mRNA_M-pyrifera_M_contig10150.315.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10150.315.1
Unique NamemRNA_M-pyrifera_M_contig10150.315.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 504 bits (1298), Expect = 2.590e-175
Identity = 242/273 (88.64%), Postives = 253/273 (92.67%), Query Frame = 1
Query:    1 VLGMLALSRAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            ++G+LAL  A  KDTKSPN PIPKPECDE+IAVSIRYSS   RLYLES D  TRGGCVTL QIWEHQRG+APLY VD K+GDISDS TGTWLLTEELFVEDGITL+VHGTSAGGDADELRLLSTSDTFINLRAHGGS DFLSTKVFAWDTS N PD +EEDGRSY+SAVSEVITDDSQTCNGRAK NMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNH++FEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG
Sbjct:   10 LVGILALKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 282          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 440 bits (1132), Expect = 1.660e-150
Identity = 207/251 (82.47%), Postives = 230/251 (91.63%), Query Frame = 1
Query:   67 PKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            PKP+CD +IAVS+RY++ S+RLY+ES +G TRGGCVTL QIWE Q   +PLY VDPK+GD+S S TGTWLLTEE++VEDGITLQVHG SAGGDADELRLLSTSDTFI+LRA+GGS DFLSTKVFAWDTS N+PD++E DGRSYISAVSEVITDD QTCNGRAK NMGEARMDIE+SEM YLGYHG+E+YGLTWKVRGFCVDK N E+F+DVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG
Sbjct:    6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 256          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 435 bits (1119), Expect = 1.740e-150
Identity = 206/274 (75.18%), Postives = 241/274 (87.96%), Query Frame = 1
Query:    1 VLGMLALS-RAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            +LG+LA + RA A DT SPN PI KP+CD +IAVSIRY+S++ RLYLES DG TRGGCVTL QIWE++ GKAPLY VDP++G+ S++ TGTWLLTEEL+VEDGITL+V+GT  GGDADELRLLST+DT+INLRAHGGS DF+ TKVF+WDTSTNSPDE+E DGRSYISA+SE+ITD+ +TC G AK  MGEARMDIE+SE+GYLG+  SESYGLTWKVRGFC DKSN  +F++VNVYGN+YDSDIHH  FG+YTYGHQQGDWRRNKMHDNSGYG
Sbjct:   15 LLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYG 288          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 3.210e-147
Identity = 205/274 (74.82%), Postives = 236/274 (86.13%), Query Frame = 1
Query:    1 VLGMLALSR-AVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            +LG+LA +  A A DT SPN PI KP+CD +I VSIRY+  + RLYLES DG TRGGC TL QIWE + GKAPLY VDP +GD+S++ TGTWLLTEEL+VEDGITL+V+GT  GGDADELRLLSTS+T+INLRAHGGS DF+ TKVF+WDTSTNSPDE+E DGRSYISAVSE++TD+ +TC G AK  MGEARMDIE+SE+GYLG+  SESYGLTWKVRGFC DKSN E+F+DVNVYGN+YDSDIHH  FG+YTYGHQQGDWRRNKMHDNSGYG
Sbjct:   16 LLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYG 289          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 6.130e-139
Identity = 193/245 (78.78%), Postives = 220/245 (89.80%), Query Frame = 1
Query:   88 NIAVSIRYSSASSRLYLESED-GSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            +IAVSIRY+ +++RLYLES D G+TRGGCVTL QIWE + GK PLY VDP +G++S S TGTWLLTEEL+VEDGITL+V+G+ AGGDADELRLLST++TFINLRAHGGS DF+STKVF+WDTSTNSPDE+E DGRSYISA+SE+ITD+ +TC G AK  MGEARMDIE SE+GYLGY  SESYGLTWKVRGFC DKSN EVF+DVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYG
