187 (69.52%), Postives = 160/187 (85.56%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGAGISGRDKSALMKLAWD 561
SAQFDEMDATVVFD+VLVPW+RVFLH DI LLNR+Y+++RMRE+TAHQTN RLE KLGF+YA+L+ +A+A+G+D +EMLGEA + +E IR+TTRSAELQATVD +NGVLYPDL ALQ GRALGP+ YP + MIRK++GGGL+QLP S+ EFDSPIG LE++L GAGI GRDK+ L++LAWD
Sbjct: 248 SAQFDEMDATVVFDNVLVPWERVFLHEDIGLLNRMYRDTRMRELTAHQTNVRLETKLGFVYAVLLRVAQASGIDTRKDVIEMLGEAVMNLEAIRNTTRSAELQATVDPENGVLYPDLAALQCGRALGPVVYPRAVQMIRKVAGGGLVQLPNSMHEFDSPIGADLERALRGAGIGGRDKAQLLRLAWD 434
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A1Z9ULK6_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9ULK6_9GAMM) HSP 1 Score: 273 bits (698), Expect = 3.280e-87 Identity = 128/187 (68.45%), Postives = 164/187 (87.70%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGAGISGRDKSALMKLAWD 561
S++FDEMDATVVFD V VPW+RVF++ +I LLNR+Y++SRMRE+TAHQTN RLE KLGF+Y+++ LA A G++ P MEMLGEAAV++EVIRSTTRSAE QAT+D +NGVLYPDL +LQAGRALGPIYYPEMI+MIRK+ GG L+Q+PV++AEFDSP+G+ +EK+L GA ISG++K+ L+K+AWD
Sbjct: 248 SSRFDEMDATVVFDEVHVPWERVFVYKNIVLLNRMYRDSRMRELTAHQTNTRLEAKLGFVYSVIQRLAEAQGIENXPEVMEMLGEAAVKIEVIRSTTRSAEYQATLDHENGVLYPDLASLQAGRALGPIYYPEMIDMIRKMGGGALVQVPVTMAEFDSPVGQDIEKALRGAAISGQEKTQLLKVAWD 434
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A7Y4X3X9_9DELT (4-hydroxyphenylacetate 3-monooxygenase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X3X9_9DELT) HSP 1 Score: 206 bits (524), Expect = 3.630e-61 Identity = 103/187 (55.08%), Postives = 128/187 (68.45%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGAGISGRDKSALMKLAWD 561
SA+FDEMDA VVFD VLVPWDRVFLHG+ L+ Y +R+RE+TAHQTN RL K+ F+Y +L +A A G+ P EMLGEAA VE+I+S +AE+QA VD NGV YP L LQ GR GP YP ++ M+R++ GL+Q P +LA FDSPIG+ L K GA +S DK +L KLAWD
Sbjct: 248 SARFDEMDAVVVFDDVLVPWDRVFLHGNPRLVAGAYPMTRVRELTAHQTNTRLLSKIEFVYGVLCAMAEAIGVQNTPPVQEMLGEAASYVEIIKSALLAAEMQAIVDPSNGVTYPALQPLQVGRVWGPRIYPRLMEMVRRLGASGLMQPPATLAAFDSPIGDTLRKYYRGAKVSAEDKQSLFKLAWD 434
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A1Y0BFQ2_9BACT (E122 n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BFQ2_9BACT) HSP 1 Score: 202 bits (513), Expect = 1.490e-59 Identity = 101/187 (54.01%), Postives = 127/187 (67.91%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGAGISGRDKSALMKLAWD 561
S +FDEMDA VFD VLVPW+RVFLH D+ L+ +LY +R+RE+TA QTN R K+ F+Y LL +A A G+ P E LGEAA +E+I+S+ +AELQA VD NGV+YP L LQ GR P YP ++ M+R+I GGL+QLP S+ FDSPIG LEK GA I+ R+K L KLAWD
Sbjct: 248 SGRFDEMDAVAVFDDVLVPWERVFLHKDVRLVAQLYAGTRIRELTAQQTNTRFLSKIEFVYGLLCHMAEAIGVQNAPPVQETLGEAATFIEIIKSSLLTAELQAEVDPSNGVMYPALQPLQIGRTWAPRMYPRLMEMVRRIGAGGLMQLPASVDAFDSPIGPDLEKYYRGAKIAAREKVGLFKLAWD 434
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A371BAC1_9HYPH (4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371BAC1_9HYPH) HSP 1 Score: 143 bits (361), Expect = 2.860e-37 Identity = 82/188 (43.62%), Postives = 118/188 (62.77%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGA-GISGRDKSALMKLAWD 561
++ F+E D+ +VF VLVPW+RVFL GD+ L NRLY E+++R TAHQT+ R +K+ F L V +AR++ D EMLGE V +E IR+ +AE +A A +GVL P L LQ R L YP +I +++ + GG++ P S+A+F SPIG + + GA G SG D++ L+K+AWD
Sbjct: 244 ASNFEEADSLLVFKDVLVPWERVFLLGDVGLSNRLYSETQIRNHTAHQTSVRGLIKMQFAIGLAVAVARSSKSDSFLHVQEMLGECVVYLETIRACIHAAEAEAK-RAPSGVLMPALAPLQTTRLLMSRAYPRVIEILQIVGAGGIMMTP-SMADFASPIGADVVRFNGGADGASGFDRTRLLKVAWD 429
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A6M6JRZ7_9PSEU (4-hydroxyphenylacetate 3-monooxygenase, oxygenase component n=9 Tax=Pseudonocardiaceae TaxID=2070 RepID=A0A6M6JRZ7_9PSEU) HSP 1 Score: 140 bits (352), Expect = 6.410e-36 Identity = 79/188 (42.02%), Postives = 111/188 (59.04%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQ-ATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGAGISGRDKSALMKLAWD 561
