mRNA_M-pyrifera_M_contig115805.3274.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: E4PQU6_MARAH (Ion channel DMI1 n=23 Tax=Marinobacter TaxID=2742 RepID=E4PQU6_MARAH) HSP 1 Score: 365 bits (936), Expect = 4.900e-121 Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
A+ARPEVIVLGLLKPGSSGWDVQLL PSDSPIASADRVVIMARDYSETEPNPKKAPLP+LVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD
Sbjct: 331 AAARPEVIVLGLLKPGSSGWDVQLLAPSDSPIASADRVVIMARDYSETEPNPKKAPLPSLVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 517
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: A0A2T4DIE1_9GAMM (Ion channel DMI1 (Fragment) n=1 Tax=Marinobacter sp. B9-2 TaxID=2137198 RepID=A0A2T4DIE1_9GAMM) HSP 1 Score: 309 bits (791), Expect = 1.430e-103 Identity = 157/179 (87.71%), Postives = 164/179 (91.62%), Query Frame = 1
Query: 25 VLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
VLGLLK +GWDVQLL PSDS I ADRVVIMARDYSETEP+PKK LP L RGQAVRV+RP DQ+NHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIA+YV+N+ RL CRHIEADYMVE ELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD
Sbjct: 1 VLGLLKHHDAGWDVQLLAPSDSRIEPADRVVIMARDYSETEPDPKKGTLPELERGQAVRVDRPADQVNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIAQYVENADRLACRHIEADYMVEDELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 179
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: A0A1I6GWB2_9GAMM (Trk K+ transport system, NAD-binding component n=1 Tax=Marinobacter gudaonensis TaxID=375760 RepID=A0A1I6GWB2_9GAMM) HSP 1 Score: 305 bits (782), Expect = 6.100e-98 Identity = 152/187 (81.28%), Postives = 167/187 (89.30%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
A+ARPEVIVLGLLKP +GW+V LL PSD+PI DRVVIMARDYSETEP+ K+ PLP + RG AVRV P D+++HRVLV+GWNRRVPSL+AEFLSY HR FEVDLVSVVPKAEREQAIARYVD+ GR+ CRHIEADYMVEGELRRIGPA YDTVILLSSDRLASGEEADARAMVGYLQLEDILA+
Sbjct: 331 AAARPEVIVLGLLKPRETGWEVCLLAPSDTPIGPKDRVVIMARDYSETEPDAKRTPLPIIDRGPAVRVSPPADRIHHRVLVMGWNRRVPSLVAEFLSYSHRRFEVDLVSVVPKAEREQAIARYVDDDGRVVCRHIEADYMVEGELRRIGPANYDTVILLSSDRLASGEEADARAMVGYLQLEDILAE 517
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: A0A346S1B5_9GAMM (Ion channel DMI1 n=1 Tax=Marinobacter sp. Arc7-DN-1 TaxID=2304594 RepID=A0A346S1B5_9GAMM) HSP 1 Score: 295 bits (754), Expect = 9.250e-94 Identity = 147/187 (78.61%), Postives = 164/187 (87.70%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
ASARPEVIVLGLL+ G +GW+V LL PSD+ I + DRVV+MARDY ETEP+PKK +PA+ RG+A RV RP DQ NHRVLVLGWNRRVPSL+AEF SYGHR FE+DLVSVVPK EREQAIARYV+ GR+ C HIEADYMVEGELRR+ PAGYDT+ILLSSDRLASGEEADARAMVGYLQLEDILA+
Sbjct: 331 ASARPEVIVLGLLRRGVAGWEVCLLAPSDTRIDTEDRVVMMARDYVETEPDPKKPAMPAIARGEAARVARPPDQNNHRVLVLGWNRRVPSLVAEFESYGHRSFELDLVSVVPKGEREQAIARYVEGHGRVACGHIEADYMVEGELRRVQPAGYDTIILLSSDRLASGEEADARAMVGYLQLEDILAE 517
