mRNA_M-pyrifera_M_contig115049.3130.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A2E0SYZ4_9ACTN (AAA family ATPase n=7 Tax=Actinobacteria TaxID=201174 RepID=A0A2E0SYZ4_9ACTN) HSP 1 Score: 287 bits (735), Expect = 1.260e-93 Identity = 148/170 (87.06%), Postives = 157/170 (92.35%), Query Frame = 1
Query: 1 VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
++DDLF+AAA+ RL GRSPLAARLRPRNLDDVVGQRHLLARG+PLRALI+ RLSSVIFWGPPGTGKTSL+RL+A+TTEKVF ELSAVTASVKDVRE A AR RLGERG GTILFL EVHRFNKAQQDTLLPAVEEGLIVLIGATTE PHFEVNPPLMSRSTLFRL AL
Sbjct: 1 MADDLFAAAAEERLSGRSPLAARLRPRNLDDVVGQRHLLARGRPLRALIEGXRLSSVIFWGPPGTGKTSLSRLIASTTEKVFVELSAVTASVKDVREEXASARHRLGERGTGTILFLXEVHRFNKAQQDTLLPAVEEGLIVLIGATTEXPHFEVNPPLMSRSTLFRLHAL 170
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A7K1ZBG4_9ACTN (Replication-associated recombination protein A n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBG4_9ACTN) HSP 1 Score: 281 bits (719), Expect = 3.200e-91 Identity = 145/170 (85.29%), Postives = 156/170 (91.76%), Query Frame = 1
Query: 1 VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
+SDDLFS AA+ L+ RSPLAARLRPRNLDDVVGQ HLLA G+PLRALI++DRLSSVI WGPPGTGKTS+ARLVAT+T K FEELSAV ASVKDVRE+IA AR+RLGE+ GTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRL AL
Sbjct: 1 MSDDLFSEAAREHLKSRSPLAARLRPRNLDDVVGQEHLLAPGRPLRALIESDRLSSVILWGPPGTGKTSVARLVATSTNKRFEELSAVAASVKDVREIIAAARRRLGEQEMGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLHAL 170
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A6I3F441_9ACTN (AAA family ATPase n=2 Tax=root TaxID=1 RepID=A0A6I3F441_9ACTN) HSP 1 Score: 267 bits (682), Expect = 1.660e-85 Identity = 134/170 (78.82%), Postives = 155/170 (91.18%), Query Frame = 1
Query: 1 VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
+++DLF+AAA+ RL ++PLAARLRP +LDDVVGQ HLL +GKPLRALI+ADRLSSVIFWGPPGTGKTS+A+LVA TT K FE+LSAVTA+VKDVREV A+A+ RLG+RGQGTILFLDEVHRFNKAQQD LLP+VE GL+VLIGATTENP FEVNPPL+SRSTLFRL+ L
Sbjct: 1 MAEDLFAAAAEDRLVRQAPLAARLRPYSLDDVVGQEHLLGKGKPLRALIEADRLSSVIFWGPPGTGKTSVAQLVARTTSKAFEQLSAVTATVKDVREVAARAQDRLGQRGQGTILFLDEVHRFNKAQQDALLPSVESGLLVLIGATTENPFFEVNPPLLSRSTLFRLEPL 170
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A3M2GQM6_ACTSX (Replication-associated recombination protein A n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GQM6_ACTSX) HSP 1 Score: 266 bits (681), Expect = 2.490e-85 Identity = 136/168 (80.95%), Postives = 151/168 (89.88%), Query Frame = 1
Query: 7 DDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
DDLF+AAA RL R+PLAARLRPR+LD++VGQ HLL G+PLR LI+ADRLSSVI WGPPGTGKT+LARLVA+TT + F ELSAVTA+VKDVREVIA AR RLGE+G+GTILFLDEVHRFN+AQQD LLPAVEEGL+VLIGATTENPHFEVNPPLMSRSTLFRL L
