mRNA_M-pyrifera_M_contig115510.3216.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: A0A0N7L6F7_PLAHL (Ribosomal protein l15 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6F7_PLAHL) HSP 1 Score: 86.7 bits (213), Expect = 2.490e-18 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 1 ELTMRDLRESGCAS-KHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKGQDGAVTVP---RPPPKEIEYYLRDETRGYLSQKVQ 315
++TM+ L +SG + V+ GI LLG GS+ F K+ ++VS+AS+ AIEA+E NGGS+V+VY+ L LR LK T+P RP PK++ YY E RGYLS ++Q
Sbjct: 131 KITMKSLVDSGLVTCSRVKHGIKLLGNGSQYFTTKLDIEVSQASKSAIEAVEANGGSIVSVYYNRLALRALLKPHKFE-TLPQSARPNPKKLTYYTNYEKRGYLSPEIQ 238
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: A0A2A9NHI3_9AGAR (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NHI3_9AGAR) HSP 1 Score: 85.5 bits (210), Expect = 6.530e-18 Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 4 LTMRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKGQDGAVTVPRPPPKEIEYYLRDETRGYLSQKV 312
+T R+L SGC +V DGI +LG G++ FD+K+++ SRAS+ AIEAIE+NGG VV +YH L LR + G+ ++ +I +Y + RGYLS +
Sbjct: 111 ITARELLLSGCVH-NVHDGIKVLGTGAKFFDQKIYITPSRASKGAIEAIEKNGGKVVCLYHNDLALRDSVNGRSDRISAAPTRRSDIMWYSKHRNRGYLSSET 212
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: A0A7M5V3H3_9CNID (39S ribosomal protein L15, mitochondrial n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V3H3_9CNID) HSP 1 Score: 84.7 bits (208), Expect = 1.370e-17 Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 1
Query: 1 ELTMRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKGQ--DGAVTVPRPPPKEIEYYLRDETRGYLSQKVQIDIAKQ 333
++T+ L SG S ++DG+ +LG G+ F K+ ++VSRA+Q AIEAIERNGG++ TVYH + LR LK + D RP K I +Y + RGYL+ +I K+
Sbjct: 121 KITIETLWRSGAVSHKIKDGVRILGTGATWFQGKIDIEVSRATQSAIEAIERNGGNIKTVYHDKIALRALLKPEKYDIRPRAARPSHKHILFYADAKNRGYLAHPDEISKLKE 233
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: A0A8B6XPK3_HYDVU (39S ribosomal protein L15, mitochondrial n=3 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XPK3_HYDVU) HSP 1 Score: 79.3 bits (194), Expect = 1.570e-15 Identity = 45/109 (41.28%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 1 ELTMRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKGQDGAVTVPRPPP---KEIEYYLRDETRGYLSQKVQI 318
++T+ L +SG S ++DGI LLG GS F+ K+ ++V+RAS+ AIEA+ERNGG++ VYH + LR LK + + +PRP K + +Y + RGYL+ +I
Sbjct: 121 KITLSTLWKSGAVSGRIKDGIKLLGGGSTWFEGKIDIEVTRASKSAIEAVERNGGTIKAVYHDRVALRCALKPEKYEI-MPRPARPNNKLLLWYSDPDNRGYLANPEEI 228
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: A0A4S4LFK2_9AGAM (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LFK2_9AGAM) HSP 1 Score: 78.2 bits (191), Expect = 3.640e-15 Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 4 LTMRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKGQDGAVTVPRPPPKEIEYYLRDETRGYLSQKVQI 318
+T R+L SGC +V DGI LLG GS ++++ SRASQ AI+AIE+ GG+V+ Y+ L+LR +KGQ + ++I +Y+ RGYLS +
Sbjct: 111 ITARELLLSGCVH-NVHDGIKLLGDGSEHLKSPIYIEPSRASQSAIKAIEKRGGTVICKYYNALSLRDCVKGQTDRLDAAPSRRQDIHWYMNWRNRGYLSSSALV 214
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: UPI00106CD038 (uncharacterized protein LOC114518178 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CD038) HSP 1 Score: 77.4 bits (189), Expect = 6.700e-15 Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 4 LTMRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKG-QDGAVTVPR---PPPKEIEYYLRDETRGYLSQKVQID 321
+ M L +G S+ ++DG+ LLG GS F+ K+ ++VSRAS+KAIE +ER GG V Y+T L LR +K + +PR PPPK +YY RGYL+ ++D
