mRNA_M-pyrifera_M_contig115044.3128.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig115044.3128.1
Unique NamemRNA_M-pyrifera_M_contig115044.3128.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A517RKS8_9PLAN (N(G),N(G)-dimethylarginine dimethylaminohydrolase n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517RKS8_9PLAN)

HSP 1 Score: 170 bits (430), Expect = 8.320e-51
Identity = 78/104 (75.00%), Postives = 87/104 (83.65%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAW 312
            CFCPLS TEAI YPPAFD Y Q+AL  H+   I V D EA+RFACNAVV+GK V LNTGCP+LE +L++RGYE H+TPLDEFIKAGGSAKCLTLRLDGE AAAW
Sbjct:  162 CFCPLSETEAIYYPPAFDSYAQQALKEHIPHLIPVVDQEAQRFACNAVVIGKSVALNTGCPQLEKDLKERGYEAHSTPLDEFIKAGGSAKCLTLRLDGECAAAW 265          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A517Z3I3_9PLAN (N(G),N(G)-dimethylarginine dimethylaminohydrolase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z3I3_9PLAN)

HSP 1 Score: 170 bits (431), Expect = 9.690e-51
Identity = 76/104 (73.08%), Postives = 91/104 (87.50%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAW 312
            CFCPL+  EA+ YPPAFDEYGQ+A+  H+   I V+D+EA RFACNAVV+G++VVLNTGC +LE++LR+RGY PHATPLDEFIKAGGSAKCLTLRLDGE+AA W
Sbjct:  172 CFCPLAEEEALWYPPAFDEYGQRAIRQHIPRLIEVNDDEAARFACNAVVVGRNVVLNTGCEQLEADLRERGYTPHATPLDEFIKAGGSAKCLTLRLDGEEAAIW 275          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A517ZPU2_9PLAN (N(G),N(G)-dimethylarginine dimethylaminohydrolase n=4 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZPU2_9PLAN)

HSP 1 Score: 170 bits (430), Expect = 1.230e-50
Identity = 79/104 (75.96%), Postives = 86/104 (82.69%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAW 312
            CFCPLS  EAI YPPAFDEY Q A+  HVE+ I V ++EA RFACNAVV+G+ VVLNTGCP LE EL+DRGYEPH T L EFIKAGGSAKCLTLRLDGEDAA W
Sbjct:  172 CFCPLSADEAIYYPPAFDEYAQAAISAHVENLIPVSESEAARFACNAVVIGRKVVLNTGCPELERELQDRGYEPHHTELGEFIKAGGSAKCLTLRLDGEDAAIW 275          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: UPI0019B44846 (Amidinotransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019B44846)

HSP 1 Score: 163 bits (413), Expect = 4.320e-50
Identity = 77/104 (74.04%), Postives = 83/104 (79.81%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAW 312
            CFCPLS TEAI YPPAFDEYGQ AL  HV + I V  +EA RFACNAVV+G+HV LNTGCP LE  L +RG+  HAT L EFIKAGGSAKCLTLRLDGEDAA W
Sbjct:   20 CFCPLSPTEAIYYPPAFDEYGQAALRQHVPTLIEVRPDEAARFACNAVVVGRHVALNTGCPELERSLSERGFTTHATELGEFIKAGGSAKCLTLRLDGEDAALW 123          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A517SJU0_9PLAN (N(G),N(G)-dimethylarginine dimethylaminohydrolase n=1 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SJU0_9PLAN)

HSP 1 Score: 167 bits (424), Expect = 1.040e-49
Identity = 78/106 (73.58%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAWRA 318
            CFCPL+ + AI YPPAFDEYGQKA+   V   I V DNEA RFACNAVV+G+HV LN+GCP LE++L+  GY  HATPLDEFIKAGGSAKCLTLRLDGEDAAAWR+
Sbjct:  171 CFCPLNASTAIWYPPAFDEYGQKAITACVPKLIEVTDNEAARFACNAVVVGQHVALNSGCPDLETKLKGVGYTAHATPLDEFIKAGGSAKCLTLRLDGEDAAAWRS 276          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A518AWR0_9BACT (N(G),N(G)-dimethylarginine dimethylaminohydrolase n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518AWR0_9BACT)

HSP 1 Score: 167 bits (423), Expect = 1.520e-49
Identity = 75/106 (70.75%), Postives = 88/106 (83.02%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAWRA 318
            CFCPL+  EAI YPPAFD+YG++A+ G ++  I V  +EAERFACNAVV+G+ V  NTGC  L +ELRDRGYEP ATPLDEF+KAGGSAKCLTLRLDGE AA+WRA
Sbjct:  173 CFCPLAEDEAIWYPPAFDDYGRRAIEGTIDKLIAVEQSEAERFACNAVVVGRQVFTNTGCNELHAELRDRGYEPTATPLDEFVKAGGSAKCLTLRLDGEQAASWRA 278          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A518ABJ3_9PLAN (N(G),N(G)-dimethylarginine dimethylaminohydrolase n=11 Tax=Gimesia TaxID=1649453 RepID=A0A518ABJ3_9PLAN)

