prot_M-pyrifera_M_contig11551.3214.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11551.3214.1
Unique Nameprot_M-pyrifera_M_contig11551.3214.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length108
Homology
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BLAST of mRNA_M-pyrifera_M_contig11551.3214.1 vs. uniprot
Match: D7FM05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM05_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 9.470e-46
Identity = 81/107 (75.70%), Postives = 90/107 (84.11%), Query Frame = 0 
Query:    1 MYGSTATTPGAAQSRGLLDDSLAVQTETSNIADGVMGRLFGQRESLETAQQRLGDVRGMTDSARLHLKDMQRKAYLQKIFLYSAIAVLSILIILVAYRETTNSGRLF 107
            MYGST TTP +AQSR LLDDSLAVQ ETSN+AD VM RLFGQRE+LE+AQQRLGD+RGMTD ARLHLK+M++KA  QKI LY  IA+LSILI LV YRE TN G LF
Sbjct:    1 MYGSTTTTPSSAQSRRLLDDSLAVQNETSNMADDVMARLFGQRETLESAQQRLGDMRGMTDEARLHLKEMEQKALRQKICLYLTIALLSILICLVIYREVTNGGHLF 107
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11551.3214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM05_ECTSI9.470e-4675.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 5..78
e-value: 1.2E-10
score: 43.4
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 17..98
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1Bcoord: 17..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 13..70
NoneNo IPR availableTMHMMTMhelixcoord: 79..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11551contigM-pyrifera_M_contig11551:1355..7907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11551.3214.1mRNA_M-pyrifera_M_contig11551.3214.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11551 1355..7907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11551.3214.1 ID=prot_M-pyrifera_M_contig11551.3214.1|Name=mRNA_M-pyrifera_M_contig11551.3214.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
MYGSTATTPGAAQSRGLLDDSLAVQTETSNIADGVMGRLFGQRESLETAQ
QRLGDVRGMTDSARLHLKDMQRKAYLQKIFLYSAIAVLSILIILVAYRET
TNSGRLF*
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