mRNA_M-pyrifera_M_contig11568.3250.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11568.3250.1
Unique NamemRNA_M-pyrifera_M_contig11568.3250.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: A0A6H5L328_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L328_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 4.920e-112
Identity = 219/330 (66.36%), Postives = 249/330 (75.45%), Query Frame = 1 
Query:    4 VSLGRMQKFFEMEELHPADREWTNRDGNGKGAGSLSVSGKFVWTLAADTDDDGTPNDKEGKEGGGKDEXXXXXXXXXXXXXXXXXXXGSGI--EGGT-RP--LTPPPSI----------LRAP---------KVGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCFTDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLLMDEESGLARLMETFAEDGSDND 921
            VS+GRMQ FFE+EELHP+DREWTNR G G GA  +S++GKFVWT + +                    XXXXXXXXXXXXXX     G+ +  EGG  RP  L    S+          LR P         +VGSGKSSLVSA LGEMTKVEG+VS+DGSVAYVAQTAWIINA+LK+N+LMGR  DE RYQKVL+VC+M QDLSQLPAGD TEIG+KGINLSGGQKQRVSIARAAYANADVYI+DDPLSAVDAHVARHLFD C   FLKGKT++LCANQLQFLPQTDLVLVL GGR+VE+G YGDL++ E  GLA+LME FAED SD++
Sbjct:  394 VSVGRMQAFFELEELHPSDREWTNRQGQGSGA--VSITGKFVWTPSDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGTKGAAVADEGGEERPDDLKKENSVAEKWELNVKGLRIPSHKLTAVVGQVGSGKSSLVSALLGEMTKVEGRVSIDGSVAYVAQTAWIINATLKENVLMGRPFDEARYQKVLDVCDMKQDLSQLPAGDETEIGDKGINLSGGQKQRVSIARAAYANADVYILDDPLSAVDAHVARHLFDECLAGFLKGKTVVLCANQLQFLPQTDLVLVLDGGRIVEEGSYGDLMVAEGGGLAKLMEMFAEDESDDE 721
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: D8LMY6_ECTSI (ABC transporter ABCC.12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMY6_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 7.670e-110
Identity = 212/316 (67.09%), Postives = 240/316 (75.95%), Query Frame = 1 
Query:    4 VSLGRMQKFFEMEELHPADREWTNRDGNGKGAGSLSVSGKFVWTLAADTDDDGTPNDKEGKEGGGKDEXXXXXXXXXXXXXXXXXXXGSGIEGGTRPLTPPP----------SILRAPKVGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCFTDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLLMDEESGLARLMETFAEDGSDND 921
            VS+GRMQ FFE+EELHP+DREWTNR+G G GA  +S++GKFVWT + +                    XXXXXXXXXXXXXXXXXXX                         +I+R  +VGSGKSSLVSA LGEMTKVEG+VS+DGSVAYVAQTAWIINA+LK+NILMGR  DE  YQKVL+VC+M QDLSQLPAGD TEIG+KGINLSGGQKQRVSIARAAYANADVYI+DDPLSAVDAHV RHLFD C   FLKGKT+ILCANQLQFLPQTDLVLV+  GR+VE+G Y DL+  E  GLA+LME FAED SD++
Sbjct:  321 VSVGRMQAFFELEELHPSDREWTNREGPGSGA--VSIAGKFVWTPSDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARFNNNINIVR--QVGSGKSSLVSALLGEMTKVEGRVSIDGSVAYVAQTAWIINATLKENILMGRPFDEALYQKVLDVCDMKQDLSQLPAGDETEIGDKGINLSGGQKQRVSIARAAYANADVYILDDPLSAVDAHVGRHLFDECLAGFLKGKTVILCANQLQFLPQTDLVLVVDEGRIVEEGSYADLMAAEGGGLAKLMEMFAEDESDDE 632
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: A0A835YM87_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM87_9STRA)

HSP 1 Score: 296 bits (759), Expect = 4.250e-88
Identity = 176/328 (53.66%), Postives = 215/328 (65.55%), Query Frame = 1 
