mRNA_M-pyrifera_M_contig115155.3154.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig115155.3154.1
Unique NamemRNA_M-pyrifera_M_contig115155.3154.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: K3X4T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4T5_GLOUD)

HSP 1 Score: 258 bits (660), Expect = 1.840e-81
Identity = 122/188 (64.89%), Postives = 148/188 (78.72%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGVEQHRIIFTDVA 564
            EHF DI  +++GDAARLIHS GIHIL+NLNGYTKGARNEIFAL+PAPVQV+YMGFCGT+G+    Y+V D+TV+P + R  ++EKII +PHSYFVNDH+QSAR+VL       R+ YG+PE  F+F NFNQ+YKIDP+TF  W  IL+R PNS LWLLRFPP  EA IR  A A G++ HR+ FTDVA
Sbjct:  147 EHFKDISMISNGDAARLIHSDGIHILINLNGYTKGARNEIFALKPAPVQVSYMGFCGTLGADYIQYMVGDATVVPKEHRRYFSEKIIHMPHSYFVNDHKQSARDVLDVEKCPTRAHYGVPEDKFVFCNFNQVYKIDPQTFTTWMNILKRVPNSILWLLRFPPIAEANIRAEAKARGIKSHRLHFTDVA 334
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: A0A2P4Y2W6_9STRA (UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2W6_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.190e-80
Identity = 125/189 (66.14%), Postives = 148/189 (78.31%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGV-EQHRIIFTDVA 564
            EHF DI  L++GDAAR I+  GIHILVNLNGYTKGARNEIFAL+PAPVQV+YMGFCGT+G+    Y+V D+TV+PP+ R  +TEK I++PHSYFVNDH+QSA+EVL T     R+ YG+PE  F+F NFNQ+YKIDP TF  W  IL+R PNS LWLLRFPP  EA IR  A A GV +Q R+IFTDVA
Sbjct:   37 EHFTDICALSNGDAARTIYVDGIHILVNLNGYTKGARNEIFALQPAPVQVSYMGFCGTLGADYIQYMVGDATVVPPEYRRFFTEKQINMPHSYFVNDHKQSAQEVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVA 225
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: A0A0W8DU52_PHYNI (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DU52_PHYNI)

HSP 1 Score: 259 bits (661), Expect = 1.740e-77
Identity = 127/189 (67.20%), Postives = 150/189 (79.37%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGV-EQHRIIFTDVA 564
            EHFVDI  L++GDAAR IH+ GIHILVNLNGYTKGARNEIFAL+PAPVQV+YMGFCGT+G+    Y+V D+TV+PP+ R  +TEK I++PHSYFVNDH+QSAR+VL T     R+ YG+PE  F+F NFNQ+YKIDP TF  W  IL+R PNS LWLLRFPP  EA IR  A A GV +Q R+IFTDVA
Sbjct:  618 EHFVDICALSNGDAARTIHADGIHILVNLNGYTKGARNEIFALQPAPVQVSYMGFCGTLGADYIQYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTDKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVA 806
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: D0NXA5_PHYIT (Protein O-GlcNAc transferase n=2 Tax=Phytophthora TaxID=4783 RepID=D0NXA5_PHYIT)

HSP 1 Score: 258 bits (660), Expect = 1.800e-77
Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGV-EQHRIIFTDVA 564
            EHFVDI  L++GDAAR IH+ GIH+LVNLNGYTKGARNEIFAL+PAPVQV+YMGFCGT+G+    Y+V D+TV+PP+ R  +TEK I++PHSYFVNDH+QSAR+VL T     R+ YG+PE  F+F NFNQ+YKIDP TF  W  IL+R PNS LWLLRFPP  EA IR  A A GV +Q R+IFTDVA
Sbjct:  624 EHFVDICALSNGDAARTIHADGIHVLVNLNGYTKGARNEIFALQPAPVQVSYMGFCGTLGADYIHYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVA 812
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: A0A3R7HUL3_9STRA (Protein O-GlcNAc transferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7HUL3_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.770e-77
Identity = 124/189 (65.61%), Postives = 149/189 (78.84%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGV-EQHRIIFTDVA 564
            EHF DI  L++GDAAR IH+ GIH+L+NLNGYTKGARNEIFAL+PAPVQV+YMGFCGT+G+    Y+V D+TV+PP+ R  +TEK I++PHSYFVNDH+QSAR+VL T     R+ YG+PE  F+F NFNQ+YKIDP TF  W  IL+R PNS LWLLRFPP  EA IR  A A GV +Q R+IFTDVA
Sbjct:  560 EHFTDICALSNGDAARTIHADGIHVLINLNGYTKGARNEIFALQPAPVQVSYMGFCGTLGADYIQYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTEKCPSRADYGVPEDKFVFCNFNQVYKIDPLTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVA 748
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: A0A8K1FGH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH6_PYTOL)

