mRNA_M-pyrifera_M_contig115815.3276.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: A0A7S4I9C7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I9C7_9EUKA) HSP 1 Score: 162 bits (409), Expect = 1.910e-45 Identity = 71/119 (59.66%), Postives = 91/119 (76.47%), Query Frame = 1
Query: 4 AAFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGLFSATGYWEISFFFE 360
A+FM+GYM+ AP FGH+SRK RPA LMC+GL WC+A +GT +S +++L+ R + G+GEASF+GLAPTYIDD++P K S WL VFFSMIPIGAA GY +AG+FS W +F FE
Sbjct: 85 ASFMMGYMLFAPLFGHLSRKYRPAALMCIGLAIWCLATLGTAISFNFWTLIIARAVSGIGEASFIGLAPTYIDDIAPPKHHSTWLAVFFSMIPIGAATGYGVAGIFSQFSSWRWTFAFE 203
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: A0A6S7PQ55_LACSI (MFS domain-containing protein n=4 Tax=Lactuca TaxID=4235 RepID=A0A6S7PQ55_LACSI) HSP 1 Score: 120 bits (301), Expect = 9.500e-30 Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 1 TAAFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGLFSATGYWEISFFFE 360
++AFM+G ++ +P F M++ + P L+ VGL W AAIG G+SVG++S+ R L+GVGEASF+ LA +ID+ +P K RS WLG+F+ IP G A+GYV GL + W +F E
Sbjct: 89 SSAFMVGLLIASPIFASMAKSMNPFRLVAVGLLIWTFAAIGCGISVGFWSITVCRMLVGVGEASFISLAAPFIDENAPPKQRSAWLGIFYMCIPTGIALGYVYGGLVGGSYGWRYAFLSE 208
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: A0A2U1Q8Y6_ARTAN (Major facilitator superfamily domain protein n=2 Tax=Anthemideae TaxID=102810 RepID=A0A2U1Q8Y6_ARTAN) HSP 1 Score: 117 bits (294), Expect = 1.250e-28 Identity = 54/120 (45.00%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 1 TAAFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGLFSATGYWEISFFFE 360
++AFM+G +V +P F M++ P L+ VGL W AAIG G+S+G++++ R L+GVGEASF+ LA +ID+ +P RS WLG+F+ IP G A+GYV GL W +FF E
Sbjct: 102 SSAFMVGLLVASPIFASMAKSYNPFRLIAVGLSVWTFAAIGCGISIGFWTITVCRMLVGVGEASFISLAAPFIDENAPATQRSAWLGIFYMCIPTGVALGYVYGGLVGDGYGWRYAFFGE 221
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: A0A7S0CXP1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CXP1_9EUKA) HSP 1 Score: 116 bits (291), Expect = 3.570e-28 Identity = 53/115 (46.09%), Postives = 80/115 (69.57%), Query Frame = 1
Query: 7 AFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGLFSATGYWEISF 351
A+M+GYM+ +P F H + ++ P +LM VGL WC++ IGTGLS+ Y ++L RT GVGEA+F +AP ID +PV +S+W+ VF+ IP+G A+GY++AG + ++G SF
Sbjct: 62 AYMVGYMLASPAFAHFASRMSPLLLMGVGLTAWCISVIGTGLSLEYGTILLARTGTGVGEAAFACMAPPLIDAKAPVAQKSLWMSVFYIFIPVGYAMGYLVAGQWHSSGTVSGSF 176
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: A0A1R2B1B6_9CILI (MFS domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B1B6_9CILI) HSP 1 Score: 114 bits (285), Expect = 2.150e-27 Identity = 56/120 (46.67%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 4 AAFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAG-LFSATGYWEISFFFE 360
++F+LGYMVTAP F H S+K P LMC+GL W VA + TG S Y LL RTL G+GEASF+ LAP I D++P +++W+G+F+ +G A+G+V + A W+ FFFE
Sbjct: 59 SSFILGYMVTAPMFAHYSQKYHPEYLMCIGLTIWSVAVLMTGFSESYIFLLISRTLTGIGEASFVCLAPPVIMDIAPQDKKNLWIGLFYVANVLGYALGFVFGNEIAHALDGWKYPFFFE 178
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: UPI001CB902A5 (probable sphingolipid transporter spinster homolog 2 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB902A5) HSP 1 Score: 113 bits (283), Expect = 3.990e-27 Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 1 TAAFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGLFSATGYWEISFFFE 360
++AFM+G +V +P F +++ + P L+ VGL W +AA G G SV ++SL R LIGVGEASF+ LAP +ID+ +PV R+ LG+FF +G AVGYV GL A+ W +FF E
Sbjct: 80 SSAFMVGLLVASPIFASLAKSIDPFRLIGVGLSVWTLAAAGCGFSVDFWSLTICRMLIGVGEASFLSLAPPFIDENAPVDQRAACLGIFFVSTSVGNAVGYVYGGLVGASLGWRCAFFGE 199
