mRNA_M-pyrifera_M_contig115630.3239.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig115630.3239.1
Unique NamemRNA_M-pyrifera_M_contig115630.3239.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: A0A210QMA7_MIZYE (Serine carboxypeptidase CPVL n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QMA7_MIZYE)

HSP 1 Score: 144 bits (362), Expect = 1.090e-38
Identity = 64/105 (60.95%), Postives = 81/105 (77.14%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISF 315
            V+P +ETLLDNYKV+IYNGQ DII+A PL E FL + +W+GQ+ Y + D++VWK+  +D +VAGY R VG F QVIVR AGH+LP DQPER +DMI RF+   SF
Sbjct:  369 VKPWIETLLDNYKVMIYNGQLDIIIAVPLTEAFLLSTKWSGQNNYTTVDRMVWKLNPSDVEVAGYVRTVGKFNQVIVRGAGHILPYDQPERGFDMIQRFIENRSF 473
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: A0A6P4YFI9_BRABE (Carboxypeptidase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YFI9_BRABE)

HSP 1 Score: 144 bits (362), Expect = 1.200e-38
Identity = 64/105 (60.95%), Postives = 82/105 (78.10%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISF 315
            V P V T+++NYKVLIYNGQ D+I+AGPL ENFL +  W+G  +Y  +D+ VWKI  +DT+VAG+ R+VGNF QVIV+  GH+LP DQPERA+DMI RFV+G  F
Sbjct:  376 VAPWVATIMENYKVLIYNGQLDVIVAGPLTENFLWSLPWSGLQQYQKSDRTVWKINPSDTEVAGFVRQVGNFYQVIVKGGGHILPFDQPERAFDMIDRFVSGRGF 480
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: UPI0014589693 (probable serine carboxypeptidase CPVL n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014589693)

HSP 1 Score: 143 bits (361), Expect = 1.580e-38
Identity = 64/105 (60.95%), Postives = 79/105 (75.24%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISF 315
            V+P +ETLLDNYKV+IYNGQ DII+A PL E FL +  W+G  +Y  A++++WK+  TD +VAGY R VGNF QVIVR AGH+LP DQPER YDMI RF+    F
Sbjct:  371 VKPWIETLLDNYKVMIYNGQLDIIIAVPLTEAFLLSTNWSGLKKYTEAERLIWKVNPTDVEVAGYVRNVGNFYQVIVRGAGHILPYDQPERGYDMIQRFIENKPF 475
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: A0A2H4D125_HALDI (Carboxypeptidase (Fragment) n=16 Tax=Haliotis TaxID=6452 RepID=A0A2H4D125_HALDI)

HSP 1 Score: 141 bits (356), Expect = 1.740e-38
Identity = 63/102 (61.76%), Postives = 78/102 (76.47%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNG 306
            V+P + TL+DNY+VLIYNGQ DII+A PL E +L+T QW G +EY  A K++WK+   DT VAGY R+VGNF QVIVR AGH+LP DQP R +DMI RF+ G
Sbjct:  280 VKPWIATLMDNYRVLIYNGQLDIIIAVPLTEAWLQTVQWKGLEEYKKAPKLIWKVNPNDTDVAGYVRQVGNFYQVIVRGAGHILPYDQPVRGFDMIQRFIEG 381
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: C3YSR2_BRAFL (Carboxypeptidase n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YSR2_BRAFL)

HSP 1 Score: 141 bits (355), Expect = 4.390e-38
Identity = 64/105 (60.95%), Postives = 81/105 (77.14%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISF 315
            V+P V T+++NYKVLIYNGQ DII+  PL ENFL +  WT  ++Y  AD+ VWKI  +DT+VAG+ ++V NF QVIV+ AGH+LP DQPERAYDMI RFV+G  F
Sbjct:  309 VKPWVATIMENYKVLIYNGQLDIIVGAPLTENFLWSLPWTRLEQYQKADRTVWKINPSDTEVAGFVKQVDNFYQVIVKGAGHILPFDQPERAYDMIDRFVSGRGF 413
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: A0A8J9W667_BRALA (CPVL protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9W667_BRALA)

HSP 1 Score: 140 bits (352), Expect = 3.150e-37
Identity = 64/105 (60.95%), Postives = 80/105 (76.19%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISF 315
            V+P V T++DNYKVLIYNGQ DII+  PL ENFL +  W+   +Y  AD+ VWKI  +DT+VAG+ R+V NF QVIV+ AGH+LP DQPERA+DMI RFV+G  F
Sbjct:  371 VKPWVATIMDNYKVLIYNGQLDIIVGAPLTENFLWSLPWSKLQQYQKADRTVWKINPSDTEVAGFVRQVDNFYQVIVKGAGHILPFDQPERAFDMIDRFVSGRGF 475
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: A0A6P4YFI3_BRABE (Carboxypeptidase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YFI3_BRABE)