Query:    4 VSLGRMQKFFEMEELHPADREWTNRDGNGKGAGSLSVS-GKFVWTLAADTDD-----------DGTPNDKEGKEGGGKDEXXXXXXXXXXXXXXXXXXXGSGIEG---------GTRPLTPPPSILRAP-KVGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCFTDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLLMDEESGLARLMETFAEDGSDND 921
            +SLGR+Q+F E+EEL    R WT+R G GKG G++SVS G F WT  ADTD+           D T    EGK+      XXXXXXX              G  G            P+  P  ++    +VGSGKSSLV+A LGEMT+V G+V+VDGSVAYVAQTAWI+NA+L++N+LMG   D  RY +V+EVC + QD + LPAGD TEIGEKGINLSGGQKQRVS+ARAAYA+ADVY+ DDPLSAVDAHVARH+F+RC    L+GKT +LCANQLQFL   D V+V+ GG + E G Y +L+      LA LMETF     D+D
Sbjct:  330 ISLGRLQRFIELEELDEEGRAWTHRQGTGKGRGTISVSDGVFSWT--ADTDEAADKKRASGMPDATAKPAEGKKXXXXXXXXXXXXXGKKKGAPGAAAVTDGKTGEGEMEQEVVAVAPVVGPGELVAVVGQVGSGKSSLVAAVLGEMTRVRGRVTVDGSVAYVAQTAWIVNATLRENVLMGLPFDAARYDRVVEVCALQQDFAMLPAGDRTEIGEKGINLSGGQKQRVSLARAAYADADVYVFDDPLSAVDAHVARHIFERCIKGELRGKTRLLCANQLQFLADCDRVMVVRGGGIAEAGPYAELVKVPGGELAALMETFGAGAGDSD 655
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: A0A8J4PUR9_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PUR9_9MYCE)

HSP 1 Score: 235 bits (599), Expect = 2.490e-66
Identity = 110/175 (62.86%), Postives = 138/175 (78.86%), Query Frame = 1 
Query:  331 VGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCFTDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLL 855
            VGSGKSS   + LGEM    G + V G++AYV+Q AWIINA+L++NIL G++ DEE+YQKVL+VC + +D+   PAGD+ EIGE+G+NLSGGQKQRVSIARA Y+++D+YI+DDPLSAVDAHV +HLF +CF   LKGKTIIL ANQL FLP  D  LVL GG +VEQG Y  ++
Sbjct:  473 VGSGKSSFCQSILGEMDLKSGDLEVKGNIAYVSQQAWIINATLRENILFGKEYDEEKYQKVLDVCALKRDIELFPAGDMVEIGERGVNLSGGQKQRVSIARAVYSDSDIYILDDPLSAVDAHVGKHLFHKCFNGILKGKTIILAANQLNFLPYCDKALVLKGGEIVEQGNYKQII 647
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: A0A0S7GC69_9TELE (MRP3 (Fragment) n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GC69_9TELE)

HSP 1 Score: 216 bits (551), Expect = 1.510e-65
Identity = 110/192 (57.29%), Postives = 143/192 (74.48%), Query Frame = 1 
Query:  331 VGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCF--TDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLLMDEESGLARLMETFA 900
            VG GKSSL+SA LG+M KVEG+VSV GSVAYV Q AWI NA+L+DNIL G+  +E +Y++VL+ C +  DL  LP GD+TEIGEKGINLSGGQ+QRVS+ARA Y++A+VY++DDPLSAVDAHV++H+FD        LKGKT IL  + + FLPQ D ++V+  GRV E G Y +LL ++    A  +  +A
Sbjct:   46 VGCGKSSLISALLGDMEKVEGEVSVRGSVAYVPQQAWIQNATLRDNILFGKSFNECKYRRVLDACALTPDLEVLPGGDMTEIGEKGINLSGGQRQRVSLARALYSDAEVYLLDDPLSAVDAHVSKHIFDNLIGPEGVLKGKTRILVTHGISFLPQVDNIVVMVEGRVSEMGSYQELL-NQNGAFAEFLRNYA 236
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: A0A2U3Z6P3_LEPWE (canalicular multispecific organic anion transporter 1-like n=1 Tax=Leptonychotes weddellii TaxID=9713 RepID=A0A2U3Z6P3_LEPWE)

HSP 1 Score: 221 bits (562), Expect = 2.730e-65