HSP 1 Score: 254 bits (650), Expect = 4.210e-76
Identity = 117/188 (62.23%), Postives = 148/188 (78.72%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGVEQHRIIFTDVA 564
            EHF D+  +N+GDAA+LIH+ GIHILVNLNGYTKGARNEIFAL+PAP+QV+YMGFCGT+G+    Y++ D+ V+PP+ R  ++EKII++PHSYFVNDH+QSAR+VL       R+ YG+PE  F+F NFNQ+YKIDP TF  W  +L+R PNS LWLLRFPP  EA +R  A A GV+ +R+ FTDVA
Sbjct:  627 EHFKDVSMMNNGDAAKLIHADGIHILVNLNGYTKGARNEIFALKPAPIQVSYMGFCGTLGADYVQYMIGDAVVVPPEHRRYFSEKIINMPHSYFVNDHKQSARDVLDVEKCPSRAHYGVPEDKFVFCNFNQVYKIDPATFRTWMNVLKRVPNSILWLLRFPPLAEANLRAEARAQGVKDNRLHFTDVA 814
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: M4BYK0_HYAAE (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYK0_HYAAE)

HSP 1 Score: 254 bits (649), Expect = 9.220e-76
Identity = 124/189 (65.61%), Postives = 149/189 (78.84%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGVE-QHRIIFTDVA 564
            EHFVDI  L++GDAAR IH+  IHILVNLNGYTKGARNEIFAL+PAPVQV+YMGFCGT+G+    Y+V D+TV+PP+ R  +TEK I++PHSYFVNDH+QSAR+VL T     R+ YG+PE  F+F NFNQ+YKIDP TF  W  IL+R P+S LWLLRFPP  EA IR  A A G+E Q R++FTDVA
Sbjct:  623 EHFVDICALSNGDAARTIHADDIHILVNLNGYTKGARNEIFALQPAPVQVSYMGFCGTLGADYIQYMVGDATVVPPEYRRFFTEKQINMPHSYFVNDHKQSARDVLDTSKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPDSVLWLLRFPPIAEANIRAEARARGIEDQTRLVFTDVA 811
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: A0A5D6YC07_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC07_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.320e-75
Identity = 117/175 (66.86%), Postives = 138/175 (78.86%), Query Frame = 1 
Query:   40 AARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGVEQHRIIFTDVA 564
            AAR IH  GIH+LVNLNGYTKGARN+IFALRPAP+QV+YMGFCGT+G+    Y+V D+ V+PP  R  +TEKIIS+PHSYFVNDHRQSAR+VL       R+ YG+PE AF+F NFNQ+YKIDP TFA W  IL+R P++ LWLLRFPP  EA IR  AAA GV+ HR+ FTDVA
Sbjct:  149 AARRIHRDGIHVLVNLNGYTKGARNKIFALRPAPLQVSYMGFCGTLGADYVQYMVGDAVVVPPAHRRFFTEKIISMPHSYFVNDHRQSARDVLDAAKCPTRAHYGVPEDAFVFCNFNQVYKIDPATFATWMNILKRVPSAILWLLRFPPLAEANIRAEAAARGVKAHRLHFTDVA 323
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: A0A5A8DUK4_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUK4_CAFRO)

