mRNA_M-pyrifera_M_contig115056.3132.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: D7G7Y2_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y2_ECTSI) HSP 1 Score: 222 bits (565), Expect = 6.180e-66 Identity = 107/188 (56.91%), Postives = 142/188 (75.53%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYFVESGAEGLREVV 564
HM IG+P+AWSV+SGT+++ELG+VS+AA DWS+ AT+PMSI FA GL AA GS+ ++VGPR SM+ A FGGG+ +G LG+ H+LPLLY GYG++AG G+GLAYTPP+QTLM WF D+R LASG+ IAGFGSGAL+F+P + L + FS+ P + G D V + +G+ F ++ A GL EVV
Sbjct: 51 HMCIGSPWAWSVMSGTISRELGIVSSAAGDWSMAEATMPMSIVFATLGLAAALGGSWAHKVGPRMSMSAASLCFGGGVMIGGLGVEYHSLPLLYGGYGVLAGTGLGLAYTPPIQTLMGWFPDKRALASGLTIAGFGSGALVFAPLVNTLMEKFSKMPTYLGTMDQVSTVMNEGKLFAQT-ASGLVEVV 237
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A5A8E8W6_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E8W6_CAFRO) HSP 1 Score: 222 bits (566), Expect = 1.970e-65 Identity = 110/188 (58.51%), Postives = 136/188 (72.34%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYFVESGAEGLREVV 564
HM IG PYAWSV+S + +ELGVV+A+A DWSL ATLP+S+ FA G+ AA AG + +GPRASM IA F GGLG+ ALG+ +H+LPLLY GYG++ G G+GL YTPP+QTL+ WF DRRGLASG+ IAGFGSGAL+F+PAA +L F + PEFAG ++ KDG FV LREVV
Sbjct: 120 HMCIGHPYAWSVMSSPLTRELGVVAASAADWSLAQATLPISLVFAAQGVAAAVAGPWLANIGPRASMMIAAACFSGGLGLSALGVAMHSLPLLYLGYGVLGGTGVGLGYTPPIQTLISWFPDRRGLASGVTIAGFGSGALVFAPAAQWLMAKFQQPPEFAGSPSTTALVEKDGLTFVSEAGGKLREVV 307
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A7S1GCY3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCY3_9STRA) HSP 1 Score: 219 bits (558), Expect = 9.100e-65 Identity = 109/188 (57.98%), Postives = 140/188 (74.47%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYFVESGAEGLREVV 564
H+ IG+P+ WSVL+G V +E G V+AAA+DW+ +PMSI FA+ GL AA A S+Q +VG RASMA AG FGGGL +GA+GI H L LLY GYG++AG+G+G AYTPP+Q L+EWF DR+GLASG+ IAGFGSGALLF+PA+++L + FSR PEF G V + ++DGR F E L+EVV
Sbjct: 59 HLCIGSPWGWSVLAGPVGREYGFVTAAAEDWTFAQVAMPMSIVFALQGLSAAAAASWQMKVGARASMATAGACFGGGLVLGAVGIATHQLWLLYLGYGVLAGIGVGTAYTPPVQALIEWFPDRKGLASGLTIAGFGSGALLFAPASTWLANRFSRLPEFVGAASEVTMTSRDGRLFTNVAGE-LKEVV 245
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A835Z4T5_9STRA (Major facilitator transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T5_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.330e-62 Identity = 102/188 (54.26%), Postives = 140/188 (74.47%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYFVESGAEGLREVV 564
HM IGTP+AWSV+S T+++E GV A+A DWS+ AAT+P+S+AFA+ G+ AA GS+ RVGPR +M +AG FGGGL +G GI +H+LPLLYAGYG++AG GIGLAYTPP+Q L+ WF D++GLASG+ IAGFGSGAL+F+P + L F++ P++ G D+V+ G+ + G + REV+