SA F+E D VVFD VLVPWDRVFLHGD+AL N LY E+ +R+ TAHQT R VKL F+ L ++L+++ +D + LGE VE + ++E + T DA G + P ALQ R L YP+++ +++ + GGL+ +P S +F SPI E + + GA + D+ L KLAWD
Sbjct: 248 SAHFEEADCLVVFDDVLVPWDRVFLHGDVALANALYSETNLRQHTAHQTGVRGLVKLQFVTGLAMKLSQSVKIDGFLHVQQKLGECIAAVEQAHALIVASEAEYETTDA--GTVRPRFNALQTLRVLLSTQYPQLVEVLQTLGAGGLLMMP-SAEDFGSPIAEDIARYYRGADMPAVDRIRLYKLAWD 432
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A2V5JV68_9BACL (4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Paenibacillus flagellatus TaxID=2211139 RepID=A0A2V5JV68_9BACL) HSP 1 Score: 138 bits (348), Expect = 2.260e-35 Identity = 71/187 (37.97%), Postives = 108/187 (57.75%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGAGISGRDKSALMKLAWD 561
SA++DEMDA ++FD VLVPW+RV L+GD + RL + HQT R KL F+ + +A A G++ E LGE +++ +++ ++E++A D + GVL P+ + R+LG YYP I++++++ GGG +Q P +L+EF PI LE GAG+ K L KLAWD
Sbjct: 247 SARYDEMDAVLLFDDVLVPWERVLLYGDADAVWRLRTNRTANGLAFHQTVVRFVAKLEFVAGVAFAIADAIGVNGFLHIQEKLGELLTQIDTMKALLLASEVRAKPD-ETGVLVPESSFIDTARSLGTTYYPRAIDILQQVGGGGFVQTPSTLSEFGGPIARLLELYFEGAGVGAEKKVQLFKLAWD 432
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: F4CM04_PSEUX (4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit n=3 Tax=Pseudonocardia TaxID=1847 RepID=F4CM04_PSEUX) HSP 1 Score: 138 bits (347), Expect = 3.570e-35 Identity = 76/188 (40.43%), Postives = 106/188 (56.38%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGA-GISGRDKSALMKLAWD 561
S+ F+E D VVFD VLVPWDRVFLHGD+AL N +Y E+ +R+ TAHQT R VK+ F+ + ++LA+ G+D + LGE E R+ R+AE+ A + P LQ R YP +++ + GGL+ +P S A+FDSPI + + GA G+ D+ L KLAWD
Sbjct: 247 SSHFEEADCLVVFDDVLVPWDRVFLHGDVALANAMYVETNLRQHTAHQTGVRGLVKMQFVTGVAMKLAQTVGIDGFLHVQQKLGELIAATETCRALLRAAEIDHETSASGRSVRPGFLPLQTLRMHLSSSYPRAAEVLQTLGAGGLLMMP-SAADFDSPISGDIARYFQGAAGLDATDRVRLYKLAWD 433
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Match: A0A7G7MBW2_9PSEU (4-hydroxyphenylacetate 3-monooxygenase, oxygenase component n=2 Tax=Pseudonocardia TaxID=1847 RepID=A0A7G7MBW2_9PSEU) HSP 1 Score: 137 bits (344), Expect = 9.030e-35 Identity = 76/188 (40.43%), Postives = 111/188 (59.04%), Query Frame = 1
Query: 1 SAQFDEMDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKLGFIYALLVELARAAGLDQHPGTMEMLGEAAVRVEVIRSTTRSAELQ-ATVDADNGVLYPDLPALQAGRALGPIYYPEMINMIRKISGGGLIQLPVSLAEFDSPIGEALEKSLAGAGISGRDKSALMKLAWD 561
S+ F+E D VVFD VLVPWDRVFLHGD+ L N LY + +R+ TAHQT R VKL FI L ++L+++ +D + LGE VE + ++E + T DA G + P ALQ R L YP+++ +++ + GGL+ +P S+ +F SP+ + + + GA +S D+ L KLAWD
Sbjct: 248 SSHFEEADCLVVFDDVLVPWDRVFLHGDVGLANALYSATNLRQHTAHQTGVRGLVKLQFITGLAMKLSQSVKIDGFLHVQQKLGECIAAVEQAHALIVASEAEYETTDA--GTVRPRFDALQTLRVLLATQYPKLVEVLQTLGAGGLLMMP-SVEDFTSPVADDIARYYRGADLSAVDRIRLYKLAWD 432 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115973.3314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115973.3314.1 >prot_M-pyrifera_M_contig115973.3314.1 ID=prot_M-pyrifera_M_contig115973.3314.1|Name=mRNA_M-pyrifera_M_contig115973.3314.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp MDATVVFDHVLVPWDRVFLHGDIALLNRLYKESRMREITAHQTNARLEVKback to top mRNA from alignment at M-pyrifera_M_contig115973:1..561- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115973.3314.1 ID=mRNA_M-pyrifera_M_contig115973.3314.1|Name=mRNA_M-pyrifera_M_contig115973.3314.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig115973:1..561- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115973:1..561- >mRNA_M-pyrifera_M_contig115973.3314.1 ID=mRNA_M-pyrifera_M_contig115973.3314.1|Name=mRNA_M-pyrifera_M_contig115973.3314.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig115973:1..561- (Macrocystis pyrifera P11B4 male)back to top |