mRNA_M-pyrifera_M_contig11502.3124.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11502.3124.1
Unique NamemRNA_M-pyrifera_M_contig11502.3124.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A6H5KZL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL7_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 8.730e-136
Identity = 204/229 (89.08%), Postives = 219/229 (95.63%), Query Frame = 1 
Query:    1 MQDRGGVRVRRRMDKTKGVPTDQQPFNELQELKEDVLFGWAQEDFKGLVTRLALIYAGAMAVSIPIGTTTFPNQLREALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDPYAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGGLCD 687
            MQDRGGVRVRRRMDK++ VPTDQQPFNELQELKED LFGWAQED KGLVTRLALIYA AMAVSIPIGTTTFPNQL EALL+AN+G LGVLLAV  RLYSGW+YVS+RL AEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEV+PA+DRLKA+LAAIG+GFMLTVVGFK+VVPDDPYAMLDDTYL+TLK DDD+AN+AAKKAAA+GTNRPVYCESRYYQAMAGGGLCD
Sbjct:   82 MQDRGGVRVRRRMDKSRTVPTDQQPFNELQELKEDPLFGWAQEDSKGLVTRLALIYAVAMAVSIPIGTTTFPNQLPEALLAANIGGLGVLLAVAIRLYSGWNYVSLRLGAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVQPAVDRLKAVLAAIGLGFMLTVVGFKVVVPDDPYAMLDDTYLNTLKGDDDIANDAAKKAAARGTNRPVYCESRYYQAMAGGGLCD 310
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: D7FZ05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ05_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 1.250e-133
Identity = 200/227 (88.11%), Postives = 216/227 (95.15%), Query Frame = 1 
Query:    1 MQDRGGVRVRRRMDKTKGVPTDQQPFNELQELKEDVLFGWAQEDFKGLVTRLALIYAGAMAVSIPIGTTTFPNQLREALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDPYAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGGL 681
            MQDRGGVRVRRRMDK++ VPTDQQPFNELQELKED LFGWAQED KGLVTRLALIYA AMAVSIPIGTTTFPNQL EALL+AN+G LGVLLAV  RLYSGW+YVS+RL AEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEV+PA+DRLKA+L AIG+GF+LTVVGFK+VVPDDPYAMLDDTYL+TLK DDD+AN+AAKKAAA+GTNRPVYCESRYYQAMAGGGL
Sbjct:    1 MQDRGGVRVRRRMDKSRTVPTDQQPFNELQELKEDPLFGWAQEDSKGLVTRLALIYAVAMAVSIPIGTTTFPNQLPEALLAANIGGLGVLLAVAIRLYSGWNYVSLRLGAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVQPAVDRLKAVLGAIGLGFILTVVGFKVVVPDDPYAMLDDTYLNTLKGDDDIANDAAKKAAARGTNRPVYCESRYYQAMAGGGL 227
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A836CC34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC34_9STRA)

HSP 1 Score: 229 bits (583), Expect = 7.280e-66
Identity = 116/233 (49.79%), Postives = 157/233 (67.38%), Query Frame = 1 
Query:    1 MQD-RGGVRVRRRMDKTKGVPTDQQPFNELQELKEDVLFGWAQEDFKGLVTRLALIYAGAMAVSIPIGTTTFP--NQLREALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDPYAMLDDTYLSTLKSDDDVANEAAKKAAAKGTN-RPVYCESRYYQAMAGGGLCD 687
            +QD +GG ++ RR    K VP DQQPFNELQ LKE  +FGWAQ+D    + RL  +Y G   VS PI   TFP  +Q  + +L+ N+GALG++ A+  RLY+GW YV+ RLD +VV YE+SGWYDGS + KPPD++ARD+ML+ YE +P L RL+  LA +   F+ T+V ++++VP DPY M  D YL  L +++  A E A+ + A G   RP YC SRYY+A+AGG  CD