Sbjct:   41 DIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 407 bits (1047), Expect = 3.910e-137
Identity = 193/245 (78.78%), Postives = 219/245 (89.39%), Query Frame = 1
Query:   88 NIAVSIRYSSASSRLYLESED-GSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            +IAVSIRY+  ++RLYLES D G+TRGGCVTL QIWE + GK PLY VDP +G++S S TGTWLLTEEL+VEDGITL+V+G+ AGGDADELRLLST++TFINLRAHGGS DF+STKVF+WDTSTNSPDE+E DGRSYISA+SE+ITD+ +TC G AK  MGEARMDIE SE+GYLGY  SESYGLTWKVRGFC DKSN EVF+DVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYG
Sbjct:   41 DIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 6.880e-134
Identity = 195/273 (71.43%), Postives = 220/273 (80.59%), Query Frame = 1
Query:    1 VLGMLALSRAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            ++ +LA   A A +T S N  I KP C  +  VSIRYS++S RLYLES DG TRGGCVTL +IW+   G APLY V P +GD+S S TGTWLLTE+L+VEDGITLQVHGTSAGG+A+ELRLLSTS  FINLRAHGGS DF+STKVFAWDTS N    +    RSYISAVSE+ITD  + C+G+AKK MGEARMDIEDSEM YLGY GSESYGLTWKVRGFC D SN EVF++VNVYGNIYDSDIHHN+FGVYTYGH+QGDWRRNKMH N  YG
Sbjct:   13 IVSLLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYG 285          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 399 bits (1024), Expect = 8.860e-134
Identity = 200/273 (73.26%), Postives = 216/273 (79.12%), Query Frame = 1
Query:    1 VLGMLALSRAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            V+ +LA   A A +T S N  I KP C  +  VSIRYS  S RLYLES DG+TRGGCVTL  IW    G APLY V P +GD+S S+TGTWLLTE L+VEDGITLQVHG SAGG ADELRLLSTS  FINLRAHGGS DF+STKVFAWDTS N    ++  GRSYISAVSEVITD  Q C+GRAKKNMGEARMDIEDSEM YLGY GSESYGLTWKVRG C D SN EVF+ VNVYGNIYDSDIHHN FGVYTYGH+QGDWRRNKMH N+ YG
Sbjct:   10 VMTLLAARGADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYG 282          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 1.740e-129
Identity = 182/256 (71.09%), Postives = 214/256 (83.59%), Query Frame = 1
Query:    1 VLGMLALSR-AVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYG 765
            +LG+LA +  A A DT SPN PI KP+CD +I VSIRY+  + RLYLES DG TRGGC TL Q+WE + GK PLY VDP +GD+S++ TGTWLLTEEL+VEDGITL+V+GT  GGDADELRLLSTSDT+INLRA+GGS DF+ TKVF+WDTSTNSPD  E DGRSYISAVSE++TD+ ++C G AK  MGEARMDIE+SE+GYLG+  SESYGLTWKVRGFC DKSN E+F+DVNVYGN+YDSDIHH  FG+YT G
Sbjct:   16 LLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGNTKRLYLESADGETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDGRSYISAVSEIVTDEDESCEGHAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTDG 271          
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 3.250e-121
Identity = 184/273 (67.40%), Postives = 211/273 (77.29%), Query Frame = 1
Query:   40 DTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRG------KAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLST-------SDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819