HSP 1 Score: 255 bits (651), Expect = 2.730e-75
Identity = 123/188 (65.43%), Postives = 139/188 (73.94%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGVEQHRIIFTDVA 564
            EH  D+  LN  D ARLI+SR IH+L+NLNGYTKGARNEIFALRPAPVQV+YMGFCGTMG+   DY V D TV PP L H YTE +  +PHSYFVNDH+QS+R VL       R+ YGLPE   +FANFNQLYKIDP TFA W RIL R P S LWLLRFPP GE  +R AA A G+   R++FTDVA
Sbjct:  666 EHVEDLTPLNFADCARLINSRRIHVLINLNGYTKGARNEIFALRPAPVQVSYMGFCGTMGADCMDYFVVDQTVAPPSLAHHYTETLAYMPHSYFVNDHKQSSRFVLDPATAPPRAKYGLPEGGVVFANFNQLYKIDPVTFAAWARILHRVPGSVLWLLRFPPAGEQHVRRAARALGLTDDRLVFTDVA 853
[Close]
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Match: A0A3M6VVX4_9STRA (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVX4_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.590e-74
Identity = 124/189 (65.61%), Postives = 148/189 (78.31%), Query Frame = 1 
Query:    1 EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQVTYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQSAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRTPNSALWLLRFPPHGEATIRDAAAAFGV-EQHRIIFTDVA 564
            EHF DI TL++GDAAR IH+  IHILVNLNGYTKGARNEIFAL+PAPVQV+YMGFCGT+G+    Y+V D+TV+P + R  +TEK I++PHSYFVNDH+QSAR+VL      +R+ YG+PE  F+F NFNQ+YKIDP TFA W  IL+R  NS LWLLRFPP  E  IR AA A GV +Q R+IFTDVA
Sbjct:  608 EHFTDICTLSNGDAARTIHADNIHILVNLNGYTKGARNEIFALQPAPVQVSYMGFCGTLGADYIQYMVGDATVVPLEYRRFFTEKQINMPHSYFVNDHKQSARDVLDKAKCPKRADYGVPEDKFVFCNFNQVYKIDPVTFATWMNILKRVRNSVLWLLRFPPIAETNIRSAARACGVKDQTRLIFTDVA 796
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115155.3154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3X4T5_GLOUD1.840e-8164.89Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2P4Y2W6_9STRA1.190e-8066.14UDP-N-acetylglucosamine-peptide N-acetylglucosamin... [more]
A0A0W8DU52_PHYNI1.740e-7767.20Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
D0NXA5_PHYIT1.800e-7766.67Protein O-GlcNAc transferase n=2 Tax=Phytophthora ... [more]
A0A3R7HUL3_9STRA3.770e-7765.61Protein O-GlcNAc transferase n=4 Tax=Phytophthora ... [more]
A0A8K1FGH6_PYTOL4.210e-7662.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BYK0_HYAAE9.220e-7665.61Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
A0A5D6YC07_9STRA1.320e-7566.86Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A5A8DUK4_CAFRO2.730e-7565.43Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A3M6VVX4_9STRA1.590e-7465.61Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115155contigM-pyrifera_M_contig115155:3..566 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score259.2
Seed ortholog evalue1.5e-66
Seed eggNOG ortholog4792.ETI33477
KEGG rclassRC00005,RC00059
KEGG koko:K09667
KEGG ReactionR09304,R09676
KEGG Pathwayko00514,ko04931,map00514,map04931
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Glycosyl transferase family 41
EggNOG OGs3Q8CX@4776,COG3914@1,KOG4626@2759
Ec32 ortholog descriptionUDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, family GT41
Ec32 orthologEc-10_004480.1
EC2.4.1.255
COG Functional cat.GOT
CAZyGT41
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko03036
Exons1
Model size564
Cds size564
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815667.8512714-CDS-M-pyrifera_M_contig115155:2..5661622815667.8512714-CDS-M-pyrifera_M_contig115155:2..566Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115155 3..566 +
1692277512.8447256-CDS-M-pyrifera_M_contig115155:2..5661692277512.8447256-CDS-M-pyrifera_M_contig115155:2..566Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115155 3..566 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115155.3154.1prot_M-pyrifera_M_contig115155.3154.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig115155 3..566 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig115155.3154.1

>prot_M-pyrifera_M_contig115155.3154.1 ID=prot_M-pyrifera_M_contig115155.3154.1|Name=mRNA_M-pyrifera_M_contig115155.3154.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp
EHFVDIHTLNHGDAARLIHSRGIHILVNLNGYTKGARNEIFALRPAPVQV
TYMGFCGTMGSSAHDYLVADSTVIPPQLRHEYTEKIISLPHSYFVNDHRQ
SAREVLTTHPGMRRSAYGLPERAFLFANFNQLYKIDPRTFACWCRILRRT
PNSALWLLRFPPHGEATIRDAAAAFGVEQHRIIFTDVA
back to top

