mRNA_M-pyrifera_M_contig115324.3188.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115324.3188.1 vs. uniprot
Match: A0A517WJB2_9PLAN (Uncharacterized protein n=3 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WJB2_9PLAN) HSP 1 Score: 369 bits (947), Expect = 1.970e-120 Identity = 185/188 (98.40%), Postives = 188/188 (100.00%), Query Frame = 1
Query: 1 PPPDLAKMINAITLFDYKVADEFVAVHEVQYDPESSEKTMFFNFINHNEKAAQFRPERVRAKVETELADLPRYIPGSLQMDFDKGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNSLPPQGKNQAHPKGIGVVAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTNIVRSARSALDG 564
PPPDLAKMINAITLFDYKVADEFVAVHEVQYDP+SSEKTMFFNFINHNEKAAQFRPERVRAKVETELADLPRYIPGSLQMDF+KGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNSLPPQGKNQAHPKGIG+VAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTNIVRSARSALDG
Sbjct: 605 PPPDLAKMINAITLFDYKVADEFVAVHEVQYDPKSSEKTMFFNFINHNEKAAQFRPERVRAKVETELADLPRYIPGSLQMDFEKGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNSLPPQGKNQAHPKGIGIVAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTNIVRSARSALDG 792
BLAST of mRNA_M-pyrifera_M_contig115324.3188.1 vs. uniprot
Match: A0A518AD48_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AD48_9PLAN) HSP 1 Score: 196 bits (499), Expect = 3.200e-55 Identity = 104/189 (55.03%), Postives = 134/189 (70.90%), Query Frame = 1
Query: 1 PPPDLAKMINAITLFDYKVADEFVAVHEVQYDPESSEKTMFFNFINHNEKAAQFRPERVRAKVETELA-DLPRYIPGSLQMDFDKGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNSLPPQGKNQAHPKGIGVVAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTNIVRSARSALDG 564
PP DLA M+N++ F++KVADE VAVH+VQYDPESSEKT++F F N NE + E +R K + LA L RYIP SLQMDFD+GT ++ +RIG +++ E + SL + +Y+ + PPQGK AHP+GIG+VAG+ A GSS G+ A+GKHLKVTIQYGLYAGK N+ RSAR+ALDG
Sbjct: 604 PPADLANMVNSLFFFNFKVADEIVAVHDVQYDPESSEKTLYFQFANRNEFGPRNDREYIRDKTDGVLAYRLDRYIPNSLQMDFDQGTFNINIRIGGNEQSEIRTITESLGNNKIDATYVKTDPPQGKGNAHPRGIGIVAGAGAGMVTGSS-----GKQAEGKHLKVTIQYGLYAGKQNVARSARTALDG 787
BLAST of mRNA_M-pyrifera_M_contig115324.3188.1 vs. uniprot
Match: A0A6I6AHL2_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AHL2_9PLAN) HSP 1 Score: 193 bits (491), Expect = 4.190e-54 Identity = 102/189 (53.97%), Postives = 133/189 (70.37%), Query Frame = 1
Query: 1 PPPDLAKMINAITLFDYKVADEFVAVHEVQYDPESSEKTMFFNFINHNEKAAQFRPERVRAKVETELAD-LPRYIPGSLQMDFDKGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNSLPPQGKNQAHPKGIGVVAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTNIVRSARSALDG 564
PP DL+KM+N++ F ++VADE VAVH+VQYDPESSEK+M F F+NHN + +R K E L L RY+P SLQMDFD+GT ++MRIG +++ E ++ + + ++Y+ ++PPQGK +AHP GIG+V S A GSS G+LA GK+LKVTIQYGLYAGK NIVRSARSALDG
Sbjct: 603 PPADLSKMVNSLFFFHFRVADEIVAVHDVQYDPESSEKSMSFRFVNHNAIGPHIDRDYIRGKTEGVLRYMLHRYVPNSLQMDFDQGTFDIKMRIGGNEQSEIQTILEWQGKNKIDMTYVKTVPPQGKGKAHPLGIGMVTESGAXXAVGSS-----GKLATGKYLKVTIQYGLYAGKLNIVRSARSALDG 786
BLAST of mRNA_M-pyrifera_M_contig115324.3188.1 vs. uniprot
Match: A6C9F4_9PLAN (Manganese transport regulator MntR n=4 Tax=Planctomycetaceae TaxID=126 RepID=A6C9F4_9PLAN) HSP 1 Score: 130 bits (326), Expect = 1.390e-31 Identity = 76/190 (40.00%), Postives = 112/190 (58.95%), Query Frame = 1
Query: 1 PPPDLAKMINAITLFDYKVADEFVAVHEVQYDPESSEKTMFFNFINHNEKAAQFRPERVRAKVETELADLPRYIPGSLQMDFDKGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNSLPPQGKNQAHPKGIGVVAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTN--IVRSARSALDG 564
PP DL KM+N I D V E V+V +V YDPE+SEKTM+F+FIN +K QF + + L + YIPGSLQMDFD+GT ++R+R+ DD + +L R+ L+ ++LN+ P+ +P+ G+ A +A+ PA L K ++++VT++YGLY G+ +SAR ALDG
