mRNA_M-pyrifera_M_contig115272.3175.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: A0A7S4IGA2_9EUKA (Solute carrier family 40 protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IGA2_9EUKA) HSP 1 Score: 115 bits (289), Expect = 2.900e-28 Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = 1
Query: 1 LLAETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKGRLAKSGCDDELVADDVRDEGLGGAEHPSAGDGEEEEGVXEKEEPETAEKLSLSQRC----IGFVVQ-VASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAIV 552
LL +TN+VMQRIDLVCKV AP+VLGF+LQV P+ L+ ++ WN+++ +PEL +L +Y + L+K A + EE E +E ET + S++++C IG V++ WV Y H V+LASL++ ML+ T+LAPGGL +YL G+ +W+LG +G++AI+
Sbjct: 35 LLTQTNSVMQRIDLVCKVAAPAVLGFILQVTPLIYVLIGISIWNVVTLVPELYLLIQIYDENQTVLSKK----------------------IAVNSSEESDEDENKEIETDLEDSVTEKCDAGQIGPVLKDTLRGWVVYFTHNVVLASLAFVMLFCTILAPGGLFNAYLNIEGIEDWMLGTMTGIAAII 201
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: A0A7S2Z851_9CHLO (Solute carrier family 40 protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z851_9CHLO) HSP 1 Score: 77.8 bits (190), Expect = 1.450e-13 Identity = 67/190 (35.26%), Postives = 95/190 (50.00%), Query Frame = 1
Query: 1 LLAETNAVMQRIDLVCKVGAPSVLGFLL------QVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKGRLAKSGCDDELVADDVRDEGLGGAEHPSAGDGEEEEGVXEKEEPETAEKLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAIV 552
LL+ N ++QRIDL+CKV AP V+G L +++ + G+L +A +NL + E VL+ VY+ G K ++E ++ E P AGD L + G +V V EYVRH V LASL++CMLY+TVL G L+TSYL V +LG G+ A+V
Sbjct: 54 LLSRVNVLLQRIDLMCKVLAPGVIGLFLDLFHGDRLSSSFLGVLVLALFNLFAWPIEYSVLREVYSGSPGLQRKRILNEEAFYKNL-------VEAPEAGDA----------------VLKDAGEKGGALVAVK----EYVRHPVFLASLAFCMLYMTVLDGGTLITSYLTWRDVDASLLGAQRGLGAVV 216
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: UPI00053F66DB (LOW QUALITY PROTEIN: solute carrier family 40 member 1-like n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F66DB) HSP 1 Score: 77.4 bits (189), Expect = 2.600e-13 Identity = 58/185 (31.35%), Postives = 95/185 (51.35%), Query Frame = 1
Query: 1 LLAETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKGRLAKSGCDDELVADDVRDEGLGGAEH-PSAGDGEEEEGVXEKEEPETAEKLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAIV 552
+L + N+V++RIDLVCK+GAP V GFL+ + A + +A WN++S + +L SVY K D++ + + EH PS E+ + ++ + S C+ + AW Y+ V+L L+ +LY TVL+ G LMT+ L G+ +++G+ G+SAIV
Sbjct: 167 VLTKLNSVLRRIDLVCKLGAPVVSGFLISFVSLTASAIFLAVWNIISVCLQYWLLSSVYRGVPALRMK----------DIKRKEISSHEHEPSTFVTEQNASLPFEDRSNNSSAGSQKLGCLP-IFPCFGAWKVYLNQEVVLPGLALALLYFTVLSFGSLMTASLEWQGIPAYVIGIARGISAIV 340
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: A0A6A5BMS4_NAEFO (Solute carrier family 40 protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BMS4_NAEFO) HSP 1 Score: 77.0 bits (188), Expect = 3.830e-13 Identity = 60/182 (32.97%), Postives = 101/182 (55.49%), Query Frame = 1
Query: 4 LAETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKGRLAKSGCDDELVADDVRDEGLGGAEHPSAGDGEEEEGVXEKEEPETAEKLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAI 549
