prot_M-pyrifera_M_contig115888.3301.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115888.3301.1
Unique Nameprot_M-pyrifera_M_contig115888.3301.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
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BLAST of mRNA_M-pyrifera_M_contig115888.3301.1 vs. uniprot
Match: A0A8C4Q8U7_EPTBU (Uncharacterized protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4Q8U7_EPTBU)

HSP 1 Score: 52.4 bits (124), Expect = 4.580e-5
Identity = 33/98 (33.67%), Postives = 52/98 (53.06%), Query Frame = 0 
Query:   38 CIFWDTSVREYRSNGCHVENVSAAGIW-CACDHLT------DFRGRFENLAVENEAIIVQVKEPITKKDLHQNPGVFILMGSLVLLTFLLFLCVSRAD 128
            C+FW  + +++R +GC VEN S + +  C+CDHLT      DF G+ +N   E ++I+  +         H   G+  +  +L LLT+L FL   R D
Sbjct:  939 CVFWSLTEKDWREDGCRVENESNSEMTVCSCDHLTHFAVLLDFMGKSDNYTKEQKSILTIIT--------HIGCGISAIFLALTLLTYL-FLNKLRKD 1027
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115888.3301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8C4Q8U7_EPTBU4.580e-533.67Uncharacterized protein n=1 Tax=Eptatretus burgeri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000203GPS motifPFAMPF01825GPScoord: 37..73
e-value: 7.0E-8
score: 32.9
IPR000203GPS motifPROSITEPS50221GPScoord: 35..94
score: 11.035
NoneNo IPR availableGENE3D2.60.220.50coord: 29..74
e-value: 3.4E-6
score: 28.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..105
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..143
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..124
NoneNo IPR availableTMHMMTMhelixcoord: 106..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115888contigM-pyrifera_M_contig115888:40..468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115888.3301.1mRNA_M-pyrifera_M_contig115888.3301.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115888 40..468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115888.3301.1 ID=prot_M-pyrifera_M_contig115888.3301.1|Name=mRNA_M-pyrifera_M_contig115888.3301.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
MPTSDSTLIAPLIASLVAPDAAKSGGAGSVMTVATASCIFWDTSVREYRS
NGCHVENVSAAGIWCACDHLTDFRGRFENLAVENEAIIVQVKEPITKKDL
HQNPGVFILMGSLVLLTFLLFLCVSRADAVQHRRFAQALMEDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000203GPS