mRNA_M-pyrifera_M_contig11557.3223.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: A0A6H5KQA5_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA5_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.530e-27 Identity = 75/117 (64.10%), Postives = 89/117 (76.07%), Query Frame = 1
Query: 352 RVRVLCRFRRFLDTESEW-AARRAGWLDFDTSGGXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGGS 699
RVRVLCRFRR ++ + E + R WL F GGXXXXXXXXX G + LD V+ R+GGAWS R FD+V KPGV Q +VY V+RVAHGV+QGFNGTIFAYGQTG+GKT+TMGG+
Sbjct: 131 RVRVLCRFRRTVERDGEERGSPRGKWLVF--GGGXXXXXXXXXHEGGEGAPLDTVSVRMGGAWSTRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGAGKTYTMGGA 245
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: D8LL93_ECTSI (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL93_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 9.810e-22 Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 523 VGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGGS 699
+GGAWSRR FD+V KPGV Q +VY V+RVAHGV+QGFNGTIFAYGQTGSGKT+TMGG+
Sbjct: 1 MGGAWSRRGFDRVLKPGVDQAQVYSDVKRVAHGVSQGFNGTIFAYGQTGSGKTYTMGGA 59
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: A0A6B0R8C4_9CETA (Uncharacterized protein n=1 Tax=Bos mutus TaxID=72004 RepID=A0A6B0R8C4_9CETA) HSP 1 Score: 65.5 bits (158), Expect = 4.340e-8 Identity = 43/117 (36.75%), Postives = 55/117 (47.01%), Query Frame = 1
Query: 349 GRVRVLCRFRRFLDTESEWAARRAGWLDFDTSG-GXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGG 696
G +RV CR R L ES G+L F + G + + + A G FD+VF PG GQ EV+E++ + G+ IFAYGQTGSGKTFTM G
Sbjct: 307 GNIRVFCRVRPVLPGES---TPSPGFLQFPSGPCGPSDPPTRLSLSRSDERRGTLSGAPAGPTRHEFSFDRVFPPGSGQDEVFEEISMLVQSALDGYPVCIFAYGQTGSGKTFTMEG 420
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: W5PIR9_SHEEP (Kinesin-like protein n=40 Tax=Artiodactyla TaxID=91561 RepID=W5PIR9_SHEEP) HSP 1 Score: 64.7 bits (156), Expect = 6.650e-8 Identity = 43/117 (36.75%), Postives = 55/117 (47.01%), Query Frame = 1
Query: 349 GRVRVLCRFRRFLDTESEWAARRAGWLDFDTSG-GXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGG 696
G +RV CR R L ES G+L F + G + + + A G FD+VF PG GQ EV+E++ + G+ IFAYGQTGSGKTFTM G
Sbjct: 332 GNIRVFCRVRPVLPGES---TPSPGFLQFPSGPCGPSDPPTRLSLSRSDERRGTLSGAPAGPTRHDFSFDRVFPPGSGQDEVFEEISMLVQSALDGYPVCIFAYGQTGSGKTFTMEG 445
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: A0A7F8R7B1_LEPWE (kinesin-like protein KIFC1 n=1 Tax=Leptonychotes weddellii TaxID=9713 RepID=A0A7F8R7B1_LEPWE) HSP 1 Score: 62.4 bits (150), Expect = 3.610e-7 Identity = 43/117 (36.75%), Postives = 54/117 (46.15%), Query Frame = 1
Query: 349 GRVRVLCRFRRFLDTESEWAARRAGWLDFDTS-GGXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGG 696
G +RV CR R L E G+L F + GG V D + A FD+VF PG GQ +V+E++ + G+ IFAYGQTGSGKTFTM G
Sbjct: 367 GNIRVFCRVRPVLPGEP---TPSPGFLLFPSGPGGPSDPPTRLSVSRSDDRRGTLSGAPAPTTRHDFSFDRVFPPGSGQDQVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEG 480
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: A0A384AI98_BALAS (Kinesin-like protein n=5 Tax=Artiodactyla TaxID=91561 RepID=A0A384AI98_BALAS) HSP 1 Score: 62.4 bits (150), Expect = 3.760e-7 Identity = 43/117 (36.75%), Postives = 55/117 (47.01%), Query Frame = 1
Query: 349 GRVRVLCRFRRFLDTESEWAARRAGWLDFDTS-GGXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGG 696
G VRV CR R L ES +G+L F + G + + + A FD+VF PG GQ EV+E++ + G+ IFAYGQTGSGKTFTM G
Sbjct: 311 GNVRVFCRVRPVLPGES---TPPSGFLLFPSGPSGPSDPPTRLSLSRSDERRGTLSGAPAAPTRHDFSFDRVFPPGSGQDEVFEEISMLVQSALDGYPVCIFAYGQTGSGKTFTMEG 424
