prot_M-pyrifera_M_contig11595.3309.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11595.3309.1
Unique Nameprot_M-pyrifera_M_contig11595.3309.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
BLAST of mRNA_M-pyrifera_M_contig11595.3309.1 vs. uniprot
Match: D7FWB4_ECTSI (Putative ATP-dependent proteinase, possible LON protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB4_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 1.120e-115
Identity = 177/221 (80.09%), Postives = 193/221 (87.33%), Query Frame = 0
Query:    1 MFNDIGTKDNRFGMLVSDPTTGKPCKYGAVMECAQRKLLPDGRQYVLNQAIERFRVLKMVKSVPYTVMEVEVGIPDNEPFEGEPSKWGAEEGMLVEELEEQVFSTVNSVVELMNKLSPPADPSENRTLSEWFLRYSPKAKRDAAEDDGEVGEDDIKK--KEDERRMNFSFAVSEMIAMAPHTKQLLLQSRSTAYRLMATREILVKAQKELAAKSSLKDTLG 219
            MFNDIGT DNRFGMLV+D  TG+PCKYGAVMECAQRKLLPDGRQYVLNQA+ERFRVLK++K+ PYTVMEVEVGIPDN+P EGEP KWGAEEG  +E+LE +V+ TVNSVV+LMNKL+PPA P ENRTLSEWFLRYSPK KRD   D GE   DD+ K  KEDERRM FS+AV+EMIAM   TKQLLLQSRSTAYRLMA REILVKAQKELAAKSSLKDTLG
Sbjct:   36 MFNDIGTTDNRFGMLVTDAKTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKTNPYTVMEVEVGIPDNKPLEGEPVKWGAEEGTRLEDLELEVYDTVNSVVDLMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLD-GESAGDDLAKQAKEDERRMKFSYAVAEMIAMESRTKQLLLQSRSTAYRLMAVREILVKAQKELAAKSSLKDTLG 255          
BLAST of mRNA_M-pyrifera_M_contig11595.3309.1 vs. uniprot
Match: A0A7S2V5P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P8_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.570e-23
Identity = 77/220 (35.00%), Postives = 113/220 (51.36%), Query Frame = 0
Query:    1 MFNDIGTKDNRFGMLVSDPTTGKPCKYGAVMECAQRKLLPDGRQYVLNQAIERFRVLKMVKSVPYTVMEVEVGIPDNEPFEGEPSKWGAEEGMLVEELEEQVFSTVNSVVELMNKLSPPADPSE-NRTLSEWFLRYSPKAKRDAAEDDGEVGEDDIKKKEDERRMNFSFAVSEMIAMAPHTKQLLLQSRSTAYRLMATREILVKAQKELAAKSSLKDTLG 219
            M NDI  KD +FGM + D   G     G +M   QR LL DGRQ ++N+ +ERFR+L++ +  PYT+  VE+ I D+    G P          +  +EEQV+  +  VV L NK+       + ++ L+    RYS         D G   E D +     R  +FS AV +M+ + P  KQ++LQ+ +T  RL     +L   +K LAA+S+LKD L 
Sbjct:  138 MMNDIQKKDEKFGMAMVDNRNGGLMSVGTIMRVTQRSLLEDGRQLIVNEGVERFRILELKQQKPYTIAAVEI-IDDDMDLHGVP----------LASIEEQVWECLQDVVRLSNKMQKTQKSIQMSKPLTYLAPRYS---------DTGLTLELDRR-----RITDFSLAVLDMLDIPPLLKQMMLQTTNTYDRLEFQLSLLDPTRKLLAAQSALKDALN 332          
BLAST of mRNA_M-pyrifera_M_contig11595.3309.1 vs. uniprot
Match: M1V6S3_CYAM1 (Similar to ATP-dependent proteinase BsgA n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6S3_CYAM1)

HSP 1 Score: 72.8 bits (177), Expect = 1.970e-11
Identity = 77/235 (32.77%), Postives = 110/235 (46.81%), Query Frame = 0
Query:    1 MFNDIGTKDNRFGMLVSDPTTGKPCKYGAVMECAQRKLLPDGRQYVLNQAIERFRVLKMVKSVPYTVMEVE-----VGIPDNEPF-----EGEPSKWGAEEGMLVEE----LEEQVFSTVNSVVELMNKLSPPADPSENR--TLSEWFLRYSPKAKRDAAEDDGEVGEDDIKKKEDERRMNFSFAVSEMIAMAPHTKQLLLQSRSTAYRLMATREILVKAQKELAAKSSLKDTLG 219
            MF  I   D RFG+++ D         G + E    + L DGR    +   ERFRVLK  K  PY V  VE     V I   E       E  P     E   + ++    LE +V+S +  V+ L NKL        NR  +LS+  +  SP+      E  G +  +    +   R+  FSFAVS ++ M    +QLLLQ+RSTA RL+   ++L  A++ LAA+ ++K  LG
Sbjct:  158 MFQRIREGDGRFGIVMYDKDRNAHAAVGTMAEINVYEPLADGRIMTSSIGRERFRVLKYTKDSPYLVALVEYFDDEVCIESVEQILAALKEPLPQSGDQETSRISKQSLTLLERRVWSALGDVLRLSNKLY-------NRVVSLSKLVVDNSPETVLSIPE--GHLDPE----QNFHRQKLFSFAVSSILDMPVRQQQLLLQTRSTAKRLLKQAQLLEGARQYLAAQVTIKKALG 379          
BLAST of mRNA_M-pyrifera_M_contig11595.3309.1 vs. uniprot
