mRNA_M-pyrifera_M_contig10150.315.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 504 bits (1298), Expect = 2.590e-175 Identity = 242/273 (88.64%), Postives = 253/273 (92.67%), Query Frame = 1 Query: 1 VLGMLALSRAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 ++G+LAL A KDTKSPN PIPKPECDE+IAVSIRYSS RLYLES D TRGGCVTL QIWEHQRG+APLY VD K+GDISDS TGTWLLTEELFVEDGITL+VHGTSAGGDADELRLLSTSDTFINLRAHGGS DFLSTKVFAWDTS N PD +EEDGRSY+SAVSEVITDDSQTCNGRAK NMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNH++FEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG Sbjct: 10 LVGILALKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 282
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 440 bits (1132), Expect = 1.660e-150 Identity = 207/251 (82.47%), Postives = 230/251 (91.63%), Query Frame = 1 Query: 67 PKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 PKP+CD +IAVS+RY++ S+RLY+ES +G TRGGCVTL QIWE Q +PLY VDPK+GD+S S TGTWLLTEE++VEDGITLQVHG SAGGDADELRLLSTSDTFI+LRA+GGS DFLSTKVFAWDTS N+PD++E DGRSYISAVSEVITDD QTCNGRAK NMGEARMDIE+SEM YLGYHG+E+YGLTWKVRGFCVDK N E+F+DVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG Sbjct: 6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 256
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 435 bits (1119), Expect = 1.740e-150 Identity = 206/274 (75.18%), Postives = 241/274 (87.96%), Query Frame = 1 Query: 1 VLGMLALS-RAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 +LG+LA + RA A DT SPN PI KP+CD +IAVSIRY+S++ RLYLES DG TRGGCVTL QIWE++ GKAPLY VDP++G+ S++ TGTWLLTEEL+VEDGITL+V+GT GGDADELRLLST+DT+INLRAHGGS DF+ TKVF+WDTSTNSPDE+E DGRSYISA+SE+ITD+ +TC G AK MGEARMDIE+SE+GYLG+ SESYGLTWKVRGFC DKSN +F++VNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKMHDNSGYG Sbjct: 15 LLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYG 288
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 433 bits (1114), Expect = 3.210e-147 Identity = 205/274 (74.82%), Postives = 236/274 (86.13%), Query Frame = 1 Query: 1 VLGMLALSR-AVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 +LG+LA + A A DT SPN PI KP+CD +I VSIRY+ + RLYLES DG TRGGC TL QIWE + GKAPLY VDP +GD+S++ TGTWLLTEEL+VEDGITL+V+GT GGDADELRLLSTS+T+INLRAHGGS DF+ TKVF+WDTSTNSPDE+E DGRSYISAVSE++TD+ +TC G AK MGEARMDIE+SE+GYLG+ SESYGLTWKVRGFC DKSN E+F+DVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKMHDNSGYG Sbjct: 16 LLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYG 289
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 408 bits (1049), Expect = 6.130e-139 Identity = 193/245 (78.78%), Postives = 220/245 (89.80%), Query Frame = 1 Query: 88 NIAVSIRYSSASSRLYLESED-GSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 +IAVSIRY+ +++RLYLES D G+TRGGCVTL QIWE + GK PLY VDP +G++S S TGTWLLTEEL+VEDGITL+V+G+ AGGDADELRLLST++TFINLRAHGGS DF+STKVF+WDTSTNSPDE+E DGRSYISA+SE+ITD+ +TC G AK MGEARMDIE SE+GYLGY SESYGLTWKVRGFC DKSN EVF+DVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYG Sbjct: 41 DIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 407 bits (1047), Expect = 3.910e-137 Identity = 193/245 (78.78%), Postives = 219/245 (89.39%), Query Frame = 1 Query: 88 NIAVSIRYSSASSRLYLESED-GSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 +IAVSIRY+ ++RLYLES D G+TRGGCVTL QIWE + GK PLY VDP +G++S S TGTWLLTEEL+VEDGITL+V+G+ AGGDADELRLLST++TFINLRAHGGS DF+STKVF+WDTSTNSPDE+E DGRSYISA+SE+ITD+ +TC G AK MGEARMDIE SE+GYLGY SESYGLTWKVRGFC DKSN EVF+DVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYG Sbjct: 41 DIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 399 bits (1025), Expect = 6.880e-134 Identity = 195/273 (71.43%), Postives = 220/273 (80.59%), Query Frame = 1 Query: 1 VLGMLALSRAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 ++ +LA A A +T S N I KP C + VSIRYS++S RLYLES DG TRGGCVTL +IW+ G APLY V P +GD+S S TGTWLLTE+L+VEDGITLQVHGTSAGG+A+ELRLLSTS FINLRAHGGS DF+STKVFAWDTS N + RSYISAVSE+ITD + C+G+AKK MGEARMDIEDSEM YLGY GSESYGLTWKVRGFC D SN EVF++VNVYGNIYDSDIHHN+FGVYTYGH+QGDWRRNKMH N YG Sbjct: 13 IVSLLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYG 285