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: A0A2G1VF32_9GAMM (Ion channel DMI1 n=1 Tax=Marinobacter guineae TaxID=432303 RepID=A0A2G1VF32_9GAMM) HSP 1 Score: 276 bits (705), Expect = 1.840e-86 Identity = 141/187 (75.40%), Postives = 159/187 (85.03%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
A+ARPEVIVLGLLK G +GW+V LL PSD+ I ADRVV+MARDY+ETEP+PKK LP + RGQA RP + N+RVLVLGWNRRVPSL+AEF SYGHR FE+DLVSVV K EREQAIARYV++ ++ C HIEADYMVEGELRRI PA YDT+ILLSSDRLASGEEADARAMVGYLQLEDILA+
Sbjct: 331 AAARPEVIVLGLLKHGVAGWEVCLLAPSDTRIDMADRVVMMARDYAETEPDPKKPALPPMHRGQAPLAARPAAKKNYRVLVLGWNRRVPSLVAEFESYGHRSFELDLVSVVSKDEREQAIARYVEDRSQVACGHIEADYMVEGELRRIQPASYDTIILLSSDRLASGEEADARAMVGYLQLEDILAE 517
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: A0A2G1UIB1_9GAMM (Ion channel DMI1 n=1 Tax=Marinobacter profundi TaxID=2666256 RepID=A0A2G1UIB1_9GAMM) HSP 1 Score: 247 bits (631), Expect = 1.700e-75 Identity = 121/187 (64.71%), Postives = 149/187 (79.68%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
A+ RP+VIVLG+L+P +GWDV+LL+P+D+ + S+DR+++MARDY ETE + K PLP + RG A + VD HR LVLGWNRRVPSL+AE SY R FEVDLVSVVP +ER++ I +Y + + CRHIEADYMVEGELRRI PAGYD+++LLSSDRLASGEEADARAMVGYLQLEDIL +
Sbjct: 331 ATVRPDVIVLGMLRPKGTGWDVRLLMPADTRVESSDRIIMMARDYRETEADLKAKPLPPVRRGPARQAAVVVDTRQHRTLVLGWNRRVPSLVAELASYPQRRFEVDLVSVVPASERQREIQQYAGDQRHVICRHIEADYMVEGELRRINPAGYDSILLLSSDRLASGEEADARAMVGYLQLEDILGE 517
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: A0A072N0I4_9GAMM (Potassium voltage-gated channel subfamily KQT n=1 Tax=Marinobacter nitratireducens TaxID=1137280 RepID=A0A072N0I4_9GAMM) HSP 1 Score: 247 bits (630), Expect = 2.540e-75 Identity = 127/187 (67.91%), Postives = 148/187 (79.14%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
ASARP VIVLGLL+ +GWDV+L+ SD+ I S+DRV+++ARDYSET+ NPK APLP + R + + + +HRVL+LGWNRRVPSLIAEF SY FEVDLVSVVP EREQAIARYV R+ C HIEADYMVE +LRR+ PAGYD+VILLSSDRLAS EEADARAMVGYLQLEDIL +
Sbjct: 331 ASARPRVIVLGLLRQQGTGWDVRLVARSDTRIESSDRVIMLARDYSETDANPKLAPLPEVSRTEILHRPTHAIKNSHRVLILGWNRRVPSLIAEFASYRQLGFEVDLVSVVPVVEREQAIARYVGEGSRVRCHHIEADYMVEDDLRRVDPAGYDSVILLSSDRLASDEEADARAMVGYLQLEDILKE 517
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: A0A0P7X8Y4_9GAMM (K+ transport system NAD-binding component n=1 Tax=Marinobacter sp. HL-58 TaxID=1479237 RepID=A0A0P7X8Y4_9GAMM) HSP 1 Score: 245 bits (626), Expect = 1.260e-74 Identity = 121/187 (64.71%), Postives = 145/187 (77.54%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
AS R VIVLG+LKP GW+VQ+ SD PIA+ DRVV++ARDY+ETEP+ K APLP + RG+ + HRVLVLGWNRRVPSLI+EF SY FEVD+VSVVP ER+Q IARY+ + CRH+EADYMVEGELRR+GP YD+++LLSSDRLASGEEADARAMVGYLQLED+L++