HSP 1 Score: 166 bits (420), Expect = 3.460e-49
Identity = 77/104 (74.04%), Postives = 84/104 (80.77%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAW 312
            CFCPLS TEAI YPPAFD Y Q+AL  H+   I V D EA+RFACNAVV+GK V LNTGCP LE  L +RGY+PH+TPLDEFIKAGGSAKCLTLRLDGE AA W
Sbjct:  171 CFCPLSETEAIYYPPAFDSYAQQALQEHIPHLIPVVDAEAQRFACNAVVIGKSVALNTGCPELEQALLERGYDPHSTPLDEFIKAGGSAKCLTLRLDGECAAIW 274          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A517WQI7_9PLAN (N(G),N(G)-dimethylarginine dimethylaminohydrolase n=4 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WQI7_9PLAN)

HSP 1 Score: 165 bits (417), Expect = 7.660e-49
Identity = 77/104 (74.04%), Postives = 85/104 (81.73%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAW 312
            CFCPLS TEAI YPPAFDEYGQ+AL  HV   I V + EA+RFACNAVV+GK V LNTGCP+LE +L   GYE ++TPLDEFIKAGGSAKCLTLRLDGE AA W
Sbjct:  162 CFCPLSETEAIYYPPAFDEYGQQALKEHVPHLIPVVEKEAQRFACNAVVIGKSVALNTGCPQLEKDLNQLGYETYSTPLDEFIKAGGSAKCLTLRLDGECAAVW 265          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A3B1DHH4_9ZZZZ (NG,NG-dimethylarginine dimethylaminohydrolase 1 n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DHH4_9ZZZZ)

HSP 1 Score: 162 bits (409), Expect = 2.360e-47
Identity = 74/104 (71.15%), Postives = 84/104 (80.77%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAW 312
            CFCP+S+TEAI YP AFDEYGQ AL+ H+   I V+  EA RFACNAVVLGK +VLNTGCP+LE  L+ RGY  H+T L EFIKAGGSAKCLTLRLDGE+AA W
Sbjct:  180 CFCPISKTEAIYYPAAFDEYGQTALLEHIPQLIEVNSQEAARFACNAVVLGKDIVLNTGCPQLEKSLKKRGYTTHSTELGEFIKAGGSAKCLTLRLDGEEAAIW 283          
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Match: A0A517VJ61_9PLAN (N(G),N(G)-dimethylarginine dimethylaminohydrolase n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VJ61_9PLAN)

HSP 1 Score: 160 bits (406), Expect = 3.510e-47
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 1
Query:    1 CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVLGKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGEDAAAW 312
            CFCPLS TEAI YPPAFDEYGQ+AL  ++   I V   EA+RFACNAVVLG+ VV+NTGCP+LE++L+ RGY+  +TPLDEFIKAGGSAKCLTLRLDGE AA W
Sbjct:  162 CFCPLSETEAIYYPPAFDEYGQQALKEYIPHLIPVVKAEAQRFACNAVVLGETVVMNTGCPQLEADLQQRGYQTLSTPLDEFIKAGGSAKCLTLRLDGERAAVW 265          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115044.3128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517RKS8_9PLAN8.320e-5175.00N(G),N(G)-dimethylarginine dimethylaminohydrolase ... [more]
A0A517Z3I3_9PLAN9.690e-5173.08N(G),N(G)-dimethylarginine dimethylaminohydrolase ... [more]
A0A517ZPU2_9PLAN1.230e-5075.96N(G),N(G)-dimethylarginine dimethylaminohydrolase ... [more]
UPI0019B448464.320e-5074.04Amidinotransferase n=1 Tax=Planctomycetaceae bacte... [more]
A0A517SJU0_9PLAN1.040e-4973.58N(G),N(G)-dimethylarginine dimethylaminohydrolase ... [more]
A0A518AWR0_9BACT1.520e-4970.75N(G),N(G)-dimethylarginine dimethylaminohydrolase ... [more]
A0A518ABJ3_9PLAN3.460e-4974.04N(G),N(G)-dimethylarginine dimethylaminohydrolase ... [more]
A0A517WQI7_9PLAN7.660e-4974.04N(G),N(G)-dimethylarginine dimethylaminohydrolase ... [more]
A0A3B1DHH4_9ZZZZ2.360e-4771.15NG,NG-dimethylarginine dimethylaminohydrolase 1 n=... [more]
A0A517VJ61_9PLAN3.510e-4772.12N(G),N(G)-dimethylarginine dimethylaminohydrolase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115044contigM-pyrifera_M_contig115044:244..567 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score162.2
Seed ortholog evalue1.4e-37
Seed eggNOG ortholog344747.PM8797T_20169
KEGG rclassRC00006,RC00062
KEGG koko:K00819
KEGG ReactionR00667
KEGG Pathwayko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0016403,GO:0016787,GO:0016810,GO:0016813
EggNOG free text desc.Amidinotransferase
EggNOG OGs2IXSX@203682,COG1834@1,COG1834@2
EC2.6.1.13
COG Functional cat.E
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01007
Exons1
Model size324
Cds size324
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815666.5589137-CDS-M-pyrifera_M_contig115044:243..5671622815666.5589137-CDS-M-pyrifera_M_contig115044:243..567Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115044 244..567 -
1692277512.2858443-CDS-M-pyrifera_M_contig115044:243..5671692277512.2858443-CDS-M-pyrifera_M_contig115044:243..567Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig115044 244..567 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115044.3128.1prot_M-pyrifera_M_contig115044.3128.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig115044 244..567 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig115044.3128.1

