prot_M-pyrifera_M_contig11585.3287.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11585.3287.1
Unique Nameprot_M-pyrifera_M_contig11585.3287.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: D7G2G1_ECTSI (RuBisCo_chap_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G1_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 4.370e-68
Identity = 110/150 (73.33%), Postives = 120/150 (80.00%), Query Frame = 0
Query:    3 RIYTVACALMLAGARGFVVNPTLRAPCANRGIGTETAGRRSSSIAAAPLEGAHGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPKNE 152
            R   VACAL+LAGAR FVVNPTL    A  G+G    GR  S   AAPLEG+HGMRSRFLPVDQ+DDE FAPRIVQVAGA+P +TVAD+MAVGF+P  EMGMW YDFSDP GPQLGTVAVPGGE V NM+EPVAIV PN DLNIQMP +E
Sbjct:    7 RTCVVACALLLAGARAFVVNPTLLPSRAPGGVGAS--GRTGSLSMAAPLEGSHGMRSRFLPVDQMDDEVFAPRIVQVAGALPEITVADIMAVGFTPAPEMGMWQYDFSDPEGPQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDE 154          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: A0A6H5JHR7_9PHAE (RuBisCo_chap_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR7_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 8.210e-67
Identity = 110/153 (71.90%), Postives = 119/153 (77.78%), Query Frame = 0
Query:    3 RIYTVACALMLAGARGFVVNPTL---RAPCANRGIGTETAGRRSSSIAAAPLEGAHGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPKNE 152
            R   VACAL+LAGAR FVVNPTL   RAP         T+GR  S   AAPLEGAHGMRSRFLPVDQ+DDE FAPRIVQVAG +P +TVAD+MAVGF+P  EMGMW YDFSDP GPQLGTVAVPGGE V  M+EPVAIV PN DLNIQMP +E
Sbjct:    7 RTCVVACALLLAGARAFVVNPTLLSSRAPGGGSAAAVGTSGRTGSLSMAAPLEGAHGMRSRFLPVDQMDDEVFAPRIVQVAGVLPEITVADIMAVGFTPAPEMGMWQYDFSDPEGPQLGTVAVPGGEQVFKMKEPVAIVCPNDDLNIQMPNDE 159          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: D7G2G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G3_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 6.810e-32
Identity = 59/78 (75.64%), Postives = 66/78 (84.62%), Query Frame = 0
Query:   75 RIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPKNE 152
            R+ QVAGA+P +TVA +MAVGF+P  EMGMW YDFSDP GPQLGTVAVPGGE V NM+EPVAIV PN DLNIQMP +E
Sbjct:    6 RMEQVAGALPEITVAYIMAVGFTPAPEMGMWQYDFSDPEGPQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDE 83          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: A0A836C9L5_9STRA (RuBisCo_chap_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.960e-29
Identity = 65/142 (45.77%), Postives = 84/142 (59.15%), Query Frame = 0
Query:   11 LMLAGARGFVVNPTLRAPCANRGIGTETAGRRSSSIAAAPLE-GAHGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPKN 151
            L +  A GFV  P LRA C      T T G RS+ + A   + G HG  SRFLP+ Q+      PR V +AGA PGLT  D+ A     PAE G W YDF+DP GPQ+GTVA+PGG+ V ++ +PV IV  +  L I +P++
Sbjct:   11 LYVDAALGFVPAPALRA-CRQARQATATCGSRSTQMVAQMEQTGLHGTGSRFLPIVQIGAREHYPRTVCIAGAYPGLTAEDIAAPTSGEPAEQGTWQYDFTDPEGPQMGTVALPGGDTVTDLIDPVIIVAASDSLGISLPQD 151          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: A0A7S3LGB5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGB5_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.840e-26
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 0
Query:   34 IGTETAGRRSSSIAAAPLEGAHGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPK 150
            I T+      S++A +  +  HG  + FLP+ QL+ + FAPRIVQ+AG  PGL+ AD MAV      + G W YDFSDP GPQLGTVA+ G ++V +  +PV I+  +  + I++PK
Sbjct:   32 IATDITRLHQSALAGSARK--HGQDACFLPIKQLEQDYFAPRIVQIAGGYPGLSKADFMAVTSEQAPDQGQWTYDFSDPDGPQLGTVALEGSQIVHDCEDPVVIIAEHPSIGIELPK 146          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: A0A1E7FB03_9STRA (RuBisCo_chap_C domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FB03_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.180e-26
Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = 0
Query:   20 VVNPTLRAPCANRGIGTETAGRRSSSIAAAPLEGAHGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPKN 151
            V+ P L    A+R I       + S + AA     HG  S +LP+ QLD + + PRIVQ+AGA PG+T  +  A    PP E G W+YDFSDP GPQLGTVA+ G  +V    +PV I+  +T L+I +P++