Sbjct: 95 HMCIGTPWAWSVMSSTLSREFGVAGASAADWSITAATMPLSVAFALQGISAALGGSWALRVGPRKAMGLAGLCFGGGLMIGGAGISMHSLPLLYAGYGVLAGTGIGLAYTPPVQALIGWFPDKKGLASGLTIAGFGSGALVFTPMVNNLMAKFAQMPQYLGTADSVDTTVVGGKMLAQVG-DAAREVI 281
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A7S0STR4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STR4_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.160e-58 Identity = 98/188 (52.13%), Postives = 133/188 (70.74%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYFVESGAEGLREVV 564
HM IG+P+AWS+++ +E+G V+ AA DWSL A P+S+ F + G+ A+ G +Q RVGPR +MA A FGGGL +G+ GI+LH+LPLLYAGYG + G GIGLAYTPP+Q LM+WF D++G+ASG+ IAGFGSGAL+F+PA +L F++ P + GP D+ A DG+ F + L EVV
Sbjct: 77 HMCIGSPWAWSIMADVATREIGFVAPAAADWSLMQAAFPLSMVFLLQGVSASIVGKWQARVGPRKAMAAASIAFGGGLLIGSAGIYLHSLPLLYAGYGFLGGTGIGLAYTPPVQALMQWFPDKKGIASGLTIAGFGSGALIFTPAVQYLMKKFAKLPTYLGPIDSYTTTAIDGKLFANVSGQ-LIEVV 263
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A482RPS1_9ARCH (MFS transporter (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPS1_9ARCH) HSP 1 Score: 186 bits (473), Expect = 7.430e-56 Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYF 528
H+ IG+PYAWS+++ T+ +E G V +AA DWSL A P+SI F HGL + G +Q +VG R SMA A FG L A GIH H+LPLLY GYGI+ G GIGLAYTPP+QTLM+WF +++G+ASG+ +AGFGSGAL+F+ A L F++ PE+ GP + +G+ F
Sbjct: 98 HLCIGSPYAWSLMADTITKEAGFVLSAASDWSLMEAAFPLSIVFVAHGLSGSIFGKWQLKVGTRKSMAAAACAFGSSLLFAAAGIHFHSLPLLYVGYGILGGTGIGLAYTPPVQTLMQWFPEKKGVASGLTLAGFGSGALIFTLCAQALMKHFAKLPEYLGPAKSFTTQVIEGKLF 273
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A2S6RDT0_9PROT (Putative MFS-type transporter YhjX n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6RDT0_9PROT) HSP 1 Score: 186 bits (473), Expect = 8.200e-53 Identity = 93/188 (49.47%), Postives = 125/188 (66.49%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYFVESGAEGLREVV 564
H+ IG+ YAWS+ + + +ELGVVS++ADDWSL+A S+A GL AA AG + VGPR A TL+GGG +G+LGI+ H L L+Y GYG+ G G+GL Y P+ TL+ WF DRRG+A+GM I GFG GA++ +P FL D F+RAPEF GP +A+ +I + GR FVE E + +V
Sbjct: 38 HLCIGSVYAWSIFNPALIKELGVVSSSADDWSLSAVVWIFSVAIVSLGLAAAIAGKWLEDVGPRCVGVTAATLWGGGFIIGSLGIYTHQLWLVYLGYGVFGGCGLGLGYVSPVSTLIRWFPDRRGMATGMAIMGFGGGAMIGAPLKKFLLDYFARAPEFLGPENALNLITEGGRRFVEVAGEKVEVIV 225
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A0G4IRE8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRE8_PLABS) HSP 1 Score: 184 bits (467), Expect = 1.030e-51 Identity = 90/188 (47.87%), Postives = 127/188 (67.55%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYFVESGAEGLREVV 564
H+ IG+PYAWS+++ + +ELG+VS+AA DW L A +S+ FA GL AA G++Q RVGP S+ A FG GL + +G+ H+LPL+Y GYG+++G+G+GLAYTPP+Q LME+F DR+ LASG+ +AGFG G LLF+P + L F + P G AV + K G+ F ++ + GL EVV