Sbjct: 6 DDLFAAAAAERLRERTPLAARLRPRSLDEIVGQDHLLGPGRPLRRLIEADRLSSVILWGPPGTGKTTLARLVASTTRQSFVELSAVTATVKDVREVIAAARSRLGEQGRGTILFLDEVHRFNRAQQDALLPAVEEGLLVLIGATTENPHFEVNPPLMSRSTLFRLHPL 173
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A351EVD7_9ACTN (AAA family ATPase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EVD7_9ACTN) HSP 1 Score: 258 bits (660), Expect = 4.900e-85 Identity = 132/170 (77.65%), Postives = 151/170 (88.82%), Query Frame = 1
Query: 1 VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
+SDDLF+AAA+ RLE R PLA+R+RP LDD+VGQ+HLL +GKPLR LI+ADRLSSV+ WGP GTGKT+LAR+VA +T K F +LSAVTA+VKDVRE IAKARQRLGER Q TILFLDEVHRFNKAQQD+LLPAVE GLIVLIGATTENP+FEVN PL+SRSTLFRL+ L
Sbjct: 1 MSDDLFAAAAEQRLERRQPLASRMRPIRLDDIVGQKHLLGQGKPLRRLIEADRLSSVVLWGPAGTGKTTLARVVARSTAKSFVQLSAVTATVKDVREEIAKARQRLGEREQATILFLDEVHRFNKAQQDSLLPAVESGLIVLIGATTENPYFEVNAPLLSRSTLFRLEPL 170
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A349B5S1_9ACTN (AAA family ATPase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B5S1_9ACTN) HSP 1 Score: 264 bits (675), Expect = 1.350e-84 Identity = 132/170 (77.65%), Postives = 150/170 (88.24%), Query Frame = 1
Query: 1 VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
+SDDLF+AAA RLE R PLAARLRPR+LDD+VGQ HLL GKPLR+L++ DRLSS + WGPPGTGKT+LAR VA TEKVF +LSAVTA+VKDVRE IA+AR RLGE+G+GTILFLDE+HRFNKAQQD LLPAVEEGL+VLIGATTENP+FEVN PL SRSTLFRL+ L
Sbjct: 1 MSDDLFAAAASARLESRQPLAARLRPRSLDDIVGQEHLLGPGKPLRSLVERDRLSSALLWGPPGTGKTTLARAVAAHTEKVFVQLSAVTATVKDVRETIAQARHRLGEQGRGTILFLDEIHRFNKAQQDALLPAVEEGLVVLIGATTENPYFEVNAPLRSRSTLFRLEPL 170
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A5Q2RJS5_9ACTN (AAA family ATPase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RJS5_9ACTN) HSP 1 Score: 264 bits (674), Expect = 1.650e-84 Identity = 132/170 (77.65%), Postives = 152/170 (89.41%), Query Frame = 1
Query: 1 VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
++DDLFSAAA RL+ ++PLAARLRPR LDDVVGQ HLLA G PLR L++ADRLSSV+FWGPPGTGKT+LARLVA ++ K FE+LSAV+ASVKDVREVIA+A RLG+ GQGTILFLDEVHRFNKAQQD LLP+VE GL+VL+GATTENP FEVNPPL+SRSTLFRL+ L
Sbjct: 1 MADDLFSAAADERLQRQAPLAARLRPRTLDDVVGQAHLLAPGAPLRQLLEADRLSSVVFWGPPGTGKTTLARLVADSSRKAFEQLSAVSASVKDVREVIARAEARLGQHGQGTILFLDEVHRFNKAQQDALLPSVESGLLVLVGATTENPFFEVNPPLLSRSTLFRLEPL 170
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A6L6EL30_9ACTN (AAA family ATPase n=3 Tax=root TaxID=1 RepID=A0A6L6EL30_9ACTN) HSP 1 Score: 263 bits (672), Expect = 8.780e-84 Identity = 130/170 (76.47%), Postives = 153/170 (90.00%), Query Frame = 1
Query: 1 VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
+++DLF+AAA+ RL ++PLAAR+RPR LD+VVGQ HLL RG+PLRALI+ADRLSSVI WGPPGTGKTSL++L+A TT K FE+LSAVTA+VKDVREV A+A+ RLG+RGQGTILFLDEVHRFNKAQQD LLP+VE GL+ LIGATTENP FEVNPPL+SRSTLFRL+ L