Sbjct:    7 LQDVQGGPKILRRARGGKKVPLDQQPFNELQNLKEAPMFGWAQKDLNSFLLRLGGVYTGGALVSFPIARVTFPGDDQFAQLVLATNIGALGLVTALTLRLYAGWDYVAQRLDEDVVAYEQSGWYDGSTYAKPPDVQARDQMLSIYEARPVLKRLRVTLAVLASLFVTTIVAYRVLVPTDPYEMYGDAYLKDLPANEWKAKETAEASKAAGAKARPAYCGSRYYKALAGGNGCD 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A6U1LWA6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LWA6_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.610e-51
Identity = 104/232 (44.83%), Postives = 150/232 (64.66%), Query Frame = 1 
Query:    1 MQDRGGVRVRRRMDKTKGVPTDQQPFNELQELKEDVLFGWAQEDFKGLVTRLALIYA-GAMAVSIPIGTTTFP--NQLREALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDPYAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGGLCD 687
            +QD     + R  DKT  VP DQQPFNEL  LK+   FGWAQ+D K L+ RL ++YA   + +S PI   T+P  +QL E L +AN+G + V+  +V RLY GW+Y+  +L +EVVEYEE+GWYDG++W KP +++ RD+ +  YEVKP ++R++ I+   GV  +L+V+ FK++   D Y   D   L TL+ D++    AA K AA+   +P YC SRYY+ +AGG  C+
Sbjct:   77 LQDPDAKPMYRMGDKTNTVPLDQQPFNELTNLKKAPFFGWAQKDLKFLLGRLGMVYALFFITLSYPISYATYPYGDQLLERLAAANLGNIIVVAVLVLRLYVGWAYIYDKLGSEVVEYEETGWYDGAQWVKPANVKTRDQFIATYEVKPVVERMEKIVGVFGVLVLLSVLAFKLLSVGD-YDPYDPKILQTLQMDEN----AAIKDAAQNRGKPTYCGSRYYKTVAGGNNCE 303
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A7S2F0W8_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F0W8_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.590e-47
Identity = 93/213 (43.66%), Postives = 135/213 (63.38%), Query Frame = 1 
Query:   55 VPTDQQPFNELQELKEDVLFGWAQEDFKGLVTRLALIYAGAMAV-SIPIGTTTFP--NQLREALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDPYAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGGLC 684
            VP  QQP  EL++LK    FGWAQ +    +T+++ +Y  +    S+ I   T+    Q  +ALL+ANVG++ +   ++ RLY GWSYV  RL+ +V  YEESGWYDG    KP D+RARDE+L  +EV+P L R+    A +GV F+ +++ FK+  P DPY   + +YL  L+ DD  A   A++A A+ +N+P YC+SRYY+A+AGG  C
Sbjct:  114 VPEGQQPAQELEDLKAAPFFGWAQLEDGEFLTKVSYLYGASFIFPSLAIAAITYELDRQPLQALLAANVGSMALTFVILVRLYVGWSYVGDRLEKDVGYYEESGWYDGFLSVKPKDVRARDELLFKFEVEPVLARVTKFTALVGVAFIASILAFKLAAPLDPYGQFESSYLDNLRGDDAAAMREAQEAGAR-SNKPTYCDSRYYKAVAGGNGC 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A7S1TYX4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYX4_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.570e-42
Identity = 89/219 (40.64%), Postives = 134/219 (61.19%), Query Frame = 1 
Query:   40 DKTKGVPTDQQPFNELQELKEDVLFGWAQEDFKGLVTRLALIYAGA-MAVSIPIGTTTFPNQLRE--ALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDPYAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGGLCD 687
            ++ +    +Q P  EL++L++  LF WAQ D    + R+ L+YAGA +   +PI   T+P +     A L+ + GA  ++L ++ RL  GWSY+  RL+++V++YEE+GWYDG    K  D+  RD++L++ EV P L RL     A G  F+ + +  K+  P DPYAM D  YL TL  DDD A EA + AA++G  RP+YC+SRYY+ +AG   C+
Sbjct:  103 ERQRAAMIEQGPAAELKDLQKAPLFSWAQLDDVPFLQRMGLVYAGAFVGAGLPIALVTYPREDERLVAFLAGSAGATFLVLMLIVRLAVGWSYIKDRLESDVLDYEETGWYDGFRSTKSKDVANRDKLLSSLEVVPVLTRLTKAGVAFGGLFLASCLLLKVAAPTDPYAMFDPEYLETLSRDDDAAAEAQRAAASRG--RPLYCDSRYYRTVAGASNCN 319