            DT SPN PIPKPEC+   AVSIRYS+ + RLYLE+     RGGCVT+ QIWE + G      KAPLY VDP +G+ SD +TGTWLL E+L+VEDGITL+V G  +GG ADELRL ST       + T+INLRAHGGS DF  TKVF WDT+ NS D +E DGRSYISAVSE++ D +QTC G AK  MGEARMDI +SEMGY+G+H SESYGLTWKVRGFC DKSN EVF+ VNVYGNIYDS++HH NF VYTYGHQQGDWRRN +H NSGYG
Sbjct:  102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYG 374          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q7XAJ7_9PHAE2.590e-17588.64Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAJ8_9PHAE1.660e-15082.47Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A0A6H5JU98_9PHAE1.740e-15075.18MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI3.210e-14774.82Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI6.130e-13978.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI3.910e-13778.78Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE6.880e-13471.43Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
A8CEP1_SACJA8.860e-13473.26Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D8LHA2_ECTSI1.740e-12971.09Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LD45_ECTSI3.250e-12167.40Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10150contigM-pyrifera_M_contig10150:6122..10169 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.5
Seed ortholog evalue5.7e-55
Seed eggNOG ortholog2880.D8LC73
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons5
Model size997
Cds size948
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815513.0070958-UTR-M-pyrifera_M_contig10150:6121..61301622815513.0070958-UTR-M-pyrifera_M_contig10150:6121..6130Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10150 6122..6130 +
1692277445.1497235-UTR-M-pyrifera_M_contig10150:6121..61301692277445.1497235-UTR-M-pyrifera_M_contig10150:6121..6130Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10150 6122..6130 +
1622815513.0983996-UTR-M-pyrifera_M_contig10150:10129..101691622815513.0983996-UTR-M-pyrifera_M_contig10150:10129..10169Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10150 10130..10169 +
1692277445.2095888-UTR-M-pyrifera_M_contig10150:10129..101691692277445.2095888-UTR-M-pyrifera_M_contig10150:10129..10169Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10150 10130..10169 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815513.0238528-CDS-M-pyrifera_M_contig10150:6130..64391622815513.0238528-CDS-M-pyrifera_M_contig10150:6130..6439Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 6131..6439 +
1692277445.1703665-CDS-M-pyrifera_M_contig10150:6130..64391692277445.1703665-CDS-M-pyrifera_M_contig10150:6130..6439Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 6131..6439 +
1622815513.041482-CDS-M-pyrifera_M_contig10150:7567..76811622815513.041482-CDS-M-pyrifera_M_contig10150:7567..7681Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 7568..7681 +