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: A0A6J0WNC7_ODOVR (Kinesin-like protein n=7 Tax=Odocoileus virginianus texanus TaxID=9880 RepID=A0A6J0WNC7_ODOVR) HSP 1 Score: 62.4 bits (150), Expect = 3.830e-7 Identity = 42/117 (35.90%), Postives = 54/117 (46.15%), Query Frame = 1
Query: 349 GRVRVLCRFRRFLDTESEWAARRAGWLDFDTSG-GXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGG 696
G +RV CR R L ES G+L F + G + + + A FD+VF PG GQ EV+E++ + G+ IFAYGQTGSGKTFTM G
Sbjct: 308 GNIRVFCRVRPVLPGES---TPSPGFLQFPSGPCGPSDPPTRLSLSRSDERRGTLSGAPAAPTRHDFSFDRVFPPGSGQDEVFEEISMLVQSALDGYPVCIFAYGQTGSGKTFTMEG 421
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: A0A6J2DUA6_ZALCA (kinesin-like protein KIFC1 isoform X4 n=1 Tax=Zalophus californianus TaxID=9704 RepID=A0A6J2DUA6_ZALCA) HSP 1 Score: 62.0 bits (149), Expect = 4.790e-7 Identity = 43/117 (36.75%), Postives = 54/117 (46.15%), Query Frame = 1
Query: 349 GRVRVLCRFRRFLDTESEWAARRAGWLDFDTS-GGXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGG 696
G +RV CR R L E G+L F + GG V D + A FD+VF PG GQ +V+E++ + G+ IFAYGQTGSGKTFTM G
Sbjct: 335 GNIRVFCRVRPVLAGEP---TPSPGFLLFPSGPGGPSDPPTRLSVSRSDDRRGTLSGAPAPTTRHDFSFDRVFPPGSGQDQVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEG 448
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: A0A8J5ZYF7_GALPY (Kinesin-like protein n=4 Tax=Talpidae TaxID=9373 RepID=A0A8J5ZYF7_GALPY) HSP 1 Score: 62.0 bits (149), Expect = 4.910e-7 Identity = 43/117 (36.75%), Postives = 54/117 (46.15%), Query Frame = 1
Query: 349 GRVRVLCRFRRFLDTESEWAARRAGWLDFDTS-GGXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRRKFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGG 696
G +RV CR R L E G+L F + GG + D + A FD+VF PG GQ EV+E++ + G+ IFAYGQTGSGKTFTM G
Sbjct: 268 GNIRVFCRVRPVLPGEP---TPLPGFLLFPSGPGGPSDPPTRLSLSRSDDRRGTLSGAPAPTTRHDFSFDRVFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEG 381
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Match: A0A8B6YBN3_CAMFR (Kinesin-like protein n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A8B6YBN3_CAMFR) HSP 1 Score: 62.0 bits (149), Expect = 5.020e-7 Identity = 43/117 (36.75%), Postives = 53/117 (45.30%), Query Frame = 1
Query: 349 GRVRVLCRFRRFLDTESEWAARRAGWLDFDTSGGXXXXXXXXXVGGEQDEGLDIVAARVGGAWSRR-KFDKVFKPGVGQGEVYEQVERVAHGVAQGFNGTIFAYGQTGSGKTFTMGG 696
G +RV CR R L ES G+L F G DE ++ FD+VF PG GQ EV+E++ + G+ IFAYGQTGSGKTFTM G
Sbjct: 309 GNIRVFCRVRPVLPGES---TPPPGFLLFPPGPGGPSDPPTRLSLSRSDERRGTLSGAPAPTTRHDFSFDRVFPPGSGQDEVFEEISMLVQSALDGYPVCIFAYGQTGSGKTFTMEG 422 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11557.3223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11557.3223.1 >prot_M-pyrifera_M_contig11557.3223.1 ID=prot_M-pyrifera_M_contig11557.3223.1|Name=mRNA_M-pyrifera_M_contig11557.3223.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=309bp IAGSSSSGGGGTTRSAFDVLPPTPPCSDPLPDATAVATAATSTATATINTback to top mRNA from alignment at M-pyrifera_M_contig11557:2081..4072+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11557.3223.1 ID=mRNA_M-pyrifera_M_contig11557.3223.1|Name=mRNA_M-pyrifera_M_contig11557.3223.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1992bp|location=Sequence derived from alignment at M-pyrifera_M_contig11557:2081..4072+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11557:2081..4072+ >mRNA_M-pyrifera_M_contig11557.3223.1 ID=mRNA_M-pyrifera_M_contig11557.3223.1|Name=mRNA_M-pyrifera_M_contig11557.3223.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1854bp|location=Sequence derived from alignment at M-pyrifera_M_contig11557:2081..4072+ (Macrocystis pyrifera P11B4 male)back to top |