mRNA_M-pyrifera_M_contig115884.3299.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: A0A2E7D0D1_9PLAN (HlyD_D23 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D0D1_9PLAN) HSP 1 Score: 102 bits (255), Expect = 2.720e-23 Identity = 56/162 (34.57%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 13 SSATVTVDSCAVKFVNHSTYATQTPGIIAELPFEEGDIVQAGDLIVQLRDDVAQANLNLRAAQAKMRLPIAIAEKEREAAKIGYESAVRANKSFDNSFPASEVDRLKLIFDARILQVTQAEEEFNLSPYVKKQAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
SS V + C VK ++ + +++ GII + +EG+ ++ GD VQ+RD+V +A+L + A + I +EK + A++ YE A++AN+ DN+ PA E+ L+L +LQ+ QA ++ +K+ L +Y V A F+G+VT+VHK +GE+V
Sbjct: 51 SSRQVVIRECRVKLIDEAVLSSEQTGIIEIIDAQEGETLELGDRAVQIRDNVIRASLEVAEKLASDTVEIDFSEKASQLAQVRYEQALKANQQLDNTIPALELQELRLNVQKTLLQIDQARRNQEVAKLRRKETFETLQTYKVTAPFAGVVTKVHKKVGESV 212
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: A0A1I3G5U8_9PLAN (HlyD family secretion protein n=1 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3G5U8_9PLAN) HSP 1 Score: 98.6 bits (244), Expect = 8.210e-22 Identity = 57/152 (37.50%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 52 FVNHSTYATQTPGIIAELPFEEGDIVQAGDLIVQLRDDVAQANLNLRAAQAKMRLPIAIAEKEREAAKIGYESAVRANKSFDNS---FPASEVDRLKLIFDARILQVTQAEEEFNLSPYVKKQAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
FV+ T++ G+IA++P +EG+ ++AG +VQL+D+V +A L + A+A+ PI +A K E A++ YE+++ AN+ +S +P + + RLKL +A L+V +AE EF ++ + QA AE+ S+ + +G+VT+V KH GE V
Sbjct: 36 FVDRVTFSVDRTGVIAKVP-KEGEQLEAGQTVVQLKDEVPRAMLAVAEAKAQNDAPIEVASKTAEYARLDYEASLEANRKAGSSVAAYPPTHIARLKLNMEASDLKVKEAETEFEINRLSRDQAIAEMESFRIVTGINGVVTQVFKHPGEGV 186
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: UPI0014226596 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014226596) HSP 1 Score: 81.6 bits (200), Expect = 1.670e-15 Identity = 47/142 (33.10%), Postives = 83/142 (58.45%), Query Frame = 1
Query: 73 ATQTPGIIAELPFEEGDIVQAGDLIVQLRDDVAQANLNLRAAQAKMRLPIAIAEKEREAAKIGYESAVRANKSFDNSFPASEVDRLKLIFDARILQVTQAEEEFNLSPYVKKQAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
A PG++A + EEG +V+ G+L+V+LR ++ +A L + +A + + A+ + + ++ + A AN+ + P E+DRL+ D +LQ+ QAE E L+ K+A+A + + + A F+G+VT V K +GEAV
Sbjct: 53 AADQPGVLAVVVPEEGQLVEKGELLVELRAEILKAALAVAQEEASSDVNLRFAQAQLKVSQAELDKAEDANRRVIGTVPLVELDRLRFTRDRAMLQIEQAEHEQVLNNLRVKEAKARVEALQIRAPFTGVVTEVTKSVGEAV 194
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: A0A1G3AK90_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium RBG_16_64_12 TaxID=1801971 RepID=A0A1G3AK90_9BACT) HSP 1 Score: 63.2 bits (152), Expect = 8.870e-9 Identity = 43/172 (25.00%), Postives = 86/172 (50.00%), Query Frame = 1
Query: 25 VTVDSCAVKFVNHSTYATQTPGIIAELPFEEGDIVQAGDLIVQLRD-------DVAQANLNLRAAQAKMRLPIAIAEKEREAAKIGYESAVRANKSFDNSFPASEVDRLKLIFDARILQVTQAEEEFNLSPYVKK-------QAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
+ + S +K + + G++A + EEG +V+ G+L+ Q+ D D + L + A+ + A+K E AK + ++ + +++ S SE+DRL+L+ + +L+V QAE EF ++ + ++ AE ++ + A G+V +V++ GE V
