mRNA_M-pyrifera_M_contig115176.3159.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: A0A3B8WV69_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3B8WV69_9GAMM) HSP 1 Score: 253 bits (645), Expect = 2.900e-78 Identity = 126/193 (65.28%), Postives = 144/193 (74.61%), Query Frame = 1
Query: 1 TSENSVYSVEETPTGPVVRTFVSPS---------TPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDLTNVAPPECVGPRSDWMTFNTKTNRWVRACSAQRDFN 552
TSEN V S+EET GP +R+F S T KN APTT LNSPDNLA+DSLGNIY+IED+PN+ TVG GDVWFARD DNDGVAES+DHFLSLQV SEATGMIF+P D TKF +AVQHP +T+L DADNDG+RD+DGFGDA+WEFDL + PP C PR W T+N T RWVRACS RD+N
Sbjct: 373 TSENGVISIEETRHGPYIRSFASEDGAPTGAQSGTAKNADLAPTTGTLNSPDNLAIDSLGNIYIIEDAPNSNTVG---GDVWFARDMDNDGVAESLDHFLSLQVAGSEATGMIFNPADPTKFVVAVQHPTTTDLSDADNDGIRDADGFGDAVWEFDLADTVPPVCSKPRHQWTTYNHATRRWVRACSNARDYN 562
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: A0A2E0YW40_9GAMM (Uncharacterized protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YW40_9GAMM) HSP 1 Score: 179 bits (455), Expect = 7.160e-51 Identity = 97/150 (64.67%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 1 TSENSVYSVE-ETPTGPVVRTFVSPS-TPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDL 444
TSEN++YSVE VR F S + TPKN GF PTTA L++PDNLA D+LGNIY+IED+PNTT +GA+GGDVWFARDT+NDGVAES+DH LSL VNQSEATGMIF+PV T+FAIAVQHPAST+L + DG GDA+W ++
Sbjct: 336 TSENTIYSVEMRGQKKATVRIFASDANTPKNDGFDPTTASLDAPDNLAQDALGNIYIIEDNPNTTQIGANGGDVWFARDTNNDGVAESVDHMLSLGVNQSEATGMIFNPVKPTEFAIAVQHPASTDLFNV-------PDGLGDAVWNVEI 478
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: A0A3D3NZA4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3D3NZA4_9BACT) HSP 1 Score: 169 bits (429), Expect = 1.560e-50 Identity = 92/159 (57.86%), Postives = 114/159 (71.70%), Query Frame = 1
Query: 1 TSENSVYSVEETPTGPV-------VRTFVSPSTPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDLTNVA 456
TSEN+V S+E G VRTF+S +TPKN GF TT ++SPDNLALD+ GNIYVIEDSPN+ ++G GD+WFARDTDNDGVAES DHF++L + SEATGMIF+P T+F +AVQHPAST+L N GFGDA+W FD++NV+
Sbjct: 10 TSENAVISIEILTPGTTKVNGTAFVRTFISRATPKNAGFDGTTGQIDSPDNLALDAAGNIYVIEDSPNSGSIG---GDIWFARDTDNDGVAESADHFMTLGIPTSEATGMIFNPTRPTEFWVAVQHPASTDLNAVPN-------GFGDAVWVFDVSNVS 158
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: A0A7C2JUZ6_9GAMM (DUF839 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2JUZ6_9GAMM) HSP 1 Score: 177 bits (449), Expect = 7.540e-50 Identity = 97/185 (52.43%), Postives = 123/185 (66.49%), Query Frame = 1
Query: 1 TSENSVYSVEE-TPTGPVVRTFVSPS-TPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDLTNVAPPECVGPRSDWMTFNTKTNRWVRACSAQRDF 549
TSEN++YS+E +PT +VR S + TPKNLGF TT LNSPDNLA D+LGNIYV+ED+PN VG GD+WF RDTD DGVAES+DHF+S+QV+ +EATGMIF+PV T+F + V HP S + DGFGDA+W FDL N+APP C R+ W R+ + C+ D+