Identity = 106/191 (55.50%), Postives = 144/191 (75.39%), Query Frame = 1 
Query:  331 VGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCF--TDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLLMDEESGLARLMETF 897
            VGSGKSSL+SA LGEM  V G +++ G++AYV Q +WI N +++DNIL G +LDE+RYQ++LE C + QDL  LP GDL EIGEKGINLSGGQKQR+S+ARA Y N+D+Y++DDPLSAVDAHV +H+F++       LKGKT +L  + + FLPQ D ++VL  G ++E+G Y  LL  + S  A++++TF
Sbjct:  251 VGSGKSSLMSAMLGEMENVHGHITIKGTIAYVPQQSWIQNGTIRDNILFGSELDEKRYQQILEACALLQDLEVLPGGDLAEIGEKGINLSGGQKQRISLARAIYQNSDIYVLDDPLSAVDAHVGKHIFNKILGPKGLLKGKTRLLVTHSIHFLPQVDEIVVLGNGTILEKGSYSTLLAKKGS-FAKILKTF 440
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: ABCCC_DICDI (ABC transporter C family member 12 n=2 Tax=Dictyostelium discoideum TaxID=44689 RepID=ABCCC_DICDI)

HSP 1 Score: 231 bits (590), Expect = 3.860e-65
Identity = 108/175 (61.71%), Postives = 139/175 (79.43%), Query Frame = 1 
Query:  331 VGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCFTDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLL 855
            VGSGKS+LV A LGE+  ++G++ + GS+AYV Q AWIINA+LK+NI+ G++LDEERYQKVLEVC + +D+   P GD  EIGE+GINLSGGQKQRVSIARA Y++ADVYI+DDPLSAVD+HV +HLF +CF   L  KT+IL ANQ+ +LP  D  +VL  G +VE+G Y +L+
Sbjct:  466 VGSGKSTLVQAMLGELETIDGEIGIKGSIAYVPQQAWIINATLKENIIFGKELDEERYQKVLEVCALKRDIELFPQGDSVEIGERGINLSGGQKQRVSIARAVYSDADVYILDDPLSAVDSHVGKHLFHKCFKGILSSKTVILVANQINYLPFADNTVVLKSGEIVERGTYYELI 640
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: ABCCA_DICDI (ABC transporter C family member 10 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ABCCA_DICDI)

HSP 1 Score: 231 bits (590), Expect = 3.890e-65
Identity = 109/175 (62.29%), Postives = 139/175 (79.43%), Query Frame = 1 
Query:  331 VGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCFTDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLL 855
            VGSGKS+LV A LGE+  ++G++ + GS+AYV Q AWIINA+LK+NI+ G++LDEERYQKVLEVC + +D+   P GD  EIGE+GINLSGGQKQRVSIARA Y++ADVYI+DDPLSAVD+HV +HLF +CF   L  KT+IL ANQL +LP  D  +VL  G +VE+G Y +L+
Sbjct:  461 VGSGKSTLVQAMLGELEIIDGEIGIKGSIAYVPQQAWIINATLKENIIFGKELDEERYQKVLEVCALKRDIELFPQGDSVEIGERGINLSGGQKQRVSIARAVYSDADVYILDDPLSAVDSHVGKHLFHKCFKGILSSKTVILVANQLNYLPFADNTVVLKSGEIVERGTYYELI 635
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: F0ZMG8_DICPU (Uncharacterized protein ABCC3 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZMG8_DICPU)

HSP 1 Score: 230 bits (586), Expect = 1.380e-64
Identity = 117/197 (59.39%), Postives = 144/197 (73.10%), Query Frame = 1 
Query:  331 VGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCFTDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLLMDEESGLARLMETFAEDGSDND 921
            VGSGKSSL+ A LGEM  VEG++S+ GS+AYVAQ AWIINASLKDNIL G+   E +Y+KVLEVC + +D+   P GDL EIGE+G+NLSGGQKQRVSIARA YA+ADVYI+DDPLSAVDAHV +HLF +CF   L+ KT+IL ANQL +LP      VL  G+V E+G Y  L+  ++     L E   ++ S  D