Sbjct: 1 MAEDLFAAAAEDRLTRQAPLAARMRPRTLDEVVGQEHLLGRGRPLRALIEADRLSSVILWGPPGTGKTSLSQLIANTTAKAFEQLSAVTATVKDVREVAARAQDRLGQRGQGTILFLDEVHRFNKAQQDALLPSVESGLLTLIGATTENPFFEVNPPLLSRSTLFRLEPL 170
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A539DS72_9ACTN (Putative ATPase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DS72_9ACTN) HSP 1 Score: 253 bits (645), Expect = 1.180e-82 Identity = 125/167 (74.85%), Postives = 147/167 (88.02%), Query Frame = 1
Query: 10 DLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
DLFSAAA+ RL+ +SPLAARLRPR+LDDVVGQ HL+ G+PLR L++ DRL+S IFWGPPGTGKT+LA V+ TT++VFE+LSAV A VKDVREVI +ARQRLGE G+GTILFLDE+HRF+KAQQD LLPAVE+G + LIGATTENP+FEVNPPL SRSTLFRL+ L
Sbjct: 14 DLFSAAAEQRLKSQSPLAARLRPRSLDDVVGQEHLVGPGRPLRRLVEQDRLTSAIFWGPPGTGKTTLALAVSGTTKRVFEQLSAVNAGVKDVREVIERARQRLGEHGRGTILFLDEIHRFSKAQQDALLPAVEDGTLTLIGATTENPYFEVNPPLRSRSTLFRLEPL 180
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Match: A0A7K2A4Z3_9ACTN (Replication-associated recombination protein A n=13 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A4Z3_9ACTN) HSP 1 Score: 259 bits (662), Expect = 2.250e-82 Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 1
Query: 1 VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDADRLSSVIFWGPPGTGKTSLARLVATTTEKVFEELSAVTASVKDVREVIAKARQRLGERGQGTILFLDEVHRFNKAQQDTLLPAVEEGLIVLIGATTENPHFEVNPPLMSRSTLFRLQAL 510
++ DLF AAA RL R+PLAARLRPR LD++VGQ HL+ G+PLR LI+ADRLSSVI WGPPGTGKT+LAR+VA TT K FEELSAVTA VKDVR VI +AR RLG +G GTILFLDEVHRFNKAQQD LLPAVE+GLIVLIGATTENPHFEVNPPLMSRSTLFRL L
Sbjct: 1 MAGDLFDAAAAERLRMRAPLAARLRPRTLDEIVGQDHLVGPGRPLRELIEADRLSSVILWGPPGTGKTTLARVVALTTAKAFEELSAVTAGVKDVRAVIERARDRLGTQGTGTILFLDEVHRFNKAQQDALLPAVEDGLIVLIGATTENPHFEVNPPLMSRSTLFRLNPL 170 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115049.3130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115049.3130.1 >prot_M-pyrifera_M_contig115049.3130.1 ID=prot_M-pyrifera_M_contig115049.3130.1|Name=mRNA_M-pyrifera_M_contig115049.3130.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp VSDDLFSAAAQTRLEGRSPLAARLRPRNLDDVVGQRHLLARGKPLRALIDback to top mRNA from alignment at M-pyrifera_M_contig115049:2..511- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115049.3130.1 ID=mRNA_M-pyrifera_M_contig115049.3130.1|Name=mRNA_M-pyrifera_M_contig115049.3130.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig115049:2..511- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115049:2..511- >mRNA_M-pyrifera_M_contig115049.3130.1 ID=mRNA_M-pyrifera_M_contig115049.3130.1|Name=mRNA_M-pyrifera_M_contig115049.3130.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig115049:2..511- (Macrocystis pyrifera P11B4 male)back to top |