Sbjct: 335 TSENAIYSIELLSPTKAIVRVAASEANTPKNLGFPATTGRLNSPDNLAQDALGNIYVVEDAPNGQDVG---GDIWFMRDTDGDGVAESLDHFMSIQVDGAEATGMIFNPVKPTQFVVTVMHPDSVTI----------PDGFGDAVWTFDLENIAPPVC--DRNGW--------RYTQTCTHAGDY 496
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: UPI00140DBAB1 (DUF839 domain-containing protein n=1 Tax=Pseudomaricurvus alcaniphilus TaxID=1166482 RepID=UPI00140DBAB1) HSP 1 Score: 173 bits (439), Expect = 1.970e-48 Identity = 98/187 (52.41%), Postives = 126/187 (67.38%), Query Frame = 1
Query: 1 TSENSVYSVEETPTG-PVVRTFVSPS-TPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDLTNVAPPECVG-PRSDWMTFNTKTNRWVRACSAQRDFN 552
TSEN+VYSVE + VVR F S + TPKNLGF TT +NSPDNLA D+ GNIY+IED+PN VG GD+WF RD DNDGVAES+DHF+S+QV+ +EATGMIF+P T+F ++VQHP ST++ + G GDA+W FDL V PP C G R + +++ ++ CS+ RDFN
Sbjct: 327 TSENTVYSVEMLNSKRAVVREFASEANTPKNLGFPATTGVINSPDNLAQDAFGNIYIIEDAPNGGDVG---GDIWFVRDADNDGVAESVDHFMSIQVDGAEATGMIFNPAHPTRFVVSVQHPDSTDIEAV-------AGGQGDALWMFDLAEVIPPTCEGGDRYNKYSYDNNVG-YIFTCSSTRDFN 502
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: UPI0006990690 (DUF839 domain-containing protein n=1 Tax=Methylocucumis oryzae TaxID=1632867 RepID=UPI0006990690) HSP 1 Score: 172 bits (437), Expect = 3.610e-48 Identity = 93/159 (58.49%), Postives = 115/159 (72.33%), Query Frame = 1
Query: 1 TSENSVYSVEETPTGPV-VRTFVS-PSTPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDLTNVAPPECV 471
TSE ++Y+VE VR F + +TPKNL + TTA LNSPDNLA D+LGNIY+IED+PN++TVG GD+WF RD +NDG AESIDHF+S+QVN SEATGMIF+P T+F ++VQHP+ST+L A GFGDA+W FDL NV PP CV
Sbjct: 337 TSEAAIYAVEILDDSKATVRIFANNTNTPKNLNYPATTAVLNSPDNLAQDALGNIYIIEDAPNSSTVG---GDIWFIRDVNNDGTAESIDHFMSIQVNGSEATGMIFNPAKPTQFVVSVQHPSSTDLAIAPT-------GFGDAVWLFDLENVVPPTCV 485
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: A0A5C9A5E8_9GAMM (DUF839 domain-containing protein n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A5E8_9GAMM) HSP 1 Score: 171 bits (433), Expect = 1.620e-47 Identity = 92/173 (53.18%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 1 TSENSVYSVEETPTGP---VVRTFVSPS-TPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDLTNVAPPECVGPRSDWMTFNTK 507
TSE++VYSVE P VR F S S TPKN+GF PTT +NSPDNLA D LGNIY+IED+PN +VG GD+WF RD D DGVAES+DHFLS+QV+ +EATGM+F+P T+F AVQHP +T +DG GDA+W+FD++ V PP C R + ++ N +
Sbjct: 335 TSESAVYSVEMDPNNKNVATVRVFASESDTPKNVGFLPTTGVINSPDNLAQDGLGNIYIIEDAPNGGSVG---GDIWFVRDADGDGVAESVDHFLSIQVDGAEATGMVFNPAKPTEFVAAVQHPDTTGS----------TDGTGDALWKFDISGVVPPTCEDGRYNEVSVNNE 494
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: A0A3D3LAU5_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3D3LAU5_9BACT) HSP 1 Score: 169 bits (429), Expect = 4.730e-47 Identity = 92/159 (57.86%), Postives = 114/159 (71.70%), Query Frame = 1
Query: 1 TSENSVYSVEETPTGP-------VVRTFVSPSTPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDLTNVA 456