HSP 1 Score: 139 bits (350), Expect = 6.230e-37
Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISF 315
            V+P V  +L+NYKVLIYNGQ DII+  PL ENFL +  W+G  +Y   D+ VWK+  +DT+VAG+ R+VGNF QVIV+  GH+LP DQPERA+DMI RFV+G  F
Sbjct:  372 VKPWVAAILENYKVLIYNGQLDIIVGAPLTENFLWSLPWSGLKQYQKTDRTVWKVNPSDTEVAGFVRQVGNFYQVIVKGGGHILPFDQPERAFDMIDRFVSGRGF 476
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: UPI000D72A313 (probable serine carboxypeptidase CPVL n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72A313)

HSP 1 Score: 139 bits (349), Expect = 9.050e-37
Identity = 62/106 (58.49%), Postives = 81/106 (76.42%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISFA 318
            V+P +  L+DNYKV+IYNGQ DII+A PL E +L+T +W+G   Y +AD+++WK+  +D++VAGY R+V NF QVIVRNAGH+LP DQP   YDMI RFV   SFA
Sbjct:  375 VKPWIAVLMDNYKVMIYNGQLDIIIAVPLTEAWLQTVEWSGLPRYKTADRLIWKVNPSDSEVAGYVRQVDNFYQVIVRNAGHILPADQPVWGYDMIQRFVENRSFA 480
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: A0A4W5L0V1_9TELE (Carboxypeptidase vitellogenic like n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5L0V1_9TELE)

HSP 1 Score: 134 bits (336), Expect = 2.600e-36
Identity = 58/105 (55.24%), Postives = 78/105 (74.29%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISF 315
            ++P + TL+DNY+VLIY+GQ D+I+A PL E FL T  WTG DE+  A +  WKI+  DT+VAGY R+VG F QVI+R  GH+LP DQP+R++DMI RF++   F
Sbjct:  190 IKPWLATLMDNYRVLIYSGQLDVIVAAPLTERFLPTVNWTGADEFNKASRFHWKIQPEDTEVAGYVRQVGEFYQVIIRGGGHILPYDQPQRSFDMIDRFLSTQGF 294
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BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Match: UPI0006B0C556 (probable serine carboxypeptidase CPVL n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0C556)

HSP 1 Score: 136 bits (342), Expect = 1.030e-35
Identity = 61/107 (57.01%), Postives = 84/107 (78.50%), Query Frame = 1 
Query:    1 VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADKIVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFVNGISFAD 321
            V+P  E L+DNYKV+IY+GQ DII+A PL E+FL++ +W   +EY ++ + +WKI++TD  VAGY R+V +F QV+VRNAGH+LP DQP  A+DMI+RFVNG SF +
Sbjct:  374 VKPWFEVLMDNYKVMIYSGQLDIIIAFPLTESFLQSVKWKYSEEYKNSSRQIWKIKTTDKMVAGYVRQVHDFYQVLVRNAGHILPYDQPRIAFDMISRFVNGKSFQN 480
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115630.3239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A210QMA7_MIZYE1.090e-3860.95Serine carboxypeptidase CPVL n=1 Tax=Mizuhopecten ... [more]
A0A6P4YFI9_BRABE1.200e-3860.95Carboxypeptidase n=1 Tax=Branchiostoma belcheri Ta... [more]
UPI00145896931.580e-3860.95probable serine carboxypeptidase CPVL n=1 Tax=Pect... [more]
A0A2H4D125_HALDI1.740e-3861.76Carboxypeptidase (Fragment) n=16 Tax=Haliotis TaxI... [more]
C3YSR2_BRAFL4.390e-3860.95Carboxypeptidase n=2 Tax=Branchiostoma floridae Ta... [more]
A0A8J9W667_BRALA3.150e-3760.95CPVL protein n=1 Tax=Branchiostoma lanceolatum Tax... [more]
A0A6P4YFI3_BRABE6.230e-3759.05Carboxypeptidase n=1 Tax=Branchiostoma belcheri Ta... [more]
UPI000D72A3139.050e-3758.49probable serine carboxypeptidase CPVL n=1 Tax=Poma... [more]
A0A4W5L0V1_9TELE2.600e-3655.24Carboxypeptidase vitellogenic like n=1 Tax=Hucho h... [more]
UPI0006B0C5561.030e-3557.01probable serine carboxypeptidase CPVL n=1 Tax=Limu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115630contigM-pyrifera_M_contig115630:235..564 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score141.4
Seed ortholog evalue2.6e-31
Seed eggNOG ortholog7739.XP_002600751.1
Preferred nameCPVL
KEGG koko:K09645
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0006403,GO:0006508,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009056,GO:0009057,GO:0009987,GO:0015931,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0033036,GO:0033227,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0050657,GO:0050658,GO:0051179,GO:0051234,GO:0051236,GO:0051603,GO:0070008,GO:0070011,GO:0071702,GO:0071704,GO:0071705,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.serine-type carboxypeptidase activity
EggNOG OGs38FWP@33154,3BC5G@33208,3CVVJ@33213,48A8N@7711,COG2939@1,KOG1282@2759
COG Functional cat.O
Best tax levelChordata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons1
Model size330
Cds size330
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815672.2870898-CDS-M-pyrifera_M_contig115630:234..5641622815672.2870898-CDS-M-pyrifera_M_contig115630:234..564Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115630 235..564 -
1692277514.913906-CDS-M-pyrifera_M_contig115630:234..5641692277514.913906-CDS-M-pyrifera_M_contig115630:234..564Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115630 235..564 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115630.3239.1prot_M-pyrifera_M_contig115630.3239.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig115630 235..564 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig115630.3239.1