Sbjct: 26 IEIPSALIKPIEQVDVPAREAGVLATVNVEEGQMVEEGELLAQIVDTEARIARDRVKGELEIARRNAENDVNTRFAKKSVEVAKAELKRSMESIETYAKSISDSEMDRLRLVVERAVLEVEQAEREFEIAGFTREIKESDHQAAEEKVERCRIAAPLGGVVVQVNRRRGEWV 197
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: A0A2G2KP11_9BACT (HlyD_D23 domain-containing protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2KP11_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 3.200e-8 Identity = 44/170 (25.88%), Postives = 86/170 (50.59%), Query Frame = 1
Query: 25 VTVDSCAVKFVNHSTYATQTPGIIAELPFEEGDIVQAGDLI-------VQLRDDVAQANLNLRAAQAKMRLPIAIAEKEREAAKIGYESAVRANKSFDNSFPASEVDRLKLIFDARILQVTQAEEEFNLSPYVK--KQA-----EAELLSYAVHAKFSGLVTRVHKHIGE 492
+ V+S +K + Q GI+ + EG +V+ G L+ ++L A+A+ + +A + + +K E AK + + +N +NS PA E+DRL+L+ + +IL++ QA E+ ++ + KQA E +L+ + + + SG+V ++ + GE
Sbjct: 27 IQVESTLLKIIEIVRVPAQESGILESVNVREGTVVEKGQLLAKIGSREIELALIKAKADYLISKREAANDISVRFIKKSTEVAKTELKRSEDSNAEVENSIPAIEIDRLRLLVEEKILEMEQALEKLEIAKLIAELKQADLRIVEEKLMKHQIISPISGMVVQLFQRTGE 196
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: A0A3E0P7A2_9BACT (HlyD family efflux transporter periplasmic adaptor subunit n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0P7A2_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 6.310e-8 Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 1
Query: 19 ATVTVDSCAVKFVNHSTYATQTPGIIAELPFEEGDIVQAGDLIVQLRD-----DVAQANLNLRAA--QAKMRLPIAIAEKEREAAKIGYESAVRANKSFDNSFPASEVDRLKLIFDARILQVTQAEEEFNLSPYVK-------KQAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
A V V S VK + + G++ ++ EG +V+ G I ++ D D A L L AA A+ + + A K E A + AV++ + +S SE+D+L+L+ + IL++ QAE EF+L+ + + AE ++ + A +G V+ V +H GE V
Sbjct: 25 AEVEVSSVLVKLIEQVEVPAREAGVLEQVDVREGQMVEEGAEIARIDDSAPRLDKRTAELELVAAAKMAENDVKVRYARKSAEVADAELQRAVKSKQRLPDSVTDSEMDQLRLMAEKTILEIEQAELEFDLAKTTRALKENDVQIAEHDISQRKITAPLAGFVSEVSRHRGEWV 198
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: A0A6N6LD69_9PROT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6N6LD69_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 1.220e-7 Identity = 42/138 (30.43%), Postives = 68/138 (49.28%), Query Frame = 1
Query: 88 GIIAELPFEEGDIVQAGDLIVQLRDDVAQANLNLRAAQAKMRLPIAIAEKEREAAKIGYESAVRANKSFDNSF-PASEVDRLKLIFDARILQVTQAEEEFNLSPYVKKQAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
G+IA +P E GDIVQAG ++V LRD V +A + + ++A+ I A+ R + E RA F A +D+ + + ++ QA + +S A+A L +H+ F G+VT + +GE V
Sbjct: 40 GVIAHIPVERGDIVQAGQVLVSLRDTVERAQIGIARSRAQTEADIRAAQANRV---LADERLKRARDLHQRQFISAQALDQAEAEHRVAVEKLAQARDFQQISQRELDLAQARLGERVLHSPFDGIVTDRYLSVGERV 174
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: A0A0J1B3V9_RHOIS (Multidrug efflux pump n=1 Tax=Rhodopirellula islandica TaxID=595434 RepID=A0A0J1B3V9_RHOIS) HSP 1 Score: 58.9 bits (141), Expect = 3.330e-7 Identity = 48/172 (27.91%), Postives = 76/172 (44.19%), Query Frame = 1
Query: 25 VTVDSCAVKFVNHSTYATQTPGIIAELPFEEGDIVQAGDLIVQLRD-------DVAQANLNLRAAQAKMRLPIAIAEKEREAAKIGYESAVRANKSFDNSFPASEVDRLKLIFDARILQVTQAEEEFNLSPY-------VKKQAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