L + N++M+R+D++ + +P + G ++ A G + V AWN++S PE + VY AE L S + E + R+ L + D E+ + +KEEP T ++L + I V+ W Y++ +VLL+SL++ +L++TVL GGL+ SYL S V + +LGV+ +SAI
Sbjct: 317 LEKINSMMRRLDMISLIMSPVIFGLIVTFAGYKVGTIIVCAWNVISLFPEYFFIYKVY-AETKDLHISKLEQERKIKEERERELAAQ---NTEDMEQIDLEQKKEEPPT---VNLKHQNIFKVLY--HGWKLYIQQKVLLSSLAFVLLFITVLTHGGLLLSYLKSHNVHSAVLGVFQALSAI 489
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: UPI001CFE561B (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFE561B) HSP 1 Score: 75.5 bits (184), Expect = 1.310e-12 Identity = 57/183 (31.15%), Postives = 100/183 (54.64%), Query Frame = 1
Query: 4 LAETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKG-RLAKSGCDDELVADDVRDEGLGGAEHPSAGDGEEEEGVXEKEEPETAEKLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAI 549
L + N++M+R+D+V + +P G ++ A G + V AWN++S LPE + VY ++K + + A+ R E SA + EE E + +++ E ++L + I V+ W Y++ +VLL+SL++ +L++TVL GGL+ SYL S + + +LGV+ +SAI
Sbjct: 327 LEKINSMMRRLDMVSLIVSPVFFGLIVTFAGYKVGAIIVCAWNVISLLPEYFCIYKVYNETTDLHISKYEQEQKFKAERER-------ELESAQNTEEMEQIDLEQKKEEPPTVNLKHQNIFKVLY--KGWKLYIQQKVLLSSLAFVLLFITVLTHGGLLLSYLKSHNIHSAVLGVFQALSAI 500
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: A0A4D9BLL8_SALSN (Solute carrier family 40 protein n=5 Tax=Salvia TaxID=21880 RepID=A0A4D9BLL8_SALSN) HSP 1 Score: 73.6 bits (179), Expect = 5.580e-12 Identity = 59/186 (31.72%), Postives = 99/186 (53.23%), Query Frame = 1
Query: 1 LLAETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKGRLAKSGCDDELVADDVRDEGLGGAEHPSAGDGEEEEGVXEKEE--PETAEKLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAIV 552
+L + N+V++RIDL+CK+ AP + GF++ + A LA+A WN++S ++L SVY KG + V+ V L G S E E + + E++ K ++ ++ + + SAW YV V+L L+ +LY TVL+ G LMT+ L G+ +++G+ G+SA+V
Sbjct: 164 VLTKMNSVIRRIDLICKLFAPVLTGFVISFVSLTASALALAIWNIVSVFLIYILLMSVY---KGIPRLRDVSERRVS--VASRSLVGEVDESVSTSHERESLITSDANYSESSPKGTMIEKFLS--LPYVSAWRVYVNQDVILPGLALALLYFTVLSFGTLMTAALEWQGIPAYVIGIARGISAMV 342
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: A0A822Z7D4_NELNU (Solute carrier family 40 protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822Z7D4_NELNU) HSP 1 Score: 73.2 bits (178), Expect = 8.140e-12 Identity = 54/186 (29.03%), Postives = 97/186 (52.15%), Query Frame = 1
Query: 10 ETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTA-------EKGRLAKSGCDDELVADDVRDEGLGGAEHPSAGDGEEEEGVXEKEEPETAEKLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSA 546
+ NAV++RIDL+CK+ AP + GF++ + A + +A WN +S + +L SVY + R+ + +D L + +G ++ D EE G +K + ++ L +CI AW+ Y++ ++L ++ +LY TVL+ G LMT+ L +G+ +++G+ GVSA
Sbjct: 166 KMNAVIRRIDLICKLFAPVISGFIISFISLKASAVTLALWNTVSVWLQFWLLMSVYNGIPSLSERSQKRITRPRPNDPLEDPSISQKG-------NSKDDEESSGAEQKGNSKLVNRI-LPMQCI-------EAWIVYLKQDIVLPGVALALLYFTVLSFGRLMTAALKWMGMPAYVIGIARGVSA 336
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: A7RY83_NEMVE (Solute carrier family 40 protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RY83_NEMVE) HSP 1 Score: 70.9 bits (172), Expect = 4.890e-11 Identity = 60/196 (30.61%), Postives = 98/196 (50.00%), Query Frame = 1