Sbjct: 500 PPDDLIKMVNGIRSLDLDVDQELVSVEDVVYDPEASEKTMYFSFINQGQKLHQFDKTFTQHMADGNLGAIGGYIPGSLQMDFDEGTFNIRVRVVEDDARDIETATTALARIKLECTHLNTTLPESSGNGNPQQPGMTAKQSAE---------PA--LVK-ENVRVTVKYGLYGGRATGKPEKSARDALDG 677
BLAST of mRNA_M-pyrifera_M_contig115324.3188.1 vs. uniprot
Match: A0A517RN50_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RN50_9PLAN) HSP 1 Score: 124 bits (310), Expect = 2.100e-29 Identity = 70/188 (37.23%), Postives = 106/188 (56.38%), Query Frame = 1
Query: 1 PPPDLAKMINAITLFDYKVADEFVAVHEVQYDPESSEKTMFFNFINHNEKAAQFRPERVRAKVETELADLPRYIPGSLQMDFDKGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNSLPPQGKNQAHPKGIGVVAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTNIVRSARSALDG 564
PP D K I++I +V D+ V++ +V YDPE SEKTM F+F+N+ ++ AQF + E L L YI SLQMDF +GT +R+R G ++ E V + L + + ++LN++PP+ G+V+ S QP +A ++LKVTIQ+GLY+G+ + +SAR LDG
Sbjct: 562 PPGDFLKQIHSIGFLKLEVDDKIVSIEDVDYDPEVSEKTMIFSFVNNGQRLAQFDEINQQRSAENNLHGLSNYISRSLQMDFQQGTFKIRLRAGRNEAAEIQAVTNGLNAIKISCTHLNTIPPKPGGPTGKSIPGMVSNSN----------QPT-PIASDQNLKVTIQFGLYSGRGKMAKSARDVLDG 738
BLAST of mRNA_M-pyrifera_M_contig115324.3188.1 vs. uniprot
Match: A0A3D3RDG6_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A3D3RDG6_9PLAN) HSP 1 Score: 123 bits (309), Expect = 2.740e-29 Identity = 78/191 (40.84%), Postives = 113/191 (59.16%), Query Frame = 1
Query: 1 PPPDLAKMINAITLFDYKVADEFVAVHEVQYDPESSEKTMFFNFINHNEKAAQFRPERVRAKVETELADLPRYIPGSLQMDFDKGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNS-LPPQGKNQAHPKGIGVVAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTN--IVRSARSALDG 564
PP DL KM+N I D V E V+V +V YDPE+SEKTM+F+F+N +K QF + + L + YIPGSLQMDFD+GT ++R+R+ DD + + I++L R+NL+ ++ + LP G N P G+ A + + PA L K +++KVT++YGLY G+ SAR+ALDG
Sbjct: 500 PPDDLIKMVNGIRSLDLDVDQELVSVEDVVYDPEASEKTMYFSFVNQGQKLHQFDKIFKQHVADGNLGAIGGYIPGSLQMDFDQGTFNIRVRVVEDDARDIESAINALARINLECTHQQTKLPESGGNPLQP---GMTAKQSTE---------PA--LIK-ENVKVTVKYGLYGGRATGKPQSSARNALDG 675
BLAST of mRNA_M-pyrifera_M_contig115324.3188.1 vs. uniprot
Match: A0A517VL72_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VL72_9PLAN) HSP 1 Score: 123 bits (308), Expect = 3.740e-29 Identity = 70/190 (36.84%), Postives = 111/190 (58.42%), Query Frame = 1
Query: 1 PPPDLAKMINAITLFDYKVADEFVAVHEVQYDPESSEKTMFFNFINHNEKAAQFRPERVRAKVETELADLPRYIPGSLQMDFDKGTLSVRMRIGLDDRWEKNNVIHSLTRLNLQLSYLNSLPPQGKNQAHPKGIGVVAGSAADKGQGSSMLQPAGQLAKGKHLKVTIQYGLYAGKTN--IVRSARSALDG 564
PP DL KM+N I D V E V+V + +YDP++SEKTM+F+F+N +K QF + + L + YIPGSL+MD+D+GT ++R+R+ +D + SL R+ ++ ++L ++ P+ +P G+ A +A+ PA L K +++KVT++YGLY G+ +SAR ALDG
Sbjct: 497 PPDDLTKMVNGIRFLDLDVDQELVSVEDFEYDPQASEKTMYFSFVNRGQKLPQFDKITQKHVADGNLGAIEGYIPGSLKMDYDQGTFNIRVRVVNEDASDIEAATTSLARIKIECNHLKTILPESSGTGNPLQPGMTAKQSAE---------PA--LVK-ENVKVTVKYGLYGGRATGKPQKSARDALDG 674 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115324.3188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115324.3188.1 >prot_M-pyrifera_M_contig115324.3188.1 ID=prot_M-pyrifera_M_contig115324.3188.1|Name=mRNA_M-pyrifera_M_contig115324.3188.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp MINAITLFDYKVADEFVAVHEVQYDPESSEKTMFFNFINHNEKAAQFRPEback to top mRNA from alignment at M-pyrifera_M_contig115324:3..566+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115324.3188.1 ID=mRNA_M-pyrifera_M_contig115324.3188.1|Name=mRNA_M-pyrifera_M_contig115324.3188.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig115324:3..566+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115324:3..566+ >mRNA_M-pyrifera_M_contig115324.3188.1 ID=mRNA_M-pyrifera_M_contig115324.3188.1|Name=mRNA_M-pyrifera_M_contig115324.3188.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig115324:3..566+ (Macrocystis pyrifera P11B4 male)back to top |