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A7S2C3X8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3X8_9STRA)

HSP 1 Score: 155 bits (392), Expect = 5.040e-39
Identity = 87/214 (40.65%), Postives = 124/214 (57.94%), Query Frame = 1 
Query:   55 VPTDQQPFNELQELKEDVLFGWAQEDFKGLVTRLALIYAGAMAV--SIPIGTTTFP--NQLREALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDPYAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGGLC 684
            VP  QQP  EL++LKE   F  A  +      ++ ++Y GA+ V  S+PI   T+P      +A+LSAN+GA  V    + RLY GWSYV  RL+ +V  YEESGWYDG    KPP++  RD++L  +EVKPALDR+   +         ++  F +  P DPY  L + YL  ++ DD  A    +++A   + +P YC+SRYY+A+AGG  C
Sbjct:   43 VPESQQPAQELEDLKEAPFFSMAALEDADFAKKIGIVY-GALFVFPSLPISLITYPLFEAPIQAILSANLGATVVTFLFLIRLYVGWSYVGDRLEKDVGYYEESGWYDGFLAVKPPEVAQRDQLLYQFEVKPALDRVIKFMLLGTASVAASIALFNVAAPSDPYDYLSEDYLQRVRQDDGAAMMETRRSA---SGKPTYCDSRYYKAVAGGNGC 252
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A7S2A6D1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6D1_TRICV)

HSP 1 Score: 152 bits (385), Expect = 1.560e-37
Identity = 89/214 (41.59%), Postives = 127/214 (59.35%), Query Frame = 1 
Query:   55 VPTDQQPFNELQELKEDVLFGWAQED--FKGLVTRLALIYAG-AMAVSIPIGTTTFPNQLREA--LLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDP-YAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGG 678
            VP +Q+P NE  +L    LFGWA E    KGL  RL  +YA   + +  PI   T+     E   L +AN GA+ V+L ++ RLYSGW YV  RL ++V+EYEESGWYDG   +K    +ARD  L   +V+P  DRLK   AA+   ++ ++VG  +    +P +   D   L TL+ D+ +AN+AA+K+    + RP YC++RYY+A+A GG
Sbjct:   87 VPEEQRPANEYLDLIRQPLFGWADETRGTKGLAIRLGAVYAAFGVLICYPIAGATYTQSGYELNKLAAANFGAVSVVLVLLIRLYSGWGYVGSRLKSKVIEYEESGWYDGDIEFKTEAEKARDLFLYRQDVRPVEDRLKGFSAAVAALWIASIVGLNVASSVNPIFNEYDPDMLKTLQYDEKMANKAAEKS----SGRPTYCDNRYYRAVANGG 296
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A7S2NRE5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NRE5_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.890e-37
Identity = 91/215 (42.33%), Postives = 121/215 (56.28%), Query Frame = 1 
Query:   52 GVPTDQQPFNELQELKEDVLFGWAQEDF--KGLVTRLALIYAGAMA-VSIPIGTTTF--PNQLREALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDP-YAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGG 678
            G+P DQ+P  E   +++  LF WA E+    GL+ RL L Y    A V  PI   TF  P+   + L +ANVG L  LL ++ RLYSGW Y+  RL ++VVE+EE+GWYDG   YK  +  ARD  L   EV+P   R+K +    G   +L  VGF   +   P +   D   L  L++DD +A  A K+A   G  RP YCESRYY+A+A GG
Sbjct:   83 GIPEDQRPATEYFNMRQQPLFNWASEETGTNGLIARLGLTYVALFALVCYPIAGATFILPDYEIQKLTAANVGDLAFLLVLLVRLYSGWGYIGARLQSKVVEFEETGWYDGDFEYKTKEETARDLFLYRSEVQPVEQRIKLVTLVTGALLVLGCVGFNASLKAKPMFNEYDPELLKVLQADDKLAGVAQKQAQLSG--RPTYCESRYYRAVANGG 295
[Close]
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Match: A0A1Z5K8M1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8M1_FISSO)

HSP 1 Score: 147 bits (372), Expect = 2.160e-36
Identity = 87/214 (40.65%), Postives = 125/214 (58.41%), Query Frame = 1 