Sbjct: 346 ASQRARVIVLGILKPQGRGWNVQMPASSDIPIAAEDRVVMLARDYAETEPDSKSAPLPMIARGEPAIRSATATERVHRVLVLGWNRRVPSLISEFSSYSQLRFEVDIVSVVPARERQQEIARYLGEQSAVICRHVEADYMVEGELRRVGPLSYDSIMLLSSDRLASGEEADARAMVGYLQLEDLLSE 532
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: UPI001C62B596 (ion channel DMI1 n=2 Tax=unclassified Marinobacter TaxID=83889 RepID=UPI001C62B596) HSP 1 Score: 243 bits (619), Expect = 1.020e-73 Identity = 126/187 (67.38%), Postives = 148/187 (79.14%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
A+ARP VIVLGLL+ + WDV+L+ PSD+ I + DRV++MARDYSET+PNPK LP + +A R + RVLVLGWNRRVPSL+AEF SYG+ F+VDLVSVVP EREQAI RYV R+ C H+EADYMVEGELRR+ P+GYDTVILLSSDRLASGEEADARAMVGYLQLE+ILA+
Sbjct: 331 AAARPGVIVLGLLRRRGTDWDVRLVAPSDTRIDAEDRVIMMARDYSETDPNPKLPALPVVSLKEARPSGRVETVRDQRVLVLGWNRRVPSLVAEFASYGNLDFQVDLVSVVPAREREQAILRYVGEFPRVRCHHLEADYMVEGELRRLMPSGYDTVILLSSDRLASGEEADARAMVGYLQLEEILAE 517
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Match: UPI00124771BA (potassium channel family protein n=1 Tax=Marinobacter halotolerans TaxID=1569211 RepID=UPI00124771BA) HSP 1 Score: 238 bits (608), Expect = 4.200e-72 Identity = 120/187 (64.17%), Postives = 142/187 (75.94%), Query Frame = 1
Query: 1 ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPNPKKAPLPALVRGQAVRVERPVDQMNHRVLVLGWNRRVPSLIAEFLSYGHRHFEVDLVSVVPKAEREQAIARYVDNSGRLTCRHIEADYMVEGELRRIGPAGYDTVILLSSDRLASGEEADARAMVGYLQLEDILAD 561
AS RP+VIVLG+LK GW+VQ+ SD+ I + DRVVI+ARDYSETE +PK L + R Q + HRVLVLGWNRRVPSLI EF SY R FEVD+VSVVP ER+Q I RY+ GR+ CRH+EADYMVEGELRR+GP YD+++LLSSDRLASGEEADARAMVGYLQLED+L++
Sbjct: 331 ASQRPKVIVLGILKQAGKGWNVQMPAASDTRIEAGDRVVILARDYSETEADPKAPALNLISRRQPASQAARTSEKVHRVLVLGWNRRVPSLIDEFSSYSQRRFEVDVVSVVPARERQQEIDRYLTEPGRVVCRHVEADYMVEGELRRVGPLNYDSILLLSSDRLASGEEADARAMVGYLQLEDLLSE 517 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115805.3274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115805.3274.1 >prot_M-pyrifera_M_contig115805.3274.1 ID=prot_M-pyrifera_M_contig115805.3274.1|Name=mRNA_M-pyrifera_M_contig115805.3274.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp ASARPEVIVLGLLKPGSSGWDVQLLVPSDSPIASADRVVIMARDYSETEPback to top mRNA from alignment at M-pyrifera_M_contig115805:2..562+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115805.3274.1 ID=mRNA_M-pyrifera_M_contig115805.3274.1|Name=mRNA_M-pyrifera_M_contig115805.3274.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig115805:2..562+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115805:2..562+ >mRNA_M-pyrifera_M_contig115805.3274.1 ID=mRNA_M-pyrifera_M_contig115805.3274.1|Name=mRNA_M-pyrifera_M_contig115805.3274.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig115805:2..562+ (Macrocystis pyrifera P11B4 male)back to top |