1692277445.178544-CDS-M-pyrifera_M_contig10150:7567..76811692277445.178544-CDS-M-pyrifera_M_contig10150:7567..7681Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 7568..7681 +
1622815513.0559232-CDS-M-pyrifera_M_contig10150:8414..86301622815513.0559232-CDS-M-pyrifera_M_contig10150:8414..8630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 8415..8630 +
1692277445.1864765-CDS-M-pyrifera_M_contig10150:8414..86301692277445.1864765-CDS-M-pyrifera_M_contig10150:8414..8630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 8415..8630 +
1622815513.0692642-CDS-M-pyrifera_M_contig10150:9045..92891622815513.0692642-CDS-M-pyrifera_M_contig10150:9045..9289Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 9046..9289 +
1692277445.1940832-CDS-M-pyrifera_M_contig10150:9045..92891692277445.1940832-CDS-M-pyrifera_M_contig10150:9045..9289Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 9046..9289 +
1622815513.0839589-CDS-M-pyrifera_M_contig10150:10064..101291622815513.0839589-CDS-M-pyrifera_M_contig10150:10064..10129Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 10065..10129 +
1692277445.2017822-CDS-M-pyrifera_M_contig10150:10064..101291692277445.2017822-CDS-M-pyrifera_M_contig10150:10064..10129Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10150 10065..10129 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10150.315.1prot_M-pyrifera_M_contig10150.315.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10150 6131..10129 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10150.315.1

>prot_M-pyrifera_M_contig10150.315.1 ID=prot_M-pyrifera_M_contig10150.315.1|Name=mRNA_M-pyrifera_M_contig10150.315.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=316bp
MLALSRAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGST
RGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGI
TLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTN
SPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYL
GYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYT
YGHQQGDWRRNKMHDNSGYXXXXGLRQRVPRHNRLQALQRGVYPGKRGLR
RCFVVCWYIPSPEQR*
back to top

mRNA from alignment at M-pyrifera_M_contig10150:6122..10169+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10150.315.1 ID=mRNA_M-pyrifera_M_contig10150.315.1|Name=mRNA_M-pyrifera_M_contig10150.315.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4048bp|location=Sequence derived from alignment at M-pyrifera_M_contig10150:6122..10169+ (Macrocystis pyrifera P11B4 male)
GTCTTGGGTATGCTCGCGCTCAGTCGGGCTGTCGCCAAAGACACAAAATC ACCGAACCATCCCATCCCCAAGCCGGAGTGCGATGAGAATATCGCTGTCT CAATTCGATACTCGTCTGCTTCTTCGCGGCTGTACCTCGAGTCGGAGGAC GGTAGCACCCGTGGCGGCTGTGTGACGTTGGCACAAATATGGGAGCATCA AAGAGGCAAGGCGCCCTTGTATCCCGTGGATCCCAAGACTGGGGATATCA GTGACAGCGTTACAGGGACATGGCTGCTTACCGAAGAACTGTTCGTAGAG GACGGCATCACGCTACAGGTAGGCTATTTGTTCCATCTGGACGCGGGAAG AGTGGCGAAAACATGTATGCTCTTGTTGCACTACTCGGGTCGACGTGCAC AGTGGAAATTGCAACATTTCTGGGTTTTGTTATCTCGCGCATACGTTTAC GTTATTTCTCTTGACCCGTTGTAATGCATTAGGGGACCGTTGAGCTTGGA AAACAAACATAAGGTTTGTGCGTACAGGCCCGGTGCACTAGGGGACCGGG