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 399 bits (1024), Expect = 8.860e-134 Identity = 200/273 (73.26%), Postives = 216/273 (79.12%), Query Frame = 1 Query: 1 VLGMLALSRAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 V+ +LA A A +T S N I KP C + VSIRYS S RLYLES DG+TRGGCVTL IW G APLY V P +GD+S S+TGTWLLTE L+VEDGITLQVHG SAGG ADELRLLSTS FINLRAHGGS DF+STKVFAWDTS N ++ GRSYISAVSEVITD Q C+GRAKKNMGEARMDIEDSEM YLGY GSESYGLTWKVRG C D SN EVF+ VNVYGNIYDSDIHHN FGVYTYGH+QGDWRRNKMH N+ YG Sbjct: 10 VMTLLAARGADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYG 282
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI) HSP 1 Score: 380 bits (975), Expect = 1.740e-129 Identity = 182/256 (71.09%), Postives = 214/256 (83.59%), Query Frame = 1 Query: 1 VLGMLALSR-AVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRGKAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLSTSDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYG 765 +LG+LA + A A DT SPN PI KP+CD +I VSIRY+ + RLYLES DG TRGGC TL Q+WE + GK PLY VDP +GD+S++ TGTWLLTEEL+VEDGITL+V+GT GGDADELRLLSTSDT+INLRA+GGS DF+ TKVF+WDTSTNSPD E DGRSYISAVSE++TD+ ++C G AK MGEARMDIE+SE+GYLG+ SESYGLTWKVRGFC DKSN E+F+DVNVYGN+YDSDIHH FG+YT G Sbjct: 16 LLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGNTKRLYLESADGETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDGRSYISAVSEIVTDEDESCEGHAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTDG 271
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 370 bits (949), Expect = 3.250e-121 Identity = 184/273 (67.40%), Postives = 211/273 (77.29%), Query Frame = 1 Query: 40 DTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTRGGCVTLAQIWEHQRG------KAPLYPVDPKTGDISDSVTGTWLLTEELFVEDGITLQVHGTSAGGDADELRLLST-------SDTFINLRAHGGSFDFLSTKVFAWDTSTNSPDENEEDGRSYISAVSEVITDDSQTCNGRAKKNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHEVFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 819 DT SPN PIPKPEC+ AVSIRYS+ + RLYLE+ RGGCVT+ QIWE + G KAPLY VDP +G+ SD +TGTWLL E+L+VEDGITL+V G +GG ADELRL ST + T+INLRAHGGS DF TKVF WDT+ NS D +E DGRSYISAVSE++ D +QTC G AK MGEARMDI +SEMGY+G+H SESYGLTWKVRGFC DKSN EVF+ VNVYGNIYDS++HH NF VYTYGHQQGDWRRN +H NSGYG Sbjct: 102 DTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYG 374 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10150.315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10150.315.1 >prot_M-pyrifera_M_contig10150.315.1 ID=prot_M-pyrifera_M_contig10150.315.1|Name=mRNA_M-pyrifera_M_contig10150.315.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=316bp MLALSRAVAKDTKSPNHPIPKPECDENIAVSIRYSSASSRLYLESEDGSTback to top mRNA from alignment at M-pyrifera_M_contig10150:6122..10169+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10150.315.1 ID=mRNA_M-pyrifera_M_contig10150.315.1|Name=mRNA_M-pyrifera_M_contig10150.315.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4048bp|location=Sequence derived from alignment at M-pyrifera_M_contig10150:6122..10169+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10150:6122..10169+ >mRNA_M-pyrifera_M_contig10150.315.1 ID=mRNA_M-pyrifera_M_contig10150.315.1|Name=mRNA_M-pyrifera_M_contig10150.315.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1896bp|location=Sequence derived from alignment at M-pyrifera_M_contig10150:6122..10169+ (Macrocystis pyrifera P11B4 male)back to top |