Sbjct:  474 VGSGKSSLLQALLGEMDMVEGELSIKGSIAYVAQQAWIINASLKDNILFGKPYIESKYKKVLEVCALERDIELFPQGDLVEIGERGVNLSGGQKQRVSIARAVYADADVYILDDPLSAVDAHVGKHLFHKCFKGVLRNKTVILAANQLNYLPFASYCYVLKEGQVSEKGTYQQLVNSQKEFSVLLQEYGVDETSITD 670
[Close]
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Match: A0A060Y9V9_ONCMY (ABC transporter domain-containing protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060Y9V9_ONCMY)

HSP 1 Score: 214 bits (544), Expect = 2.100e-64
Identity = 108/177 (61.02%), Postives = 133/177 (75.14%), Query Frame = 1 
Query:  331 VGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDNILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQRVSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCF--TDFLKGKTIILCANQLQFLPQTDLVLVLHGGRVVEQGKYGDLL 855
            VG GKSSLVSA LGEM K+EG +S+ GSVAYV Q AWI NA+L+DNIL G+  +E++Y+  LE C +  DL  LP GDLTEIGEKGINLSGGQ+QRVS+ARA Y  ADVY++DDPLSAVD+HVA+H+FD        L+GKT IL  + + FLPQ D ++V+  GRV E G Y +LL
Sbjct:   56 VGCGKSSLVSALLGEMEKLEGHISIRGSVAYVPQQAWIQNATLRDNILFGKAYNEQKYRSCLEACALTPDLEVLPGGDLTEIGEKGINLSGGQRQRVSLARALYNEADVYLLDDPLSAVDSHVAKHIFDHVIGPEGVLQGKTRILVTHGISFLPQVDNIMVMVEGRVSEMGSYQELL 232
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11568.3250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L328_9PHAE4.920e-11266.36ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LMY6_ECTSI7.670e-11067.09ABC transporter ABCC.12 n=1 Tax=Ectocarpus silicul... [more]
A0A835YM87_9STRA4.250e-8853.66P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8J4PUR9_9MYCE2.490e-6662.86Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A0S7GC69_9TELE1.510e-6557.29MRP3 (Fragment) n=2 Tax=Poeciliopsis prolifica Tax... [more]
A0A2U3Z6P3_LEPWE2.730e-6555.50canalicular multispecific organic anion transporte... [more]
ABCCC_DICDI3.860e-6561.71ABC transporter C family member 12 n=2 Tax=Dictyos... [more]
ABCCA_DICDI3.890e-6562.29ABC transporter C family member 10 n=1 Tax=Dictyos... [more]
F0ZMG8_DICPU1.380e-6459.39Uncharacterized protein ABCC3 n=1 Tax=Dictyosteliu... [more]
A0A060Y9V9_ONCMY2.100e-6461.02ABC transporter domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11568contigM-pyrifera_M_contig11568:3788..9645 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score343.6
Seed ortholog evalue9.4e-92
Seed eggNOG ortholog2880.D8LMY6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1132@1,KOG0054@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size921
Cds size903
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11568.3250.1prot_M-pyrifera_M_contig11568.3250.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11568 3788..9627 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815672.8591995-CDS-M-pyrifera_M_contig11568:3787..38771622815672.8591995-CDS-M-pyrifera_M_contig11568:3787..3877Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 3788..3877 -