Match: A0A2W4I383_9BACT (ATP-dependent protease n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A2W4I383_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 4.110e-6
Identity = 40/137 (29.20%), Postives = 67/137 (48.91%), Query Frame = 0
Query:    1 MFNDIGTKDNRFGMLVSDPTTGKPCKYGAVMECAQRKLLPDGRQYVLNQAIERFRVLKMVKSVPYTVMEVEVGIPDNEPFEGEPSKWGAEEGMLVEELEEQVFSTVNSVVELMNKLS------PPADPSENRTLSEW 131
            M N +   D +FG+L+ +PT  K    G   E  +   L DGR  ++   ++RFR++++V+ +PY V +VE  + D+ P + +    G           ++V  T+  VV L NKL+      P   P++   LS W
Sbjct:   40 MINTVLEGDKKFGVLLWNPTISKSVNIGCAAEIGEVVKLKDGRMNIMTLGLQRFRIVEIVRQLPYLVGKVE-WLDDSSP-DADTLAIG-----------DRVDKTLRDVVRLANKLTHKENIIPDDLPTDPVLLSFW 163          
BLAST of mRNA_M-pyrifera_M_contig11595.3309.1 vs. uniprot
Match: A0A0K9PV03_ZOSMR (ATP-dependent protease La (LON) domain protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PV03_ZOSMR)

HSP 1 Score: 55.1 bits (131), Expect = 1.990e-5
Identity = 59/215 (27.44%), Postives = 91/215 (42.33%), Query Frame = 0
Query:    9 DNRFGMLVSDPTTGKPCKYGAVMECAQRKLLPDGRQYVLNQAIERFRVLKMVKSVPYTVMEVEVGIPDNEPFEGEPSKWGAEEGMLVEELEEQVFSTVNSVVELMNKLS---PPADPSENRTLSEWFLRYSPKAKRDAAEDDGEVGEDDIKKKEDERR----MNFSFAVSEMIAMAPHTKQLLLQSRSTAYRLMATREILVKAQKELAAKSSLKD 216
            D RFG++ SD + G     G V E  + + L D R +++ +  ERFRV K+V+S+PY V EV          E +PS   ++     EEL  +V + + +V+ + N+L+         E +        Y                   + +  D RR      FSF V      AP  +Q LL+   T  RL   ++ L      L A S++KD
Sbjct:  120 DLRFGVIFSD-SGGSVTGVGCVGEIVKHEKLVDDRFFLICKGQERFRVNKIVRSMPYLVAEVNW-------LEDKPSSLSSDNA---EELAAEVEAHMRNVIRISNRLNGKEASVKDEEEKXXXXXXKEY-------------------VNETMDLRRNMFPTPFSFFVGSTFEGAPKEQQALLELEDTIDRLKREKDTLKNTLNYLTAASAVKD 304          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11595.3309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWB4_ECTSI1.120e-11580.09Putative ATP-dependent proteinase, possible LON pr... [more]
A0A7S2V5P8_9STRA2.570e-2335.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
M1V6S3_CYAM11.970e-1132.77Similar to ATP-dependent proteinase BsgA n=1 Tax=C... [more]
A0A2W4I383_9BACT4.110e-629.20ATP-dependent protease n=1 Tax=Candidatus Melainab... [more]
A0A0K9PV03_ZOSMR1.990e-527.44ATP-dependent protease La (LON) domain protein n=1... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.130.40coord: 1..72
e-value: 2.1E-6
score: 29.2
NoneNo IPR availablePANTHERPTHR46732FAMILY NOT NAMEDcoord: 1..218
IPR003111Lon, substrate-binding domainPFAMPF02190LON_substr_bdgcoord: 11..202
e-value: 9.8E-10
score: 38.7
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 1..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11595contigM-pyrifera_M_contig11595:4219..9549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11595.3309.1mRNA_M-pyrifera_M_contig11595.3309.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11595 3436..9549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11595.3309.1 ID=prot_M-pyrifera_M_contig11595.3309.1|Name=mRNA_M-pyrifera_M_contig11595.3309.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
MFNDIGTKDNRFGMLVSDPTTGKPCKYGAVMECAQRKLLPDGRQYVLNQA
IERFRVLKMVKSVPYTVMEVEVGIPDNEPFEGEPSKWGAEEGMLVEELEE
QVFSTVNSVVELMNKLSPPADPSENRTLSEWFLRYSPKAKRDAAEDDGEV
GEDDIKKKEDERRMNFSFAVSEMIAMAPHTKQLLLQSRSTAYRLMATREI
LVKAQKELAAKSSLKDTLG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003111Lon_substr-bd
IPR015947PUA-like_sf