>prot_M-pyrifera_M_contig115044.3128.1 ID=prot_M-pyrifera_M_contig115044.3128.1|Name=mRNA_M-pyrifera_M_contig115044.3128.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
CFCPLSRTEAIVYPPAFDEYGQKALVGHVESSIIVHDNEAERFACNAVVL
GKHVVLNTGCPRLESELRDRGYEPHATPLDEFIKAGGSAKCLTLRLDGED
AAAWRAG*
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mRNA from alignment at M-pyrifera_M_contig115044:244..567-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig115044.3128.1 ID=mRNA_M-pyrifera_M_contig115044.3128.1|Name=mRNA_M-pyrifera_M_contig115044.3128.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig115044:244..567- (Macrocystis pyrifera P11B4 male)
TGCTTCTGTCCGCTCAGTAGAACGGAAGCGATCGTCTACCCGCCTGCCTT CGACGAGTACGGGCAGAAGGCGTTGGTGGGGCACGTCGAGAGTTCGATCA TCGTCCACGACAATGAGGCTGAACGGTTTGCCTGCAACGCGGTTGTACTC GGGAAGCATGTGGTGTTGAACACCGGGTGTCCGAGGTTGGAATCCGAACT TCGTGACCGTGGTTACGAACCGCACGCAACGCCACTCGATGAGTTCATCA AAGCTGGCGGGAGCGCCAAGTGTCTGACCCTGCGTCTCGATGGCGAGGAT GCTGCGGCCTGGCGAGCAGGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig115044:244..567-

>mRNA_M-pyrifera_M_contig115044.3128.1 ID=mRNA_M-pyrifera_M_contig115044.3128.1|Name=mRNA_M-pyrifera_M_contig115044.3128.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig115044:244..567- (Macrocystis pyrifera P11B4 male)
TGCTTCTGTCCGCTCAGTAGAACGGAAGCGATCGTCTACCCGCCTGCCTT
CGACGAGTACGGGCAGAAGGCGTTGGTGGGGCACGTCGAGAGTTCGATCA
TCGTCCACGACAATGAGGCTGAACGGTTTGCCTGCAACGCGGTTGTACTC
GGGAAGCATGTGGTGTTGAACACCGGGTGTCCGAGGTTGGAATCCGAACT
TCGTGACCGTGGTTACGAACCGCACGCAACGCCACTCGATGAGTTCATCA
AAGCTGGCGGGAGCGCCAAGTGTCTGACCCTGCGTCTCGATGGCGAGGAT
GCTGCGGCCTGGCGAGCAGGGTGATGCTTCTGTCCGCTCAGTAGAACGGA
AGCGATCGTCTACCCGCCTGCCTTCGACGAGTACGGGCAGAAGGCGTTGG
TGGGGCACGTCGAGAGTTCGATCATCGTCCACGACAATGAGGCTGAACGG
TTTGCCTGCAACGCGGTTGTACTCGGGAAGCATGTGGTGTTGAACACCGG
GTGTCCGAGGTTGGAATCCGAACTTCGTGACCGTGGTTACGAACCGCACG
CAACGCCACTCGATGAGTTCATCAAAGCTGGCGGGAGCGCCAAGTGTCTG
ACCCTGCGTCTCGATGGCGAGGATGCTGCGGCCTGGCGAGCAGGGTGA
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