Query:   55 VPTDQQPFNELQELKEDVLFGWAQEDF--KGLVTRLALIYAGAMA-VSIPIGTTTFPNQ--LREALLSANVGALGVLLAVVTRLYSGWSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDRLKAILAAIGVGFMLTVVGFKIVVPDDP-YAMLDDTYLSTLKSDDDVANEAAKKAAAKGTNRPVYCESRYYQAMAGGG 678
            VP  Q+P NE  ++    +FGWA ++   KGL+TRL L+Y+ + A V  PI   TF  +  L + L +ANVGA+ +++ V+ RLYSGW Y+  RL ++V+EYEE+GWYDG    K P    RD  L   EVKP ++RLK    A       +V+ F       P +   D   LS L+ D+ +A +AA  +     +RP YC++RYY+A+AGGG
Sbjct:   33 VPEAQRPVNEYMDVSNQPMFGWANKESGSKGLLTRLVLLYSISFAAVCYPIAGATFTQEGYLVQKLAAANVGAIFLVMVVMIRLYSGWDYLGQRLTSKVIEYEETGWYDGDIEMKTPTELQRDRFLYANEVKPVVERLKKFTMATAALCFASVIAFNAANSAKPMFDQYDPDMLSQLRYDEKLAEQAASSSG----SRPTYCDNRYYRAVAGGG 242
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11502.3124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZL7_9PHAE8.730e-13689.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ05_ECTSI1.250e-13388.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CC34_9STRA7.280e-6649.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1LWA6_9STRA2.610e-5144.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2F0W8_9STRA3.590e-4743.66Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1TYX4_9STRA2.570e-4240.64Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2C3X8_9STRA5.040e-3940.65Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2A6D1_TRICV1.560e-3741.59Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2NRE5_9STRA2.890e-3742.33Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5K8M1_FISSO2.160e-3640.65Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11502contigM-pyrifera_M_contig11502:274..6628 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score406.8
Seed ortholog evalue6.9e-111
Seed eggNOG ortholog2880.D7FZ05
Preferred nameCGLD27
Hectar predicted targeting categoryother localisation
GOsGO:0006950,GO:0008150,GO:0009605,GO:0009991,GO:0031667,GO:0042594,GO:0050896,GO:1990641
EggNOG free text desc.Protein of unknown function (DUF1230)
EggNOG OGs28JNY@1,2QS25@2759
Ec32 ortholog descriptionUncharacterised protein family Ycf36
Ec32 orthologEc-06_002060.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2473
Cds size690
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11502.3124.1prot_M-pyrifera_M_contig11502.3124.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11502 274..4845 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815666.3040402-CDS-M-pyrifera_M_contig11502:273..4111622815666.3040402-CDS-M-pyrifera_M_contig11502:273..411Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 274..411 +
1692277512.1738663-CDS-M-pyrifera_M_contig11502:273..4111692277512.1738663-CDS-M-pyrifera_M_contig11502:273..411Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 274..411 +
1622815666.3170779-CDS-M-pyrifera_M_contig11502:1438..14881622815666.3170779-CDS-M-pyrifera_M_contig11502:1438..1488Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 1439..1488 +