1692277515.1525984-CDS-M-pyrifera_M_contig11568:3787..38771692277515.1525984-CDS-M-pyrifera_M_contig11568:3787..3877Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 3788..3877 -
1622815672.8756168-CDS-M-pyrifera_M_contig11568:4384..45111622815672.8756168-CDS-M-pyrifera_M_contig11568:4384..4511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 4385..4511 -
1692277515.1618943-CDS-M-pyrifera_M_contig11568:4384..45111692277515.1618943-CDS-M-pyrifera_M_contig11568:4384..4511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 4385..4511 -
1622815672.8885896-CDS-M-pyrifera_M_contig11568:5546..57131622815672.8885896-CDS-M-pyrifera_M_contig11568:5546..5713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 5547..5713 -
1692277515.1713066-CDS-M-pyrifera_M_contig11568:5546..57131692277515.1713066-CDS-M-pyrifera_M_contig11568:5546..5713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 5547..5713 -
1622815672.9023554-CDS-M-pyrifera_M_contig11568:7072..73231622815672.9023554-CDS-M-pyrifera_M_contig11568:7072..7323Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 7073..7323 -
1692277515.1787362-CDS-M-pyrifera_M_contig11568:7072..73231692277515.1787362-CDS-M-pyrifera_M_contig11568:7072..7323Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 7073..7323 -
1622815672.9154398-CDS-M-pyrifera_M_contig11568:9359..96271622815672.9154398-CDS-M-pyrifera_M_contig11568:9359..9627Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 9360..9627 -
1692277515.1861796-CDS-M-pyrifera_M_contig11568:9359..96271692277515.1861796-CDS-M-pyrifera_M_contig11568:9359..9627Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11568 9360..9627 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815672.930576-UTR-M-pyrifera_M_contig11568:9627..96451622815672.930576-UTR-M-pyrifera_M_contig11568:9627..9645Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11568 9628..9645 -
1692277515.1935115-UTR-M-pyrifera_M_contig11568:9627..96451692277515.1935115-UTR-M-pyrifera_M_contig11568:9627..9645Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11568 9628..9645 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11568.3250.1

>prot_M-pyrifera_M_contig11568.3250.1 ID=prot_M-pyrifera_M_contig11568.3250.1|Name=mRNA_M-pyrifera_M_contig11568.3250.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=301bp
MQKFFEMEELHPADREWTNRDGNGKGAGSLSVSGKFVWTLAADTDDDGTP
NDKEGKEGGGKDEGNDKGKSKSNGNHNGRDNGGSGIEGGTRPLTPPPSIL
RAPKVGSGKSSLVSAFLGEMTKVEGKVSVDGSVAYVAQTAWIINASLKDN
ILMGRQLDEERYQKVLEVCEMGQDLSQLPAGDLTEIGEKGINLSGGQKQR
VSIARAAYANADVYIMDDPLSAVDAHVARHLFDRCFTDFLKGKTIILCAN
QLQFLPQTDLVLVLHGGRVVEQGKYGDLLMDEESGLARLMETFAEDGSDN
D
