mRNA_M-pyrifera_M_contig115851.3288.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig115851.3288.1
Unique NamemRNA_M-pyrifera_M_contig115851.3288.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A232LXK7_9EURO (NAD-dependent protein deacetylase n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232LXK7_9EURO)

HSP 1 Score: 84.3 bits (207), Expect = 1.220e-17
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPD-GIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            R  V+ GAG+STS GIPDFRSPD G+Y  L+ +G     LPHPEA+F I+FFRENP+PF+A+AR L+
Sbjct:   38 RFIVMTGAGISTSAGIPDFRSPDTGLYANLAHLG-----LPHPEAMFDINFFRENPQPFYALARELY 99
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A5A8DXS1_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DXS1_CAFRO)

HSP 1 Score: 84.7 bits (208), Expect = 1.220e-17
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPDGIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            RI VL GAG+S S GIPDFRS  GIY+ L+  GV+ S L  PE +F I+FFRENPEPF+A +  LF
Sbjct:  251 RIAVLAGAGLSVSAGIPDFRSSAGIYKNLAKFGVNASELERPEDLFCIEFFRENPEPFYAASAMLF 316
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A5A8E1B9_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E1B9_CAFRO)

HSP 1 Score: 84.7 bits (208), Expect = 1.260e-17
Identity = 40/66 (60.61%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPDGIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            RI VL GAG+S S GIPDFRS  GIY+ L+  GV+ S L  PE +F I+FFRENPEPF+A +  LF
Sbjct:  827 RIAVLAGAGLSVSAGIPDFRSSAGIYKNLAKFGVNASELERPEDLFCIEFFRENPEPFYAASAMLF 892
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A507QRH5_MONPU (NAD-dependent protein deacetylase n=1 Tax=Monascus purpureus TaxID=5098 RepID=A0A507QRH5_MONPU)

HSP 1 Score: 82.4 bits (202), Expect = 5.310e-17
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPD-GIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            RI V+ GAG+STS GIPDFRSPD GIY  L+ +      LP PEAVFSI FFRENP PF+A+AR L+
Sbjct:   37 RIVVMVGAGISTSAGIPDFRSPDTGIYSNLAHL-----ELPDPEAVFSITFFRENPRPFYALARELY 98
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A443HHS1_BYSSP (NAD-dependent protein deacetylase n=2 Tax=Byssochlamys spectabilis TaxID=264951 RepID=A0A443HHS1_BYSSP)

HSP 1 Score: 82.0 bits (201), Expect = 8.220e-17
Identity = 41/67 (61.19%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPD-GIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            RI V+CGAG+STS GIPDFRSPD GIY  L+ +      LP PEAVF I FFR+NP PF+A+A  L+
Sbjct:   37 RIVVMCGAGISTSAGIPDFRSPDTGIYSNLAHL-----DLPDPEAVFDISFFRQNPRPFYALAHELY 98
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A1V1T690_9FUNG (NAD-dependent protein deacetylase n=2 Tax=Fungi TaxID=4751 RepID=A0A1V1T690_9FUNG)

HSP 1 Score: 81.6 bits (200), Expect = 1.190e-16
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPD-GIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            RI V+ GAG+ST+ GIPDFRSP  G+Y  L+ +     +LPHPEAVF I+FFRENP+PF+A+A+ L+
Sbjct:   37 RIVVMAGAGISTAAGIPDFRSPKTGLYHNLARL-----NLPHPEAVFDIEFFRENPQPFYALAKELY 98
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A2P6TDX3_CHLSO (NAD-dependent deacetylase sirtuin-2 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TDX3_CHLSO)

HSP 1 Score: 81.3 bits (199), Expect = 1.980e-16
Identity = 40/67 (59.70%), Postives = 46/67 (68.66%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPD-GIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            RI  +CGAG+S S GIPDFRSP  G+Y RL   G     LPHP AVF IDFFR NP PF+ +A+ LF
Sbjct:  148 RIICMCGAGISVSAGIPDFRSPGTGLYHRLEEYG-----LPHPHAVFEIDFFRRNPRPFYTLAKELF 209
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A4S3JDV5_9EURO (NAD-dependent protein deacetylase n=1 Tax=Aspergillus tanneri TaxID=1220188 RepID=A0A4S3JDV5_9EURO)