Query: 1 LLAETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKGRLAKSGCDDELVADD----VRDEGLGGAEH-----PSAGDGE---EEEGVXEKEEPETAE-KLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAI 549
LLA TNA+M+RIDLVCK+ AP+++G ++ AG++ +A+WN+LS E +L VY + LA D +L + ++E G + GD E G + P+T+ K + QR + S W Y+R V ++ +LY TV++ G + T YL + ++ +L + GV A+
Sbjct: 126 LLAGTNAIMRRIDLVCKILAPALVGQVMTYVSKSAGVILIASWNVLSVFVEYFMLLRVYHSVPS-LAHKKIDKKLTQQENPQESQEEIRGSRDRLVFMETEGGDSEALVSRPGSALPQSPQTSRPKPGIIQRLKTRITTTKSVWQVYMRQEVARPGVALAILYFTVISFGSVTTGYLYTQNLSESLLSILRGVGAL 320
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: UPI00138FC7FF (solute carrier family 40 member 1 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC7FF) HSP 1 Score: 70.9 bits (172), Expect = 5.280e-11 Identity = 60/196 (30.61%), Postives = 98/196 (50.00%), Query Frame = 1
Query: 1 LLAETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKGRLAKSGCDDELVADD----VRDEGLGGAEH-----PSAGDGE---EEEGVXEKEEPETAE-KLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAI 549
LLA TNA+M+RIDLVCK+ AP+++G ++ AG++ +A+WN+LS E +L VY + LA D +L + ++E G + GD E G + P+T+ K + QR + S W Y+R V ++ +LY TV++ G + T YL + ++ +L + GV A+
Sbjct: 171 LLAGTNAIMRRIDLVCKILAPALVGQVMTYVSKSAGVILIASWNVLSVFVEYFMLLRVYHSVPS-LAHKKIDKKLTQQENPQESQEEIRGSRDRLVFMETEGGDSEALVSRPGSALPQSPQTSRPKPGIIQRLKTRITTTKSVWQVYMRQEVARPGVALAILYFTVISFGSVTTGYLYTQNLSESLLSILRGVGAL 365
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Match: A0A803MB80_CHEQI (Solute carrier family 40 protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MB80_CHEQI) HSP 1 Score: 70.5 bits (171), Expect = 6.530e-11 Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 1
Query: 1 LLAETNAVMQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVYTAEKGRLAKSGCDDELVADDVRDEGLGGAEHPSAGDGEEEEGVXEKEEPETAEKLSLSQRCIGFVVQVASAWVEYVRHRVLLASLSYCMLYLTVLAPGGLMTSYLVSVGVANWILGVYSGVSAIV 552
+LA+ N+V++RIDLVCK+ AP V GF++ + A + +A WN++S E +L SVY G + D R + PS E+ + + + + + C ++ AW Y+ V+L LS +L+ TVL+ G LMT+ L G+ + +G+ G+SAIV
Sbjct: 165 VLAKLNSVLRRIDLVCKLCAPVVSGFIVSFVSLTASAIFLALWNVVSVCVEYWLLSSVY---------EGIPALRLKDSNRKQNPSSDPEPSKSISEQNSDLPIENKNNIPSPETHAFGCFS-ILPCLGAWKVYLNQEVVLPGLSLALLFFTVLSFGSLMTAVLEWEGIPAYQIGIARGISAIV 338 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115272.3175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115272.3175.1 >prot_M-pyrifera_M_contig115272.3175.1 ID=prot_M-pyrifera_M_contig115272.3175.1|Name=mRNA_M-pyrifera_M_contig115272.3175.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp MQRIDLVCKVGAPSVLGFLLQVAPVWAGLLAVAAWNLLSGLPELLVLQSVback to top mRNA from alignment at M-pyrifera_M_contig115272:16..567+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115272.3175.1 ID=mRNA_M-pyrifera_M_contig115272.3175.1|Name=mRNA_M-pyrifera_M_contig115272.3175.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig115272:16..567+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115272:16..567+ >mRNA_M-pyrifera_M_contig115272.3175.1 ID=mRNA_M-pyrifera_M_contig115272.3175.1|Name=mRNA_M-pyrifera_M_contig115272.3175.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig115272:16..567+ (Macrocystis pyrifera P11B4 male)back to top |