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mRNA from alignment at M-pyrifera_M_contig11568:3788..9645-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11568.3250.1 ID=mRNA_M-pyrifera_M_contig11568.3250.1|Name=mRNA_M-pyrifera_M_contig11568.3250.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5858bp|location=Sequence derived from alignment at M-pyrifera_M_contig11568:3788..9645- (Macrocystis pyrifera P11B4 male)
CAGGTCTCCCTCGGACGGATGCAAAAGTTCTTCGAGATGGAGGAGCTTCA
TCCCGCCGATCGCGAGTGGACGAACCGCGACGGTAACGGCAAGGGCGCCG
GCTCTCTCTCCGTGTCCGGGAAGTTCGTCTGGACCCTGGCTGCCGACACC
GACGACGACGGCACCCCCAACGACAAGGAGGGCAAGGAAGGGGGCGGCAA
GGACGAGGGAAATGACAAGGGCAAGAGCAAGAGCAATGGCAATCACAATG
GCAGGGACAATGGCGGCAGCGGCATCGAAGGCGGAAGTGGCACAAAAGGC
AGCAGCGGCGGCTACCAATTGGCCGCCAAGTCTAAGGCGAAGGCGTCTGC
GGTGGGCCCGCCGAGGGCGTCGGTCGACAAGGCAGAGGAGGCGTCGGCAC
CGACAGGTGAGGATGGGAGGTCTGGGACGTTCGCACGCGTGTACTCGAAC
GGCGCCCGTGAAAAAAAGGAAAGGGGGAGGAGGGAGAGAGAGGGGAATAA
CCCTGCCACGCCTCGTTTTTATTTTTTCCCACTATTTTCTGAGGGATAAC
GAAGCCCTGCCACGAACTGTCCACCATCTCCGCGATTCCATTTACAACAG
TTCTAGGGCATGGTTTGCGTCGGGTTGCGCGTACAACGTCTCTCAAAAGA
ATATTTTGGGTAAAGTATAGCGCTGCTCATCTTATGAAGCTGAGAAAATC
GTGGTACTCCCTTTTTGCTCAAGCGCGGCGGGGTTGTATCATATTGACGA
GAGGTGGGGGATGGAACGGGAAGAAAGGGATTGAACGAATTGGGGAAGAG
CACTTGGAAGGAAAAGGAAGGACGTAAGAAAAAAAGGAAGAGAGGAAGGA
AGGAAGGAAGAAAGTGAACAGGGAAAGACGAGGCAGGCAGGAAGATTCTA
GCGCTTTCGTCATAGTTCCTCCGCCCTCCCCGAGTGCGCGCGCTTTGTTA
TCATCGCCCTAGGTAGTGGACTTGTCGGAAGCAGTTGTCAGGCAGGCGTC
AAGGAAGGAGGGGGTAGTGATAGGGAAGCGGGGGAGGAGCGGGGGGCGAC
AACGAAGAAAACAAGGAATCGAGGGCGGTCGGGGGGGGGTGGGGGGTGGC
GGGTGGTTGGTCGAATGCTGGCATGAAGGGAAACTAAAAGCCGCCGTATT
GATAGTACCCCAATTTATTTTTGTTGGCATGAGGTGACCTTCTGGGGGGG
TGTCGAGGGTCCCGACGATGCGGCGGTTGCGGCCGCGGCGGTGTGCGGCA
GGATTGCTGCTATTGTTTTTTATTGTTGGTCTCGCTTTTTCTGGGTTATC
TCGTTTGAGCTGGTGGCCTTGTTGTCGAAGACCCGGTTGTGGCTGTCGTT
TCAGGGAGATCGAGTACCCCCCCCCTCCGCCCCCGGCCTCCATCCGCCTA
AAAGTGAAAGGTGTCTCTATTAAGAGTAGGGACGGTGCTCCGTCTCAAAA
GGGATGCGTGGTCAATGGCCAAATGACTGAAACAAAGAACAAAAAAGTAC
ACCCCCCTCCCCCCCTCCTCCTCTTTAGTTTTTTCTCCTCTGGCGTCCTC
CCCGTGCCGTGGGCTGCGACACCTTCCGGCAACATCCAAAACCAACCAGA
CGACCTCGTAAAAATCGACCTCATGCCGGCTCCGGCAGCCGAGAATGGAG
GCAAGGAGGTTTCCAAGGCGGTGCAGGTGTGGGACCTGGTCCTCCATGAT
GTGCAGATACCGGCCGGAAAGCTCGTCGCGGTCGTTGGACAGGTGTGCGT
GTGTTTTATGTGTGTCTCCGAGATTTGTGTTGATGAACATTTTCCATGAT
TTGTGCAATCAAATTCTCACCCCAAACCTATCCCCCCCGTTGCTCTCCTC
CGTTTTGTGCGTAGTTGTCGTGGAATATGTGTTTGTGTTTGCGCATGATG
TGTGTCCATGGTTCGTGCAATCAATTACCCCACACCAAACGTCTCCCCAA
TCCCCTGCTCTCCTGATGATCAGTGACGATTGTGCGTTCGTTCTGGTTTG
TTGTTTGGTTACCAGTAGTAGAGCGCTTCGTTTTCTCCGAAATTATGGTG
ATGAAGGCACACAGTTATGTTTGTGTATGCACTTGTGTGTGAGTTGAGTG
TGTGGGGGTGTGCTGTGTGTGCATTTAAGGGGGGGTGTCTGTCTGTCTGT
CAGTTTTGTCTGTTCGTTTGGCTACGTCCGTGTCTTCTTCCATGTGTCAT
ACATGTGTGAGTCTTGTACGGGTATTTGTGTGTACATCTGTGTATCGTGC
ACATATGAGCCTCACTCGGTGTGTGTTTGCGTAGTTTTTTTCTGTAGATG
ACTGCGTGTACAGGTGAAGTAGCGCGGCCACTGACTCCTCCCCCCTCCAT
CCTTCGGGCTCCAAAGGTGGGTAGTGGAAAGAGCAGCCTGGTGTCGGCGT
TCCTCGGAGAGATGACGAAGGTGGAAGGCAAGGTGTCCGTCGACGGGAGC
GTGGCGTACGTGGCGCAGACGGCGTGGATCATCAACGCGTCGCTCAAGGA