TGAAAGGTCTAAGCGTACGGGACCTTTGTACTAGGGGGCCGAACGCATGG TTTAGGTGTACGGAGCCGGCACCTACCGGCACCGCATCGATCCTAAGCAG GAAACACTGAAACTCTTGTATCGGGAGAGTTTGTTTTGGCAAGTCTATTA GTACGAAGTCGGCGGAAACTAGATGCCGGCCGAGTTAGATTTCGTACTTA CGAAACTGGAGAACTACTCCTATATGCACGGTTTTCATTGCTGATTTTAG CGAACCCTTCCTTCAGAGCCCTCTCTAAGAGATAGTTTTATTATTCAAGT TCTTCTTGCAATCGATGCGGAATCGACCGACCGCGTTAACAAATTACCAG CATTTCTTATGTTCCCTTACTGTAGACGTTCCCCGGTTTCGTAAGTATGA AATCGAACTCGGCCGCCATCTGGTTTCCACCAACTTCGTATCAATCCACT GCCACTAGCACACGTCCGGTACAAGCACTTCAGTATTTCTTTCTTGTGTT GAAGGACTGATTAGGATCGATGCGGTCCCGATAGGTATCGGCCCCGCCCG CCCAAACGTTACGTTCAGTCCCCTCGTGCACCGGTCCCTTAATGCATTAC ACCGTCCCGTAGGTACGGGACGTTGATAGTATAGTACCTATTGCGGGGAC CATAGTAAACAGGACCAAATATTGTTAGTAAAAGTAGGTAAATATACAGG TTTTTATGTATACCATAGGTCCTANNNNNNNNNNTAGTAACAGTAGGTAA GTTTTCAGGTGTGTATGTATCCCAGAGGTCCTATTAACTATGGACCCCCG TAATAGTATGCCGTGTCTCGTGGTCCGGTCACCCCACAGCTAAAATACTT TTGGAACCCACCCTTCCTTGCTCCTACATGTTTTGTTGGCGTGCAGGTTC ACGGTACCTCGGCAGGTGGCGATGCTGACGAGCTGCGTCTCCTTAGTACG AGCGATACCTTCATCAATCTGCGCGCTCACGGCGGAAGCTTCGATTTCTT GAGCACCAAGGTACACCGTTCACGTCACGGGTCACACCTCGTCTAATAAA AACGAGTAGCATAGAATGACATCTGTTTTTTTTGTAACTGCTGGTTCCTA ACTTAGGGAACTCAATCGGTCAGAAACCTAGCGCCCAAAAAGTGAAACCC CTACCGTGGGGTGGCTCGTCGGCCCAAGACAACACTACCTATTGCATTCT AGCACTGACTTTTGTGCTCATATGAGATGTACGGAATAGCAACAGGGCCA AGTTCTTGAATATTGTTTTCTATTTATTCGTACTTTATATCCCCTGATTA CAGTTTGCTGGGAAATCACCGGACATAAATATCCTTGGGATAGGGCATGG TACCCGGTCGAGGGTGAGGGTCAGTTTCATGATCAAGATTTGAGGGGGAT GGGTTTTGGTAGATGTTCGGGCTGTAACGCGTACCGGAAGTGCGTACGAA GTATGGAATGAAAGTGAGGCCACATGACTTGCTGTGGTTTTATACCTAAA TCATTTCGCATTACATTCATTCCACTTGTTAGAAACTAGATTTTGTATAT ATCTGTTGGAGTGATGATTCCTAGAGAACTCCGACAAAGGACGAATGTCA AATAATCTCCGTCTTCGGCTGTGCTGGCCTCGCAAACACAATCCTTCTTG GACCGTTATTTTGTGCTTTGTGGCGTTGACATCTTGCCGCGGTGTCCTTC AATATTGATCATATTGTGCCTGACCTCAAACCCATATTGTCAGGTGTTTG CGTGGGACACTTCCACAAACAGCCCCGACGAAAACGAAGAAGATGGTCGG TCGTACATCAGCGCCGTCTCCGAGGTGATCACCGACGACAGCCAAACGTG CAATGGCAGAGCCAAGAAGAACATGGGAGAGGCACGCATGGACATCGAAG ACAGTGAGATGGGGTACCTTGGATACCACGGCAGCGAGAGCTATGGCCTA ACGTGGAAGGTAAGACAAGGCACAACGCGGCTTCCCATGCACAAGAACCC AACGATACTTCCTAAACCGACTGGAACAAAGGATACGTGAAATCAGCGGA ATGGTTGTTTGAAGGTCAAGGTCGTTTCACTGGGACTGACTTCAGGGCCG AAGAGATCTTAGTGTTTTGTTGATAGGTAGATTGCATTTGCTTCCCAAGC CCTAACAGCTATCGTCAGTATACTCCGCTATCAGTGCCTACTGAAGGCAA TACACTCCCGAAAACGCCGGACAATCACACGATAACCCTTCGGCACGTTT CCAGGGAACAGGATCATCCGCCAGTTGATATGTTTAAGGTACCCAGCACG CCTAGTTTAGGAACAAACGATTTTGCCCACAACCGTCGTTAACCGTTGAC CTACACTTGGACCCACCTCACCAGGTCCGGGGGTTCTGCGTCGACAAGAG CAACCACGAAGTGTTCGAAGATGTAAACGTCTACGGCAACATCTACGACT CGGACATACACCACAACAACTTCGGAGTCTACACGTACGGCCACCAGCAG GGGGACTGGAGGAGGAACAAGATGCACGACAACTCGGGCTACGGNNNNNN NNNNGGTCTACGACAACGGGTACCACGGCATAATCGCCTCCAAGCGTTGC AACGGGGTGTCTATCCAGGTACGATACGTTCGTCGTCACGTAGTGTGCGA CGCAGTCCATATTTAACAGCGGGGTTGCCGAGTCACCCTCTCCAAGGAAA CACGGTGTTTGGGGGACGATACCCTATACCCACCGTTTAGTCACCACTGG CGAAAACAATACGAGCCTGTTCCAGTTGCAGGGGGAACATTCGGTCTCTG AATATTTGCTTCTAATTTGTTTAGACTCGACAGATGATGTTTGGAATCAT TGATGTTGATGGCAACGAGACAACAACTGAGGTTCGGGCCTAACGGCTCA