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: A0A2R6X265_MARPO (MFS domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X265_MARPO) HSP 1 Score: 112 bits (279), Expect = 1.440e-26 Identity = 49/120 (40.83%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 1 TAAFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGLFSATGYWEISFFFE 360
++AFM+G ++ +P F +S+ L+ VGL W +A +G GLS+G++S+L R L+GV EASF+ LA +IDD +P + R+ WL F++ IP+G A+GYV G+ W ++F+ E
Sbjct: 85 SSAFMVGLLIASPIFAELSKTYNHMRLIGVGLSIWTLATLGCGLSMGFWSILFFRALVGVAEASFVSLAAPFIDDYAPPEKRTAWLSFFYACIPVGVALGYVYGGVVGGLWGWRVAFWLE 204
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: A0A6A7G8F1_9CRUS (Major facilitator superfamily protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8F1_9CRUS) HSP 1 Score: 111 bits (277), Expect = 2.930e-26 Identity = 51/124 (41.13%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 7 AFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGL------FSATGYWEISFFFE 360
A+++G+ ++ PFF H S + P +MC+GL W A+ +GL++ +Y+L R L GVGEASF+ LAP +ID +P + RS+WL +F+ IP+G A GYV+AG F A+ W F +
Sbjct: 88 AYLVGFALSGPFFAHFSHRFPPVRMMCLGLSVWSFASACSGLALEFYTLTLARALTGVGEASFLCLAPPFIDAFAPKERRSIWLAIFYCSIPVGVASGYVLAGQWLNSEPFGASWSWRAFFILQ 211
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: A0A2J6JMY9_LACSA (MFS domain-containing protein n=3 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6JMY9_LACSA) HSP 1 Score: 110 bits (274), Expect = 5.650e-26 Identity = 51/120 (42.50%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 1 TAAFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGLFSATGYWEISFFFE 360
++AF++G ++ +P F +++ + P L+ VGL W +A +G G SV ++S+ R L+GVGEASF+GLA +ID+ +PV R+ WLG+F +PIG AVG V GL W +FF E
Sbjct: 78 SSAFLVGLLIASPIFASLAQSINPFRLIGVGLSVWTLAVVGCGFSVDFWSITICRMLVGVGEASFIGLAAPFIDENAPVAQRTAWLGIFCMCLPIGIAVGDVYGGLVGDGLGWRYAFFGE 197
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Match: I0YKK9_COCSC (MFS general substrate transporter n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YKK9_COCSC) HSP 1 Score: 108 bits (270), Expect = 2.040e-25 Identity = 50/119 (42.02%), Postives = 75/119 (63.03%), Query Frame = 1
Query: 4 AAFMLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVRTLIGVGEASFMGLAPTYIDDVSPVKWRSVWLGVFFSMIPIGAAVGYVIAGLFSATGYWEISFFFE 360
AAF++G +V++P F S+ V L+ +GL W ++ G GLS+G++SLLT R +GVGEASF+ LA +IDD +P ++ WL F+ IP+G A+GY+ GL + W +F E
Sbjct: 47 AAFLVGLLVSSPIFAEASKHVNAFRLIALGLGVWTLSTAGCGLSIGFWSLLTCRMFVGVGEASFVALASPFIDDNAPPHAKTRWLATFYLCIPVGYALGYIFGGLVAGPLGWRAAFLLE 165 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115815.3276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115815.3276.1 >prot_M-pyrifera_M_contig115815.3276.1 ID=prot_M-pyrifera_M_contig115815.3276.1|Name=mRNA_M-pyrifera_M_contig115815.3276.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp MLGYMVTAPFFGHMSRKVRPAVLMCVGLCTWCVAAIGTGLSVGYYSLLTVback to top mRNA from alignment at M-pyrifera_M_contig115815:5..364- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115815.3276.1 ID=mRNA_M-pyrifera_M_contig115815.3276.1|Name=mRNA_M-pyrifera_M_contig115815.3276.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=360bp|location=Sequence derived from alignment at M-pyrifera_M_contig115815:5..364- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115815:5..364- >mRNA_M-pyrifera_M_contig115815.3276.1 ID=mRNA_M-pyrifera_M_contig115815.3276.1|Name=mRNA_M-pyrifera_M_contig115815.3276.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig115815:5..364- (Macrocystis pyrifera P11B4 male)back to top |