prot_M-pyrifera_M_contig115787.3266.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115787.3266.1
Unique Nameprot_M-pyrifera_M_contig115787.3266.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
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BLAST of mRNA_M-pyrifera_M_contig115787.3266.1 vs. uniprot
Match: A0A6H5JF22_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF22_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 6.890e-20
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0 
Query:    1 MDAYCLVRFNYLCLRICTFASFWGMLVLTPVYAFTGSDG-DGIYYLTLANVSAGS 54
            MDAYCL+RFNYLCLRIC F+SFWGMLVLTPVYA  GSD  + IYYLTLANV +GS
Sbjct:  120 MDAYCLLRFNYLCLRICLFSSFWGMLVLTPVYALDGSDAVNTIYYLTLANVPSGS 174
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BLAST of mRNA_M-pyrifera_M_contig115787.3266.1 vs. uniprot
Match: D8LGF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF9_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 3.560e-17
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 0 
Query:    1 MDAYCLVRFNYLCLRICTFASFWGMLVLTPVYAFTGSDG-DGIYYLTLANVSAGS 54
            MDAYCL+RF YLCLRIC F+SFWGMLVLTPVY   GS+  + IYY+TLANV +GS
Sbjct:  118 MDAYCLLRFIYLCLRICLFSSFWGMLVLTPVYVLDGSEAVNTIYYVTLANVPSGS 172
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BLAST of mRNA_M-pyrifera_M_contig115787.3266.1 vs. uniprot
Match: A0A835ZAA7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.460e-10
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0 
Query:    2 DAYCLVRFNYLCLRICTFASFWGMLVLTPVYAFTGSDGDGIYYLTLANVSAG 53
            DAY L+ F ++CL IC  +SFWGML+L P+YA  G+  +G Y LT+ NV  G
Sbjct:   82 DAYLLLSFEWMCLMICVVSSFWGMLLLAPLYASDGNQAEGFYQLTMINVPNG 133
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BLAST of mRNA_M-pyrifera_M_contig115787.3266.1 vs. uniprot
Match: A0A7S4D9P4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9P4_HETAK)

HSP 1 Score: 58.5 bits (140), Expect = 1.200e-8
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:    1 MDAYCLVRFNYLCLRICTFASFWGMLVLTPVYAFTGSDGDGIYYLTLANVSAGS 54
            MDAY  +R+  LC RIC F+SFWG+LVL P+YA      D     +L NV+ GS
Sbjct:   69 MDAYVFIRYLTLCFRICAFSSFWGLLVLLPIYASADIRNDNFSRFSLVNVTQGS 122
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115787.3266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JF22_9PHAE6.890e-2080.00ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LGF9_ECTSI3.560e-1772.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAA7_9STRA5.460e-1051.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D9P4_HETAK1.200e-850.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032880Calcium permeable stress-gated cation channel 1, N-terminal transmembrane domainPFAMPF13967RSN1_TMcoord: 1..54
e-value: 8.2E-9
score: 35.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115787contigM-pyrifera_M_contig115787:188..349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115787.3266.1mRNA_M-pyrifera_M_contig115787.3266.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115787 185..349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115787.3266.1 ID=prot_M-pyrifera_M_contig115787.3266.1|Name=mRNA_M-pyrifera_M_contig115787.3266.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
MDAYCLVRFNYLCLRICTFASFWGMLVLTPVYAFTGSDGDGIYYLTLANV
SAGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032880Csc1_N