Sbjct:   10 VLTPALAWIPASRSISKN----KISQLNAASYGSLHGDNSCYLPLKQLDQDYYGPRIVQIAGAYPGITREEFYATQSEPPPEPGQWNYDFSDPDGPQLGTVAIEGSNVVAVCEDPVVIIAEHTSLSIPLPES 137          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: A0A7S2FVK7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVK7_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.080e-25
Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 0
Query:   41 RRSSSIAAAPLEGAHGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPKN 151
            R + +++  P  G HG  S+F+P+ QLD E +APR VQVAG +PGLT  +  A   +P A  G W +DFSDP GPQ+GT+A PG   VQ   +PVAIV  +  L+I +  N
Sbjct:   39 RPAPTMSEGPPMGQHGTGSKFMPLTQLDSEEYAPRTVQVAGVLPGLTKEEFYAPQSAPAAPPGQWQFDFSDPEGPQMGTIAFPGSANVQACEDPVAIVTNSAHLHISLANN 149          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: B7FTB2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTB2_PHATC)

HSP 1 Score: 105 bits (261), Expect = 2.170e-25
Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 0
Query:   55 HGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPK 150
            HG  S FLP+ QLD + +APRIVQ+AGA PGLT  +   V     AE+G W YDFSDP GPQ+GTVA+ G ELV    +PVAI+  ++ + + +PK
Sbjct:   20 HGQNSCFLPLRQLDQDYYAPRIVQIAGAYPGLTKEEFYGVQSEEAAEVGQWSYDFSDPEGPQVGTVAMDGSELVSFCPDPVAIIAEHSSVGVDLPK 115          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: A0A7S2YFZ8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YFZ8_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.000e-25
Identity = 51/104 (49.04%), Postives = 67/104 (64.42%), Query Frame = 0
Query:   50 PLEGA---HGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPK 150
            PLE     HG  + F+P+ QLD + + PRIVQ+AGA PGLT  + M+V   P  E G W YDFSDP GPQLGTVA+PG E+V    +PV I+  +  + + +PK
Sbjct:   32 PLEAEPKIHGEGACFMPLKQLDQDHYNPRIVQIAGAYPGLTKEEYMSVTSEPSPERGQWTYDFSDPDGPQLGTVALPGSEIVHFAEDPVVIIAEHPSVGVDLPK 135          
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Match: A0A7S3PYS7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYS7_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.530e-24
Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 0
Query:   55 HGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPAEMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPK 150
            HG  S F+P++Q+D+E FAPRI+Q+AG  PG+T  ++++V    PAE G W YDFSDP GPQ+GTVA+PG E++    +P  I+  +  L + +P+
Sbjct:   46 HGESSCFMPLEQVDEEYFAPRIIQIAGMYPGVTKEEILSVTSEQPAEKGQWAYDFSDPDGPQMGTVALPGCEIIDLCEDPAVIIAEHFALGVPLPE 141          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11585.3287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7G2G1_ECTSI4.370e-6873.33RuBisCo_chap_C domain-containing protein n=1 Tax=E... [more]
A0A6H5JHR7_9PHAE8.210e-6771.90RuBisCo_chap_C domain-containing protein n=1 Tax=E... [more]
D7G2G3_ECTSI6.810e-3275.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9L5_9STRA3.960e-2945.77RuBisCo_chap_C domain-containing protein n=1 Tax=T... [more]
A0A7S3LGB5_9STRA2.840e-2644.44Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A1E7FB03_9STRA6.180e-2643.18RuBisCo_chap_C domain-containing protein n=1 Tax=F... [more]
A0A7S2FVK7_9STRA1.080e-2546.85Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B7FTB2_PHATC2.170e-2552.08Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2YFZ8_9STRA7.000e-2549.04Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3PYS7_9STRA1.530e-2446.88Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040858Rubisco accumulation factor 1, C-terminalPFAMPF18087RuBisCo_chap_Ccoord: 62..150
e-value: 9.1E-6
score: 25.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.599

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11585contigM-pyrifera_M_contig11585:5174..8244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11585.3287.1mRNA_M-pyrifera_M_contig11585.3287.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11585 5174..8244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11585.3287.1 ID=prot_M-pyrifera_M_contig11585.3287.1|Name=mRNA_M-pyrifera_M_contig11585.3287.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
MPRIYTVACALMLAGARGFVVNPTLRAPCANRGIGTETAGRRSSSIAAAP
LEGAHGMRSRFLPVDQLDDETFAPRIVQVAGAMPGLTVADLMAVGFSPPA
EMGMWHYDFSDPTGPQLGTVAVPGGELVQNMREPVAIVMPNTDLNIQMPK
NEVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040858Raf1_C