1692277512.184154-CDS-M-pyrifera_M_contig11502:1438..14881692277512.184154-CDS-M-pyrifera_M_contig11502:1438..1488Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 1439..1488 +
1622815666.3352342-CDS-M-pyrifera_M_contig11502:2172..22581622815666.3352342-CDS-M-pyrifera_M_contig11502:2172..2258Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 2173..2258 +
1692277512.192113-CDS-M-pyrifera_M_contig11502:2172..22581692277512.192113-CDS-M-pyrifera_M_contig11502:2172..2258Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 2173..2258 +
1622815666.348529-CDS-M-pyrifera_M_contig11502:2697..27781622815666.348529-CDS-M-pyrifera_M_contig11502:2697..2778Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 2698..2778 +
1692277512.199679-CDS-M-pyrifera_M_contig11502:2697..27781692277512.199679-CDS-M-pyrifera_M_contig11502:2697..2778Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 2698..2778 +
1622815666.3583307-CDS-M-pyrifera_M_contig11502:3385..34881622815666.3583307-CDS-M-pyrifera_M_contig11502:3385..3488Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 3386..3488 +
1692277512.2072833-CDS-M-pyrifera_M_contig11502:3385..34881692277512.2072833-CDS-M-pyrifera_M_contig11502:3385..3488Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 3386..3488 +
1622815666.3683124-CDS-M-pyrifera_M_contig11502:4343..44911622815666.3683124-CDS-M-pyrifera_M_contig11502:4343..4491Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 4344..4491 +
1692277512.2150798-CDS-M-pyrifera_M_contig11502:4343..44911692277512.2150798-CDS-M-pyrifera_M_contig11502:4343..4491Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 4344..4491 +
1622815666.3797798-CDS-M-pyrifera_M_contig11502:4761..48451622815666.3797798-CDS-M-pyrifera_M_contig11502:4761..4845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 4762..4845 +
1692277512.2225022-CDS-M-pyrifera_M_contig11502:4761..48451692277512.2225022-CDS-M-pyrifera_M_contig11502:4761..4845Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11502 4762..4845 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815666.3900294-UTR-M-pyrifera_M_contig11502:4845..66281622815666.3900294-UTR-M-pyrifera_M_contig11502:4845..6628Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11502 4846..6628 +
1692277512.2299535-UTR-M-pyrifera_M_contig11502:4845..66281692277512.2299535-UTR-M-pyrifera_M_contig11502:4845..6628Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11502 4846..6628 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11502.3124.1

>prot_M-pyrifera_M_contig11502.3124.1 ID=prot_M-pyrifera_M_contig11502.3124.1|Name=mRNA_M-pyrifera_M_contig11502.3124.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
MQDRGGVRVRRRMDKTKGVPTDQQPFNELQELKEDVLFGWAQEDFKGLVT
RLALIYAGAMAVSIPIGTTTFPNQLREALLSANVGALGVLLAVVTRLYSG
WSYVSIRLDAEVVEYEESGWYDGSEWYKPPDIRARDEMLNNYEVKPALDR
LKAILAAIGVGFMLTVVGFKIVVPDDPYAMLDDTYLSTLKSDDDVANEAA
KKAAAKGTNRPVYCESRYYQAMAGGGLCD*