CAACATTCTGATGGGCAGACAACTCGACGAGGAACGCTATCAGAAAGTTC
TGGAAGTGTGCGAAATGGGGCAGGTGCGTGTTTGTGTTGCTGGGCTTGCA
TGGTTGTTGTTGGTGATGATGATAAATGCTGTTGCTGTTGTCTGCGCGTA
TCTGTGTCTGTGGTTTCGGATGTGTTAACAGGTCATTTATAAGCAATTTT
GGCAATATTCGATAGCAATTTCCCAGCTCGGGTGGTTCTTGTCATTCCAT
TACCTCTCTCTTGGGGTGCATGTATTTTCTTCATTGTTTTTGGTCGTCCG
TGCTGAGGTCAACGCGTGCGCGGAGCGTGCACGGTGGCGTTTTCAATAAA
TTTATTGTGGACGTACTCACCACTGCTACGTGTACTTCCGGCCATTTGAA
TCGACTGAAATTCTGATTACGCCCGGCCAGTCGAGAACGTACGAGCAAAA
AACGAGCAAATCTCGCCCTTTACGGTTTACCGCTGCAGCACCGACACCGA
CAGCAACGAACGCGACAACATTCTCCAGGAAGGGATAAGGGACAAACCCC
TCTCTATCCCCCTTCCCCCCCCCCTCCACCCCCCCCCCATCACTTCAACC
ACAGCAGTGCGGTCGACATCGTTGTCTTGTCTTCCTGGATGTTGTCAAAA
AGGCTAATCGTTGTACGCAAGCTTTTGTTCTGTCTTTGCTTTTATTCGCT
GTTATGTACCAGGTACCTTGCTCCTTTTTATTTTTCCTTTTCGTTTCCGG
TACGTTTGTCACCGCATGACTTCCCCCAGACGTGTGTAACGATAGAGTTA
GCACTTTTTGTGCTAACACAAAATCTGAATGACGGGACTCCTTAGCCCGA
AATCGTCGGAACACTTTTTTTTTCGATATTAATATTTTGCACACCTGTGA
GTAGGCCATGGGATTGGTCATCGGGTTGCACTTGCAAGTTTTTCAAGAAT
GGCTTACTATTAGTACAGAGCTCCTCAATCAAGGAAAAGTCAGAAAACAA
TTGGCGCACCTCTACCTTAGAATGTGTTCCCCTCTCCTTTTCATCTGCGG
TGTGCACAAGCATACTCTTTGTCTCGCGTTTCTCTCCCCATCATAAGAAG
AACAATCAGTACGGGATGACCCTGGGGGTATTGCTGGCTGAGGTTTCACA
ATTGCGAAGACGACGCACAGCACAACGCACAGCACATGCTGCCCAATACT
GCTGCACGTTGTGTGATGTCTGTTTCGAGCTAAAACATATTTTGCCGCAC
GTATACGCCTTTTTGACGCCCTTTTGAGGCCCAAACATGCGTACTTTCGT
GCAAACCCTGAGGTTATGTTGTCATCAGCGGTCTATGGTCATGCGACTAC
GGCCATGCATGAACATGAGTACACCCCCCCTTCCCCCCCTTCCCGCACTG
CGCTGGTGACTGTCTTGACTCGACGACAATAGGATTTGAGCCAGCTGCCC
GCCGGAGATTTGACCGAGATCGGGGAAAAGGGCATCAACCTTTCCGGAGG
ACAGAAACAGCGGGTTTCGATAGCCAGGGCGGCGTACGCGAACGCAGATG
TTTATATAATGGATGACCCTCTCTCGGCCGTCGATGCACACGTGGCGAGG
TGCGAGTGCAACTATTGTAGTAGTGGTAGTAGTAGTAGTAGTATTAGTAC
CAAGTAGTAGTCGTAGTATTAGTAGTAGTAGCAGTAGTGGTGGTGTAGTA
GTAGTAGTAGTAGTAATATTATTAGTAGTAGCAGTAGTAGTAGTAGTAGT
AGTAGTAGCAGTAGTAGTGGTGGTAGTAGTAGTGTATAAGACGTACCTGG
TAGTGTACAAATAGTGTATAAGTAGTGTATACGTAGTGCATACGTTTCCA
CCCCCTTCTCACTGCTCTTCATCGAAAAGTTTAGCGACAGGCGAGGGAGG
CCCTGTCGAGGTCGTAGGGAAAGGCACAGTGTGGCGTTAATGGCACCGGT
CGCGGTGGTAGTAGTAATATAGCATAGTAGTACAGTTGCGGTATGTATTA
CAAGCAGAACATTACTTTTCGTGCATTTTCTCATCAAGGGAGAGGAGAAC
AGGGAATCTACCTATCTCAAGTCCCAGGGCGTGTCTTAACTGCCCCCCAG
AGAACATTGGAACGAAGCGAATGTGATATCATTTTTCACATGAATTGGTA
CTGATTGGTTATGGAAAACGAATAGATTAGTGCAGCCCGAGAAAAACAAT
ATGTCCTGGAAGAGGAAGAACAAGTGCTGTACCCTTTCTTCTTCTCTGGG
AGGACCGGACGGCCCAAACGAACGGGAACAAATAACAATCGTTTGATGTA
GATGGACACCGCCGAAGATGGACGTGGACACCACTTTGCGCACAGCAGCG
TGTTAGTGTTGTGGCATGTGCAACACATACCGTTCGTACTGATTCGGCTA
GCGAGGCCCAGGATTCTGCATGAAACCAAACACGTTTTTGTACACAGGAA
CGGAACGAATGACCACGAGCAGCCTCGTTCCGTTCCGCTCGTTCGCATGC
TCTTCGGAGGGGGTTAAGACGCGCCCTCACCCCCACCTCCCCCCCCAACT
TACGCCCCGCTTATTGTGGCCACAAATACAAACACGCCGCTGTGGTGTGA
AACCTGCCCCCTTCCCCACCCCTTCTGCCTCAAGACACCTGTTCGATCGG
TGCTTCACGGATTTCCTGAAGGGCAAGACCATCATCCTGTGCGCCAACCA
GCTCCAGTTCTTGCCCCAGACCGACCTGGTGCTGGTGCTTCACGGGGGAC
GTGTCGTCGAGGTTCGTGTTTGCGGATTGCGAGTGTTGTGCGTGTGTGTC