Sbjct: 79 HLCIGSPYAWSLIADPMTRELGIVSSAAGDWGLPATAGVLSVTFAFQGLTAAALGNWQNRVGPTISVGAAALCFGSGLMLAGVGVLNHSLPLVYLGYGVLSGIGVGLAYTPPIQVLMEYFPDRKALASGVTVAGFGCGGLLFAPLSGKLMSIFKKDPTLIGAEGAVSTVTKSGQLFADTPS-GLVEVV 265
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A0V0QW39_PSEPJ (Major facilitator superfamily domain, general substrate transporter n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QW39_PSEPJ) HSP 1 Score: 184 bits (466), Expect = 2.170e-51 Identity = 89/188 (47.34%), Postives = 127/188 (67.55%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFSPAASFLTDTFSRAPEFAGPRDAVEVIAKDGRYFVESGAEGLREVV 564
H+ IG PYAWS+ + + QE GVV+++A DW+LN T P+S+ F M G+ AA AG Q + G R S+ A + + G+ +GA GI+ H+L +LY GYG +AG+G+G AYTPPLQ LM+W DR+GLASG++IAGFGSGA++ P+A +L F + PE+ G VE + G+ F + G + +EVV
Sbjct: 81 HLCIGGPYAWSIFAQALTQEFGVVASSALDWTLNQTTFPLSLCFMMQGVSAALAGGLQIKYGLRLSLLAASSCYFTGVVIGAAGIYFHSLSMLYMGYGFLAGIGVGTAYTPPLQALMQWLPDRKGLASGLIIAGFGSGAVIMGPSAQYLMKKFHKFPEYVGKITDVETYQEAGKLFAKVGGQA-KEVV 267
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Match: A0A482RXS0_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXS0_9ARCH) HSP 1 Score: 172 bits (437), Expect = 9.180e-51 Identity = 81/143 (56.64%), Postives = 110/143 (76.92%), Query Frame = 1
Query: 1 HMAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAAGAGSFQYRVGPRASMAIAGTLFGGGLGVGALGIHLHNLPLLYAGYGIMAGVGIGLAYTPPLQTLMEWFSDRRGLASGMVIAGFGSGALLFS 429
H+ IG+PYAWS+++ + +ELG V ++A DW+L A LP+S+ F GL AA G +Q +VG R S+ A + FGGGL VG+ GI++H+LPLLY GYG++AG GIGL YTPP+Q LM+WF D++G+ASG+ IAGFGSGALLF+
Sbjct: 92 HLCIGSPYAWSMMADELTRELGFVVSSAQDWTLMQAALPLSLVFIFQGLAAAYFGKWQIKVGVRKSLFAAASCFGGGLLVGSAGIYMHSLPLLYLGYGVLAGTGIGLGYTPPVQALMQWFPDKKGIASGITIAGFGSGALLFT 234 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115056.3132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115056.3132.1 >prot_M-pyrifera_M_contig115056.3132.1 ID=prot_M-pyrifera_M_contig115056.3132.1|Name=mRNA_M-pyrifera_M_contig115056.3132.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp MAIGTPYAWSVLSGTVAQELGVVSAAADDWSLNAATLPMSIAFAMHGLVAback to top mRNA from alignment at M-pyrifera_M_contig115056:6..569- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115056.3132.1 ID=mRNA_M-pyrifera_M_contig115056.3132.1|Name=mRNA_M-pyrifera_M_contig115056.3132.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig115056:6..569- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115056:6..569- >mRNA_M-pyrifera_M_contig115056.3132.1 ID=mRNA_M-pyrifera_M_contig115056.3132.1|Name=mRNA_M-pyrifera_M_contig115056.3132.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig115056:6..569- (Macrocystis pyrifera P11B4 male)back to top |