prot_M-pyrifera_M_contig115853.3289.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115853.3289.1
Unique Nameprot_M-pyrifera_M_contig115853.3289.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length44
Homology
BLAST of mRNA_M-pyrifera_M_contig115853.3289.1 vs. uniprot
Match: A0A538CSB1_9ACTN (DUF2510 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CSB1_9ACTN)

HSP 1 Score: 52.4 bits (124), Expect = 7.260e-8
Identity = 21/30 (70.00%), Postives = 22/30 (73.33%), Query Frame = 0
Query:    6 EKGWHPDPTERHELRWHDGSEWTHHVADGG 35
            E GW PDP  RHELRWHDG  WT HV+D G
Sbjct:    2 EPGWQPDPARRHELRWHDGENWTVHVSDNG 31          
BLAST of mRNA_M-pyrifera_M_contig115853.3289.1 vs. uniprot
Match: UPI001C630CC5 (DUF2510 domain-containing protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C630CC5)

HSP 1 Score: 53.5 bits (127), Expect = 4.170e-7
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    4 GWEKGWHPDPTERHELRWHDGSEWTHHVADGGEASTD 40
            G + GWH DP +RH+LR+HDG +WT HVADGG  S D
Sbjct:   15 GRDMGWHGDPWQRHQLRFHDGGQWTEHVADGGFCSLD 51          
BLAST of mRNA_M-pyrifera_M_contig115853.3289.1 vs. uniprot
Match: A0A8J3ER78_9ACTN (Uncharacterized protein n=1 Tax=Egicoccus halophilus TaxID=1670830 RepID=A0A8J3ER78_9ACTN)

HSP 1 Score: 51.6 bits (122), Expect = 1.970e-6
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 0
Query:    9 WHPDPTERHELRWHDGSEWTHHVADGGEASTD 40
            WHPDPT +H+ RW DG+ WT HVAD GEA  D
Sbjct:    7 WHPDPTGKHDHRWWDGTTWTEHVADAGEAKVD 38          
BLAST of mRNA_M-pyrifera_M_contig115853.3289.1 vs. uniprot
Match: A0A6I3WSR8_9ACTN (DUF2510 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3WSR8_9ACTN)

HSP 1 Score: 47.4 bits (111), Expect = 6.820e-5
Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 0
Query:    9 WHPDPTERHELRWHDGSEWTHHVADGGEASTD 40
            WHPDP  RH+LR+ DGS+WT HV+D G    D
Sbjct:    8 WHPDPMNRHQLRYWDGSQWTEHVSDNGVTGVD 39          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115853.3289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A538CSB1_9ACTN7.260e-870.00DUF2510 domain-containing protein n=1 Tax=Actinomy... [more]
UPI001C630CC54.170e-762.16DUF2510 domain-containing protein n=1 Tax=Iamia sp... [more]
A0A8J3ER78_9ACTN1.970e-665.63Uncharacterized protein n=1 Tax=Egicoccus halophil... [more]
A0A6I3WSR8_9ACTN6.820e-559.38DUF2510 domain-containing protein n=2 Tax=root Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018929Domain of unknown function DUF2510PFAMPF10708DUF2510coord: 8..38
e-value: 2.6E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115853contigM-pyrifera_M_contig115853:366..497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115853.3289.1mRNA_M-pyrifera_M_contig115853.3289.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115853 366..497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115853.3289.1 ID=prot_M-pyrifera_M_contig115853.3289.1|Name=mRNA_M-pyrifera_M_contig115853.3289.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=44bp
MENGWEKGWHPDPTERHELRWHDGSEWTHHVADGGEASTDEGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018929DUF2510