CCAGCGAGGAGTGGTAAGAAGTGTTGTGTTTTGTTCACTTTCGTTCTGCG
TTTTTTGTGTTTGTTCGGTTTTGGTTTGGTTTCGCTTTGATTAGTTTCGG
TTCGGTTCGGTTCGGTTCGTTTTGGTTCGGTTCGGTTCGGTTCGGTTCGG
TTCGGTTCGGTCCGGTTCGGTTCGGTTCGGCTCGGTTCGGTTCGGTTCGG
CTCGGTTCGGCTCGGTTCGGCTCGGTTCGGCTCGGTTCGGTTCTGTTCGA
TTCGGTTCGGTTCGGTTCGGTTCGGTTCGGTTCGGTTAGGTTAGGCTAGG
TTAGGTTTTGGGCTGGTTTTGTTTATATTGTTTTGTTTTGTTTTGTTTAA
TTTCGGTTTGGTTTGGTTCGGTCGAGTTCGGTCAGGTGTTTCGTTCGTAT
TGTCATTTATGTTTGCTTGTGATTGTTTCCGTTTTGGTTGTTGTTTTGTT
GTTGTCTTATGCCGGCAGCAAGGAAAGTACGGAGATCTGCTCATGGACGA
GGAGAGCGGTCTCGCGCGTTTGATGGAGACGTTCGCCGAAGACGGCTCAG
ATAACGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11568:3788..9645-

>mRNA_M-pyrifera_M_contig11568.3250.1 ID=mRNA_M-pyrifera_M_contig11568.3250.1|Name=mRNA_M-pyrifera_M_contig11568.3250.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1806bp|location=Sequence derived from alignment at M-pyrifera_M_contig11568:3788..9645- (Macrocystis pyrifera P11B4 male)
ATGCAAAAGTTCTTCGAGATGGAGGAGCTTCATCCCGCCGATCGCGAGTG
GACGAACCGCGACGGTAACGGCAAGGGCGCCGGCTCTCTCTCCGTGTCCG
GGAAGTTCGTCTGGACCCTGGCTGCCGACACCGACGACGACGGCACCCCC
AACGACAAGGAGGGCAAGGAAGGGGGCGGCAAGGACGAGGGAAATGACAA
GGGCAAGAGCAAGAGCAATGGCAATCACAATGGCAGGGACAATGGCGGCA
GCGGCATCGAAGGCGGAAATGCAAAAGTTCTTCGAGATGGAGGAGCTTCA
TCCCGCCGATCGCGAGTGGACGAACCGCGACGGTAACGGCAAGGGCGCCG
GCTCTCTCTCCGTGTCCGGGAAGTTCGTCTGGACCCTGGCTGCCGACACC
GACGACGACGGCACCCCCAACGACAAGGAGGGCAAGGAAGGGGGCGGCAA
GGACGAGGGAAATGACAAGGGCAAGAGCAAGAGCAATGGCAATCACAATG
GCAGGGACAATGGCGGCAGCGGCATCGAAGGCGGAACGCGGCCACTGACT
CCTCCCCCCTCCATCCTTCGGGCTCCAAAGGTGGGTAGTGGAAAGAGCAG
CCTGGTGTCGGCGTTCCTCGGAGAGATGACGAAGGTGGAAGGCAAGGTGT
CCGTCGACGGGAGCGTGGCGTACGTGGCGCAGACGGCGTGGATCATCAAC
GCGTCGCTCAAGGACAACATTCTGATGGGCAGACAACTCGACGAGGAACG
CTATCAGAAAGTTCTGGAAGTGTGCGAAATGGGGCAGCGCGGCCACTGAC
TCCTCCCCCCTCCATCCTTCGGGCTCCAAAGGTGGGTAGTGGAAAGAGCA
GCCTGGTGTCGGCGTTCCTCGGAGAGATGACGAAGGTGGAAGGCAAGGTG
TCCGTCGACGGGAGCGTGGCGTACGTGGCGCAGACGGCGTGGATCATCAA
CGCGTCGCTCAAGGACAACATTCTGATGGGCAGACAACTCGACGAGGAAC
GCTATCAGAAAGTTCTGGAAGTGTGCGAAATGGGGCAGGATTTGAGCCAG
CTGCCCGCCGGAGATTTGACCGAGATCGGGGAAAAGGGCATCAACCTTTC
CGGAGGACAGAAACAGCGGGTTTCGATAGCCAGGGCGGCGTACGCGAACG
CAGATGTTTATATAATGGATGACCCTCTCTCGGCCGTCGATGCACACGTG
GCGAGGATTTGAGCCAGCTGCCCGCCGGAGATTTGACCGAGATCGGGGAA
AAGGGCATCAACCTTTCCGGAGGACAGAAACAGCGGGTTTCGATAGCCAG
GGCGGCGTACGCGAACGCAGATGTTTATATAATGGATGACCCTCTCTCGG
CCGTCGATGCACACGTGGCGAGACACCTGTTCGATCGGTGCTTCACGGAT
TTCCTGAAGGGCAAGACCATCATCCTGTGCGCCAACCAGCTCCAGTTCTT
GCCCCAGACCGACCTGGTGCTGGTGCTTCACGGGGGACGTGTCGTCGAGA
CACCTGTTCGATCGGTGCTTCACGGATTTCCTGAAGGGCAAGACCATCAT
CCTGTGCGCCAACCAGCTCCAGTTCTTGCCCCAGACCGACCTGGTGCTGG
TGCTTCACGGGGGACGTGTCGTCGAGCAAGGAAAGTACGGAGATCTGCTC
ATGGACGAGGAGAGCGGTCTCGCGCGTTTGATGGAGACGTTCGCCGAAGA
CGGCTCAGATAACGACCAAGGAAAGTACGGAGATCTGCTCATGGACGAGG
AGAGCGGTCTCGCGCGTTTGATGGAGACGTTCGCCGAAGACGGCTCAGAT
AACGAC
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