TSEN+V S+E G VRTF+S +TPKN GF TT ++SPDNLALD+ GNIYVIEDSPN+ ++G GD+WFARDTDNDGVAES DHF++L + SEATGMIF+P T+F +AVQHPAST+L N GFGDA+W FD++NV+
Sbjct: 334 TSENAVISIEILTPGTSRANGTAFVRTFISRATPKNAGFDGTTGQIDSPDNLALDAAGNIYVIEDSPNSGSIG---GDIWFARDTDNDGVAESADHFMTLGIPSSEATGMIFNPTRPTEFWVAVQHPASTDLNAVPN-------GFGDAVWVFDVSNVS 482
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: A0A1E2UPV8_9GAMM (Uncharacterized protein n=2 Tax=Candidatus Thiodiazotropha endoloripes TaxID=1818881 RepID=A0A1E2UPV8_9GAMM) HSP 1 Score: 159 bits (402), Expect = 9.720e-47 Identity = 83/133 (62.41%), Postives = 101/133 (75.94%), Query Frame = 1
Query: 49 VVRTFVSPS-TPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDL 444
+VR FV+ TPKN GFAPT LNSPDNLA D+LGNIY+IED+PN++T G GD+WFARD +NDGVAESIDHF+S++VN SEATGMIF+P T+F +AVQHP STNL DG GDA+W+F+L
Sbjct: 8 MVREFVNGDVTPKNDGFAPTAGMLNSPDNLAQDALGNIYIIEDAPNSSTTG---GDIWFARDKNNDGVAESIDHFMSIRVNGSEATGMIFNPAKPTEFVVAVQHPESTNLDTT-------LDGLGDAVWQFNL 130
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Match: A0A3B1BPZ0_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1BPZ0_9ZZZZ) HSP 1 Score: 166 bits (420), Expect = 6.540e-46 Identity = 96/191 (50.26%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 1 TSENSVYSVEETPTGP-VVRTFVSPSTPKNLGFAPTTAGLNSPDNLALDSLGNIYVIEDSPNTTTVGADGGDVWFARDTDNDGVAESIDHFLSLQVNQSEATGMIFHPVDGTKFAIAVQHPASTNLGDADNDGVRDSDGFGDAIWEFDLTNVAPPECVGPRSDWMTFNTKTNRW------VRACSAQRDFN 552
TSE+ VYS+EE G VVR + +TP+NLG+APTTA L+SPDNLA D+LGNIY++ED P+ G D VWF RDT+ DGVAESIDHF+SLQV +E+TGMIF+PV T+F I VQHP ST + + G GDA W +DLTNV P C+ + + +R+ VR CS D N
Sbjct: 291 TSEHVVYSIEELGNGKAVVREAANRATPRNLGYAPTTAVLDSPDNLAQDALGNIYIVEDKPDPMVAGDD---VWFLRDTNGDGVAESIDHFMSLQVKGAESTGMIFNPVKPTQFIINVQHPESTGV----------AGGQGDATWMYDLTNVVAPPCIRDEDERGDEDRGMHRFGNKQAKVRTCSKSDDTN 468 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115176.3159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115176.3159.1 >prot_M-pyrifera_M_contig115176.3159.1 ID=prot_M-pyrifera_M_contig115176.3159.1|Name=mRNA_M-pyrifera_M_contig115176.3159.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp TSENSVYSVEETPTGPVVRTFVSPSTPKNLGFAPTTAGLNSPDNLALDSLback to top mRNA from alignment at M-pyrifera_M_contig115176:2..553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115176.3159.1 ID=mRNA_M-pyrifera_M_contig115176.3159.1|Name=mRNA_M-pyrifera_M_contig115176.3159.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig115176:2..553+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115176:2..553+ >mRNA_M-pyrifera_M_contig115176.3159.1 ID=mRNA_M-pyrifera_M_contig115176.3159.1|Name=mRNA_M-pyrifera_M_contig115176.3159.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig115176:2..553+ (Macrocystis pyrifera P11B4 male)back to top |