mRNA from alignment at M-pyrifera_M_contig115155:3..566+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig115155.3154.1 ID=mRNA_M-pyrifera_M_contig115155.3154.1|Name=mRNA_M-pyrifera_M_contig115155.3154.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig115155:3..566+ (Macrocystis pyrifera P11B4 male)
GAACATTTCGTGGATATCCACACGTTGAACCATGGTGACGCTGCACGATT
GATCCACTCCCGTGGTATTCACATTCTCGTGAACTTGAATGGGTACACGA
AAGGTGCTCGGAATGAAATCTTTGCACTTCGTCCGGCTCCTGTGCAAGTG
ACGTACATGGGCTTTTGTGGTACGATGGGGAGTAGTGCTCATGACTACCT
AGTGGCGGATTCAACCGTCATTCCTCCTCAGCTTCGCCATGAGTACACGG
AGAAGATCATCTCACTGCCGCATTCGTACTTTGTGAATGACCATCGTCAG
TCTGCTCGTGAAGTGTTGACGACACATCCAGGGATGCGTCGCAGCGCTTA
CGGTCTTCCAGAACGTGCGTTTTTGTTTGCCAACTTCAACCAGCTGTATA
AGATTGACCCTCGAACGTTTGCGTGTTGGTGTCGCATCCTTCGTCGCACT
CCGAACTCTGCCTTGTGGCTGCTTCGTTTTCCTCCCCATGGTGAGGCAAC
AATTCGTGATGCTGCTGCAGCGTTTGGAGTGGAGCAGCACCGTATCATTT
TCACTGATGTTGCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig115155:3..566+

>mRNA_M-pyrifera_M_contig115155.3154.1 ID=mRNA_M-pyrifera_M_contig115155.3154.1|Name=mRNA_M-pyrifera_M_contig115155.3154.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig115155:3..566+ (Macrocystis pyrifera P11B4 male)
GAACATTTCGTGGATATCCACACGTTGAACCATGGTGACGCTGCACGATT
GATCCACTCCCGTGGTATTCACATTCTCGTGAACTTGAATGGGTACACGA
AAGGTGCTCGGAATGAAATCTTTGCACTTCGTCCGGCTCCTGTGCAAGTG
ACGTACATGGGCTTTTGTGGTACGATGGGGAGTAGTGCTCATGACTACCT
AGTGGCGGATTCAACCGTCATTCCTCCTCAGCTTCGCCATGAGTACACGG
AGAAGATCATCTCACTGCCGCATTCGTACTTTGTGAATGACCATCGTCAG
TCTGCTCGTGAAGTGTTGACGACACATCCAGGGATGCGTCGCAGCGCTTA
CGGTCTTCCAGAACGTGCGTTTTTGTTTGCCAACTTCAACCAGCTGTATA
AGATTGACCCTCGAACGTTTGCGTGTTGGTGTCGCATCCTTCGTCGCACT
CCGAACTCTGCCTTGTGGCTGCTTCGTTTTCCTCCCCATGGTGAGGCAAC
AATTCGTGATGCTGCTGCAGCGTTTGGAGTGGAGCAGCACCGTATCATTT
TCACTGATGTTGCTGAACATTTCGTGGATATCCACACGTTGAACCATGGT
GACGCTGCACGATTGATCCACTCCCGTGGTATTCACATTCTCGTGAACTT
GAATGGGTACACGAAAGGTGCTCGGAATGAAATCTTTGCACTTCGTCCGG
CTCCTGTGCAAGTGACGTACATGGGCTTTTGTGGTACGATGGGGAGTAGT
GCTCATGACTACCTAGTGGCGGATTCAACCGTCATTCCTCCTCAGCTTCG
CCATGAGTACACGGAGAAGATCATCTCACTGCCGCATTCGTACTTTGTGA
ATGACCATCGTCAGTCTGCTCGTGAAGTGTTGACGACACATCCAGGGATG
CGTCGCAGCGCTTACGGTCTTCCAGAACGTGCGTTTTTGTTTGCCAACTT
CAACCAGCTGTATAAGATTGACCCTCGAACGTTTGCGTGTTGGTGTCGCA
TCCTTCGTCGCACTCCGAACTCTGCCTTGTGGCTGCTTCGTTTTCCTCCC
CATGGTGAGGCAACAATTCGTGATGCTGCTGCAGCGTTTGGAGTGGAGCA
GCACCGTATCATTTTCACTGATGTTGCT
back to top