GGTGACGAATTATAAGTTTCCGACAAGTTTGACCGCAATTGATGCACGGA AAATTAAACAAATAGGTGACCAGCCGATACATTTTCCCTGTCGCCATGAA AAACAAGTAACTTTTGTTTTTGCCCACTTCTCAAATAGAAAGAGGCTAAA AACAGTCCCAAACATGTTTCAGTGTTTCGGTTCTCCCCCTGCTCAAGTAG TCGCAGCATTACTATAGTTCTTCGTTTCCCCAGGAGGTCAGATCCAATTA ACAGAACTTGTCCACTAATGCGTTCCCCTTGTTGAAGCCGCCATGTGGAT AAGTGCATAGCGACGTGATCCAACGTTTTCATAGTTTGAGATCCCGAACG TAAACTGTTGCGCGTTATGCTGGAAGCAGCTTGTACTATGTCATGGTATC CCCTGACCACTCCTCAACCTGTACTTGTCCGAGAGATGAACTACATTTAG CTCATTCTGTCGTATCGCTCACGTGCCAATTTATATCGTCCAGGGAAACG AGGTTTACGGCGGTGCTTCGTCGTCTGCTGGTATATTCCTTCACCGGAGC AGCGATGACGCTGTTGTGAAAGGTAAGCACCTGAAAAGCGAAGGGAAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig10150:6122..10169+

>mRNA_M-pyrifera_M_contig10150.315.1 ID=mRNA_M-pyrifera_M_contig10150.315.1|Name=mRNA_M-pyrifera_M_contig10150.315.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1896bp|location=Sequence derived from alignment at M-pyrifera_M_contig10150:6122..10169+ (Macrocystis pyrifera P11B4 male)
ATGCTCGCGCTCAGTCGGGCTGTCGCCAAAGACACAAAATCACCGAACCA
TCCCATCCCCAAGCCGGAGTGCGATGAGAATATCGCTGTCTCAATTCGAT
ACTCGTCTGCTTCTTCGCGGCTGTACCTCGAGTCGGAGGACGGTAGCACC
CGTGGCGGCTGTGTGACGTTGGCACAAATATGGGAGCATCAAAGAGGCAA
GGCGCCCTTGTATCCCGTGGATCCCAAGACTGGGGATATCAGTGACAGCG
TTACAGGGACATGGCTGCTTACCGAAGAACTGTTCGTAGAGGACGGCATC
ACGCTACAGATGCTCGCGCTCAGTCGGGCTGTCGCCAAAGACACAAAATC
ACCGAACCATCCCATCCCCAAGCCGGAGTGCGATGAGAATATCGCTGTCT
CAATTCGATACTCGTCTGCTTCTTCGCGGCTGTACCTCGAGTCGGAGGAC
GGTAGCACCCGTGGCGGCTGTGTGACGTTGGCACAAATATGGGAGCATCA
AAGAGGCAAGGCGCCCTTGTATCCCGTGGATCCCAAGACTGGGGATATCA
GTGACAGCGTTACAGGGACATGGCTGCTTACCGAAGAACTGTTCGTAGAG
GACGGCATCACGCTACAGGTTCACGGTACCTCGGCAGGTGGCGATGCTGA
CGAGCTGCGTCTCCTTAGTACGAGCGATACCTTCATCAATCTGCGCGCTC
ACGGCGGAAGCTTCGATTTCTTGAGCACCAAGGTTCACGGTACCTCGGCA
GGTGGCGATGCTGACGAGCTGCGTCTCCTTAGTACGAGCGATACCTTCAT
CAATCTGCGCGCTCACGGCGGAAGCTTCGATTTCTTGAGCACCAAGGTGT
TTGCGTGGGACACTTCCACAAACAGCCCCGACGAAAACGAAGAAGATGGT
CGGTCGTACATCAGCGCCGTCTCCGAGGTGATCACCGACGACAGCCAAAC
GTGCAATGGCAGAGCCAAGAAGAACATGGGAGAGGCACGCATGGACATCG
AAGACAGTGAGATGGGGTACCTTGGATACCACGGCAGCGAGAGCTATGGC
CTAACGTGGAAGGTGTTTGCGTGGGACACTTCCACAAACAGCCCCGACGA
AAACGAAGAAGATGGTCGGTCGTACATCAGCGCCGTCTCCGAGGTGATCA
CCGACGACAGCCAAACGTGCAATGGCAGAGCCAAGAAGAACATGGGAGAG
GCACGCATGGACATCGAAGACAGTGAGATGGGGTACCTTGGATACCACGG
CAGCGAGAGCTATGGCCTAACGTGGAAGGTCCGGGGGTTCTGCGTCGACA
AGAGCAACCACGAAGTGTTCGAAGATGTAAACGTCTACGGCAACATCTAC
GACTCGGACATACACCACAACAACTTCGGAGTCTACACGTACGGCCACCA
GCAGGGGGACTGGAGGAGGAACAAGATGCACGACAACTCGGGCTACGGNN
NNNNNNNNGGTCTACGACAACGGGTACCACGGCATAATCGCCTCCAAGCG
TTGCAACGGGGTGTCTATCCAGGTCCGGGGGTTCTGCGTCGACAAGAGCA
ACCACGAAGTGTTCGAAGATGTAAACGTCTACGGCAACATCTACGACTCG
GACATACACCACAACAACTTCGGAGTCTACACGTACGGCCACCAGCAGGG
GGACTGGAGGAGGAACAAGATGCACGACAACTCGGGCTACGGNNNNNNNN
NNGGTCTACGACAACGGGTACCACGGCATAATCGCCTCCAAGCGTTGCAA
CGGGGTGTCTATCCAGGGAAACGAGGTTTACGGCGGTGCTTCGTCGTCTG
CTGGTATATTCCTTCACCGGAGCAGCGATGAGGAAACGAGGTTTACGGCG
GTGCTTCGTCGTCTGCTGGTATATTCCTTCACCGGAGCAGCGATGA
back to top