Sbjct: 119 INMNTLWTTGAVSR-LQDGVCLLGTGSEIFNSKIDIEVSRASKKAIETVERQGGQVTCAYYTKLGLRVLVKPWKFDTKRLPRKAAPPPKLEKYYKDPSKRGYLADPQEVD 227
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: UPI001F035497 (50S ribosomal protein L15-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F035497) HSP 1 Score: 77.4 bits (189), Expect = 8.370e-15 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 4 LTMRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKG-QDGAVTVPR---PPPKEIEYYLRDETRGYLSQKVQIDIAKQR 336
+ M L SG SK + DG+ LLG GS F+ ++ ++VSRAS+KAIE+IER GG++ Y+T L LR LK + +PR PPPK +YY RGYL+ D+ K+R
Sbjct: 118 IDMNTLWRSGAVSK-IGDGVCLLGTGSETFNSQIKIEVSRASKKAIESIERQGGNITCSYYTKLGLRVLLKPWKFNEKRLPRRAAPPPKLEKYYRDPSKRGYLADHE--DVKKER 229
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: A0A2H3J7U0_WOLCO (Ribosomal protein L15 n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J7U0_WOLCO) HSP 1 Score: 77.0 bits (188), Expect = 1.030e-14 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 4 LTMRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKGQDGAVTVPRPPPKEIEYYLRDETRGYLS 303
+T R+L SGC + V DG+ +LG GS+ +H+ SRASQ AI AIE+ GGSV+ Y+ PL LR +KG+ + ++I +Y RGYLS
Sbjct: 113 ITARELLLSGCVHQ-VHDGVKILGNGSQFLKSPIHINASRASQSAIRAIEKLGGSVICNYYNPLALRDCVKGRTDRLQAAPTHRRDILWYTNWHNRGYLS 211
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: A0A7S0NRH6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NRH6_9EUKA) HSP 1 Score: 74.7 bits (182), Expect = 1.250e-14 Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = 1
Query: 4 LTMRDLRESGCASKHVRD-GIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKGQDGAVT---VPRP---PPKEIEYYLRDETRGYL 300
+T R +R+SG + R G+ LLG G+ RF + ++V A++ AIEA+ER GG++ TVY++ LT+R HLK +PRP PPK + Y+ E RGYL
Sbjct: 18 ITARTMRDSGLLTLRQRHAGVKLLGGGASRFSTPISIEVQEATKVAIEAVERAGGTITTVYYSRLTMRAHLKPDKILAKGRLLPRPALPPPKLMRRYVDPEKRGYL 123
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Match: A0A4Y7QCA2_9AGAM (Ribosomal protein L15 n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7QCA2_9AGAM) HSP 1 Score: 75.1 bits (183), Expect = 5.560e-14 Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 4 LTMRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNGGSVVTVYHTPLTLRHHLKGQDGAVTVPRPPPKEIEYYLRDETRGYLS 303
+T R+L SGC +V DGI LLG GS ++H+ SRASQ AIEAIER GG+V ++ L LR +KG+ + ++I +Y RGYLS
Sbjct: 112 ITARELLLSGCVH-NVHDGIKLLGDGSEHLRSEIHITPSRASQSAIEAIERLGGTVFCKHYNVLALRDCVKGRTDRIAAAPTRKQDIGWYTNWRNRGYLS 210 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115510.3216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115510.3216.1 >prot_M-pyrifera_M_contig115510.3216.1 ID=prot_M-pyrifera_M_contig115510.3216.1|Name=mRNA_M-pyrifera_M_contig115510.3216.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp MRDLRESGCASKHVRDGIALLGKGSRRFDKKVHLKVSRASQKAIEAIERNback to top mRNA from alignment at M-pyrifera_M_contig115510:203..556- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115510.3216.1 ID=mRNA_M-pyrifera_M_contig115510.3216.1|Name=mRNA_M-pyrifera_M_contig115510.3216.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig115510:203..556- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115510:203..556- >mRNA_M-pyrifera_M_contig115510.3216.1 ID=mRNA_M-pyrifera_M_contig115510.3216.1|Name=mRNA_M-pyrifera_M_contig115510.3216.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig115510:203..556- (Macrocystis pyrifera P11B4 male)back to top |