HSP 1 Score: 80.9 bits (198), Expect = 2.010e-16
Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPD-GIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSL 195
            RI V+ GAG+STS GIPDFRSPD GIY  L+ +      LP PEAVF I FFRENP+PF+A+AR L
Sbjct:   37 RIVVMVGAGISTSAGIPDFRSPDTGIYANLAFL-----DLPDPEAVFDISFFRENPQPFYALAREL 97
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BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A0U1LQS0_TALIS (NAD-dependent protein deacetylase n=2 Tax=Talaromyces sect. Islandici TaxID=2752542 RepID=A0A0U1LQS0_TALIS)

HSP 1 Score: 80.9 bits (198), Expect = 2.030e-16
Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPD-GIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            RI V+ GAG+STS GIPDFRSPD GIY  L+ +      LP PEAVFSI+FFRENP PF+ +AR L+
Sbjct:   37 RIVVMTGAGISTSAGIPDFRSPDTGIYSNLAHL-----DLPDPEAVFSINFFRENPVPFYTLARELY 98
[Close]
BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Match: A0A8H7WPX3_9HELO (Deacetylase sirtuin-type domain-containing protein n=1 Tax=Cadophora sp. M221 TaxID=2774352 RepID=A0A8H7WPX3_9HELO)

HSP 1 Score: 80.9 bits (198), Expect = 2.230e-16
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 1 
Query:    1 RIGVLCGAGVSTSCGIPDFRSPD-GIYRRLSSMGVDPSSLPHPEAVFSIDFFRENPEPFWAVARSLF 198
            RI V+ GAG+STS GIPDFRSPD G+Y  L+ +      LPHPEAVF I FFRE PEPF+ +A+ L+
Sbjct:   36 RIVVMTGAGISTSAGIPDFRSPDTGLYSNLARL-----DLPHPEAVFDISFFREKPEPFYVLAKELY 97
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115851.3288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A232LXK7_9EURO1.220e-1761.19NAD-dependent protein deacetylase n=1 Tax=Elaphomy... [more]
A0A5A8DXS1_CAFRO1.220e-1760.61Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A5A8E1B9_CAFRO1.260e-1760.61Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A507QRH5_MONPU5.310e-1764.18NAD-dependent protein deacetylase n=1 Tax=Monascus... [more]
A0A443HHS1_BYSSP8.220e-1761.19NAD-dependent protein deacetylase n=2 Tax=Byssochl... [more]
A0A1V1T690_9FUNG1.190e-1658.21NAD-dependent protein deacetylase n=2 Tax=Fungi Ta... [more]
A0A2P6TDX3_CHLSO1.980e-1659.70NAD-dependent deacetylase sirtuin-2 n=1 Tax=Chlore... [more]
A0A4S3JDV5_9EURO2.010e-1663.64NAD-dependent protein deacetylase n=1 Tax=Aspergil... [more]
A0A0U1LQS0_TALIS2.030e-1662.69NAD-dependent protein deacetylase n=2 Tax=Talaromy... [more]
A0A8H7WPX3_9HELO2.230e-1659.70Deacetylase sirtuin-type domain-containing protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115851contigM-pyrifera_M_contig115851:319..516 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score82.4
Seed ortholog evalue8.6e-14
Seed eggNOG ortholog264951.V5GCL6
Preferred nameHST2
KEGG rclassRC00033,RC00096,RC00485
KEGG koko:K11121,ko:K11412
KEGG ReactionR00102,R10633
KEGG Pathwayko00760,ko01100,ko04213,map00760,map01100,map04213
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000122,GO:0000183,GO:0000228,GO:0000775,GO:0000785,GO:0000790,GO:0000792,GO:0001300,GO:0003674,GO:0003824,GO:0004407,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0006325,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0016043,GO:0016458,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0017136,GO:0019213,GO:0019219,GO:0019222,GO:0019538,GO:0030702,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031618,GO:0031934,GO:0031935,GO:0031936,GO:0031938,GO:0031939,GO:0031974,GO:0031981,GO:0032502,GO:0032879,GO:0033043,GO:0033044,GO:0033553,GO:0033558,GO:0034728,GO:0034979,GO:0035601,GO:0036166,GO:0036211,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045910,GO:0045934,GO:0045935,GO:0045950,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0051049,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0060255,GO:0060303,GO:0060968,GO:0060969,GO:0065007,GO:0065008,GO:0070013,GO:0070932,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0098687,GO:0098732,GO:0140096,GO:1900392,GO:1901564,GO:1902275,GO:1902377,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905268,GO:1990141,GO:1990421,GO:1990619,GO:1990707,GO:2000112,GO:2000113,GO:2001141,GO:2001251
EggNOG free text desc.Belongs to the sirtuin family. Class I subfamily
EggNOG OGs20B1U@147545,38CHF@33154,3NVQX@4751,3QP7R@4890,3S586@5042,COG0846@1,KOG2682@2759
COG Functional cat.BK
Best tax levelEurotiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03036
Exons1
Model size198
Cds size198
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815675.045184-CDS-M-pyrifera_M_contig115851:318..5161622815675.045184-CDS-M-pyrifera_M_contig115851:318..516Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115851 319..516 +
1692277516.2333207-CDS-M-pyrifera_M_contig115851:318..5161692277516.2333207-CDS-M-pyrifera_M_contig115851:318..516Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115851 319..516 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115851.3288.1prot_M-pyrifera_M_contig115851.3288.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig115851 319..516 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig115851.3288.1