+ +++ V A G + L EG V G+L+VQL D + AQA A Q+ + AE+ RE E ++ AN+ F NS A+E+DRL+L+ D L + QA +E ++ + + AE + + + + SG V V GE V
Sbjct: 52 IVIEAAQATLVTDLPLAAPVAGRVRSLSVVEGQQVSKGELLVQLDDRRAKAELEAAQAASQAAALQSTSDVDQRYAERTREVRMRELEQSLDANRRFQNSVTATEIDRLQLVIDQAGLSIEQAHKESEIAEANANEKQSLVRMAELRVAEHRLESPLSGSVAEVTVSPGEWV 223
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: A0A2G1WDM7_9BACT (Hemolysin D n=2 Tax=Rhodopirellula bahusiensis TaxID=2014065 RepID=A0A2G1WDM7_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 6.190e-7 Identity = 51/175 (29.14%), Postives = 74/175 (42.29%), Query Frame = 1
Query: 16 SATVTVDSCAVKFVNHSTYATQTPGIIAELPFEEGDIVQAGDLIVQLRDDVAQANLNLRAAQAKMRLPIAI-------AEKEREAAKIGYESAVRANKSFDNSFPASEVDRLKLIFDARILQVTQAEEEFNLSPY-------VKKQAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
SA + ++ A G + L EG V DL+VQL D A+A L A AK A AE+ RE E ++ ANK + NS A+E+DRL+L+ D L + QA +E ++ + K AE +L + + + G V GE V
Sbjct: 49 SAAIVIEGAQAMLATDLALAAPIAGRVTTLAVAEGQRVSENDLLVQLDDRRARAELAAAEAAAKAAELSAASDVDQRYAERTREVRMRELEQSIDANKRYKNSVTATEIDRLQLVIDQAGLSIEQARKELEVAEARASEKRSLLKMAELKLRDHRIGSPIVGSVAETMVSAGEWV 223
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Match: M5RWB2_9BACT (Multidrug efflux pump n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5RWB2_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 8.550e-7 Identity = 49/173 (28.32%), Postives = 77/173 (44.51%), Query Frame = 1
Query: 22 TVTVDSCAVKFVNHSTYATQTPGIIAELPFEEGDIVQAGDLIVQLRDDVAQANL---NLRAAQAKMRLPIAI----AEKEREAAKIGYESAVRANKSFDNSFPASEVDRLKLIFDARILQVTQAEEEFNLSPY-------VKKQAEAELLSYAVHAKFSGLVTRVHKHIGEAV 498
T+ ++ V T A G + + EG V D++VQL D A+A L A AK+R + AE+ RE E ++ ANK + NS A+E+DRL+L+ D L + QA +E ++ + + A+ L + V + G V +GE V
Sbjct: 56 TIEIEGAQTTLVTDLTLAAPISGRVMSVAVTEGQEVSKSDVLVQLDDRRAKAELAAAESAAMAAKLRSTSDVDQRYAERTREVRMRELEQSIDANKRYQNSVTATEIDRLQLVIDQAGLSIEQARKELEVAEAQADEKLSLVEMAKLRLSEHRVDSPVEGNVAETMVSVGEWV 228 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115884.3299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115884.3299.1 >prot_M-pyrifera_M_contig115884.3299.1 ID=prot_M-pyrifera_M_contig115884.3299.1|Name=mRNA_M-pyrifera_M_contig115884.3299.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp PSSSSSATVTVDSCAVKFVNHSTYATQTPGIIAELPFEEGDIVQAGDLIVback to top mRNA from alignment at M-pyrifera_M_contig115884:62..559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115884.3299.1 ID=mRNA_M-pyrifera_M_contig115884.3299.1|Name=mRNA_M-pyrifera_M_contig115884.3299.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig115884:62..559+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115884:62..559+ >mRNA_M-pyrifera_M_contig115884.3299.1 ID=mRNA_M-pyrifera_M_contig115884.3299.1|Name=mRNA_M-pyrifera_M_contig115884.3299.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig115884:62..559+ (Macrocystis pyrifera P11B4 male)back to top |