prot_M-pyrifera_M_contig115180.3162.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115180.3162.1
Unique Nameprot_M-pyrifera_M_contig115180.3162.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig115180.3162.1 vs. uniprot
Match: UPI001CCD4F41 (hypothetical protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCD4F41)

HSP 1 Score: 191 bits (485), Expect = 3.910e-59
Identity = 88/110 (80.00%), Postives = 97/110 (88.18%), Query Frame = 0 
Query:    2 KAREAVVGGWIFNRRPRPNPDSCPDGSCNPDLPPAPIEGENNAPPEEEPAKEPPPAKASTPLADLVISIFGDRAKPWVNGFNPAETLIAGGIVGGAVWWKRRKNRKAGKT 111
            K RE  VGGW+FNRRPRPNP+ CP  +CNPDLPPAPIEGENNAPPE+EPAKE PPAK+STP ADL ISIFG+RAKPWVNGFNPAET+IAGG+VG A WWKRRKNRK  K+
Sbjct:  151 KVREHRVGGWLFNRRPRPNPNVCPGPNCNPDLPPAPIEGENNAPPEDEPAKETPPAKSSTPWADLAISIFGERAKPWVNGFNPAETVIAGGLVGAAFWWKRRKNRKTPKS 260
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115180.3162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001CCD4F413.910e-5980.00hypothetical protein n=1 Tax=Bremerella volcania T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 78..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115180contigM-pyrifera_M_contig115180:232..567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115180.3162.1mRNA_M-pyrifera_M_contig115180.3162.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115180 232..567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115180.3162.1 ID=prot_M-pyrifera_M_contig115180.3162.1|Name=mRNA_M-pyrifera_M_contig115180.3162.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
RKAREAVVGGWIFNRRPRPNPDSCPDGSCNPDLPPAPIEGENNAPPEEEP
AKEPPPAKASTPLADLVISIFGDRAKPWVNGFNPAETLIAGGIVGGAVWW
KRRKNRKAGKT*
back to top