>prot_M-pyrifera_M_contig115851.3288.1 ID=prot_M-pyrifera_M_contig115851.3288.1|Name=mRNA_M-pyrifera_M_contig115851.3288.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp
RIGVLCGAGVSTSCGIPDFRSPDGIYRRLSSMGVDPSSLPHPEAVFSIDF
FRENPEPFWAVARSLF
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mRNA from alignment at M-pyrifera_M_contig115851:319..516+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig115851.3288.1 ID=mRNA_M-pyrifera_M_contig115851.3288.1|Name=mRNA_M-pyrifera_M_contig115851.3288.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig115851:319..516+ (Macrocystis pyrifera P11B4 male)
CGCATTGGGGTATTGTGTGGAGCTGGTGTATCTACGAGTTGTGGAATTCC
CGATTTCCGATCTCCTGATGGGATCTACCGTCGTCTGAGTTCCATGGGCG
TGGATCCTTCTTCTCTTCCCCACCCCGAAGCCGTTTTTTCGATCGATTTC
TTCCGGGAAAATCCAGAGCCATTCTGGGCTGTCGCGCGTTCTCTGTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig115851:319..516+

>mRNA_M-pyrifera_M_contig115851.3288.1 ID=mRNA_M-pyrifera_M_contig115851.3288.1|Name=mRNA_M-pyrifera_M_contig115851.3288.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig115851:319..516+ (Macrocystis pyrifera P11B4 male)
CGCATTGGGGTATTGTGTGGAGCTGGTGTATCTACGAGTTGTGGAATTCC
CGATTTCCGATCTCCTGATGGGATCTACCGTCGTCTGAGTTCCATGGGCG
TGGATCCTTCTTCTCTTCCCCACCCCGAAGCCGTTTTTTCGATCGATTTC
TTCCGGGAAAATCCAGAGCCATTCTGGGCTGTCGCGCGTTCTCTGTTTCG
CATTGGGGTATTGTGTGGAGCTGGTGTATCTACGAGTTGTGGAATTCCCG
ATTTCCGATCTCCTGATGGGATCTACCGTCGTCTGAGTTCCATGGGCGTG
GATCCTTCTTCTCTTCCCCACCCCGAAGCCGTTTTTTCGATCGATTTCTT
CCGGGAAAATCCAGAGCCATTCTGGGCTGTCGCGCGTTCTCTGTTT
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