>prot_M-pyrifera_M_contig115630.3239.1 ID=prot_M-pyrifera_M_contig115630.3239.1|Name=mRNA_M-pyrifera_M_contig115630.3239.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
VRPQVETLLDNYKVLIYNGQNDIILAGPLCENFLRTAQWTGQDEYLSADK
IVWKIESTDTQVAGYAREVGNFRQVIVRNAGHLLPLDQPERAYDMITRFV
NGISFADNQ*
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mRNA from alignment at M-pyrifera_M_contig115630:235..564-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig115630.3239.1 ID=mRNA_M-pyrifera_M_contig115630.3239.1|Name=mRNA_M-pyrifera_M_contig115630.3239.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig115630:235..564- (Macrocystis pyrifera P11B4 male)
GTGAGGCCGCAGGTTGAGACCCTCCTGGACAACTACAAGGTGCTCATCTA
CAACGGCCAGAACGACATCATCCTCGCTGGCCCGCTCTGCGAGAACTTCC
TCCGCACCGCCCAGTGGACCGGCCAGGACGAGTACCTCTCTGCAGACAAG
ATCGTGTGGAAGATCGAGTCCACTGATACGCAGGTAGCTGGATACGCCCG
CGAGGTGGGCAACTTCCGCCAGGTGATCGTGCGCAACGCCGGCCACCTTT
TGCCTCTGGACCAGCCGGAGCGCGCGTACGACATGATCACCCGCTTCGTC
AACGGCATCTCCTTTGCAGACAACCAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig115630:235..564-

>mRNA_M-pyrifera_M_contig115630.3239.1 ID=mRNA_M-pyrifera_M_contig115630.3239.1|Name=mRNA_M-pyrifera_M_contig115630.3239.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig115630:235..564- (Macrocystis pyrifera P11B4 male)
GTGAGGCCGCAGGTTGAGACCCTCCTGGACAACTACAAGGTGCTCATCTA
CAACGGCCAGAACGACATCATCCTCGCTGGCCCGCTCTGCGAGAACTTCC
TCCGCACCGCCCAGTGGACCGGCCAGGACGAGTACCTCTCTGCAGACAAG
ATCGTGTGGAAGATCGAGTCCACTGATACGCAGGTAGCTGGATACGCCCG
CGAGGTGGGCAACTTCCGCCAGGTGATCGTGCGCAACGCCGGCCACCTTT
TGCCTCTGGACCAGCCGGAGCGCGCGTACGACATGATCACCCGCTTCGTC
AACGGCATCTCCTTTGCAGACAACCAGTGAGTGAGGCCGCAGGTTGAGAC
CCTCCTGGACAACTACAAGGTGCTCATCTACAACGGCCAGAACGACATCA
TCCTCGCTGGCCCGCTCTGCGAGAACTTCCTCCGCACCGCCCAGTGGACC
GGCCAGGACGAGTACCTCTCTGCAGACAAGATCGTGTGGAAGATCGAGTC
CACTGATACGCAGGTAGCTGGATACGCCCGCGAGGTGGGCAACTTCCGCC
AGGTGATCGTGCGCAACGCCGGCCACCTTTTGCCTCTGGACCAGCCGGAG
CGCGCGTACGACATGATCACCCGCTTCGTCAACGGCATCTCCTTTGCAGA
CAACCAGTGA
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