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mRNA from alignment at M-pyrifera_M_contig11502:274..6628+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11502.3124.1 ID=mRNA_M-pyrifera_M_contig11502.3124.1|Name=mRNA_M-pyrifera_M_contig11502.3124.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6355bp|location=Sequence derived from alignment at M-pyrifera_M_contig11502:274..6628+ (Macrocystis pyrifera P11B4 male)
ATGCAGGACCGTGGTGGGGTGCGGGTACGTCGCCGCATGGACAAAACGAA
GGGCGTCCCGACCGACCAGCAACCGTTCAACGAGCTGCAGGAGCTCAAGG
AAGACGTCCTCTTCGGCTGGGCCCAAGAGGACTTCAAGGTACGGGTGCCT
TGATGCACGTACTGTAGGGTAGCGCTCTGTAGGATCTCGCGCTGGTGTGT
ACTACTGTAGTAATTGTCCGCACATATCGGACGCATCATCTGCAGATAGA
TCATGATCTACATCTAGATATTTTAAGGCAGATGGACATTCACTCCCGAG
CTTGCATGAACTGTTGTAGCTGATCATGTTGCCGGGTGGGATCCGTGTAA
TACCGTCTGCATGACCTATGACAGTGGCATCTGTTTCCTGGGGTTGGACC
TGTACTGTCTGTGCAACTTCTGCGCAATAAACCTCTGACAAAGGCAGGCG
AGGAACTAAATGATCTACTTCAGATAGATGAGATAGATAGACCATGGTCT
AATCCGAGGTGTGAAACTGTAGTCGACTGTATGCGCGGGTTGAATGCATA
TCAATGTGTATACCTTTTATTCCGGTATACATATGTCCAGATTTTAGGTC
GGACGGCCCGAACCTCCGGCTTAAGATGATGTCCGGCTCCATCCGGCTCA
AAAGAGATCCCTAGTTTAAGGCAGTGTGCATTGCTAACTTCCAGGTACCA
GGTATTAAATAATAGGGTGGAGACGAGAGGGGATGGCGTCGGCCAGGAGG
GACTGTAGCATGCAGGGGGTAGGGGCGCCGTAGCGCCTCGCCAACAATGC
GGGCATCGGCCGCTCCCTCGTCCGGTGCACTCCCTGGAAAAACCCTCGCA
CGATAATATGTGTTTGATTCCAAGGGACGAAGGGCCGCGGCACTTTTCCC
AAGTGTTTTTGTGCTGATGGTTGCGTGGCCGGTCAACTTGTTTGACGCCA
GGGCGGTGCATGCGGCCATGCCCCTGTAGATCGTCTTTATTTATGCAGCC
CTCCTCTGTCGATGTCGCTCTCGCCGTCTGTTCAACCGCTGCCTTTTTTA
CAGGATCGGTGCCTAGAATTTTCTTGCGACAATTTTTCACCTCCTGTTTA
TTTGTTCTGTGGTGTCCGCCCCTCTGTGACGGCGTTGCACACTTTGATTC
TGAACGCGCTCACAGGGTCTGGTGACCCGATTGGCTCTCATCTACGCGGG
AGCGATGGCCGTGAGGTGGGACATTTTGTTTTATCTATGATGAGCGTGGA
TGGGTGACCTCGCCCGTACCTTCTCGCTGTGTCTTGTAGTGCGTTCCTCG
CTTTTATGAGGACAGGACATACGCAAAAGCTTTTCCGGGATTTATGGCGG
TGGTTTGGACCTGTTGGTGTACATGTTTTGCCGTGTTTCTTAAGAGCTCC
AACAATAGTCAACCGCGAGCTGATGATATTTTCTAAGTCACACGGCGCCC
AAAAATCGGTACCCTTTCGAGATGACTCAAACGACGGACCGACCGATCGA
CCGACCGACCGACCGTCTGGGATCCACCGATGCACGCAAGGTTGACAGCA
ATTACAAGTGCCCTGCCACGCGATTTCCTACACAAGCGGCAGCTTCGCTC
TCTTCGTACCTAGTTCACACGCCTGGACGTGGGTATGCTTTGCTCCAAAA
AAACGCTCTCGTTGTACGATGCTTCCTTGAAACCAAGCAATTTGCCGAGC
GGATCCACGACAACCCCCATTATGCATCAGTTTACTTTCGGTGCGAAAGG
CAGAGTCCTCCATCGGTATGCCGCAACGGAGAAACACCCCTACCGCCGCT
CAGTGGTATCACCTGTTCTGGTGTATGCCGTCTTAAGAGCGACCCGCCCC
CCCTTTTTTTTCTCTTGCGGTGCTATTTCTTGTGACGGGATGCTTCCAGC
ATTCCGATCGGCACGACGACGTTCCCGAATCAACTGCGCGAGGCGCTTCT
GTCAGCAAACGTGGGCGCGCTGGGCGTGCTTCTCGGTGAGCCAAGTCAGG
TGTCGCTAAGCCAAAACGGCTACGTCGCAACGCACACTGGTGCTGGGTCA
GGAAGGCTGCGAAAGCGGGTGCAGGCGTACTGTCGTCGTCGTGGCCTGTG
ATGGTCGTCATCCCCGCCGGACGTTGTATCGTCGGCCCGACCACGTACAA
GCAGCAATCGCGCCGCTAAAGCTGCGAGCTTTTCATGTTGTGTCACCGCG
CCCGCGGGGCAATGCGCAGAGTATGCCGCCACATTCACGGGATGGAGGGG
TCGTGATCTTCCGTATCCTCCGCTTGCTCGCGCGCGCTCGGGTGTAAAGT
CAAGGGTATATCGCCGATATATCGATGCATCGTTTTCCGGGCCTGTTCTC
ATCGTACAACCGCTATGTGTGGGGTGATGACAGGGCCCCGTTTGCCTCGC
TCAAAACGATTCGTTCTCCGTCAGCGGTGGTGACACGGCTGTACAGCGGC
TGGAGCTACGTTTCCATACGCCTGGACGCTGAAGTTGTGGAGTACGAGGA
ATCAGGTGCGATGTTCGTTGGGTTCGTTCAATGAAATGTCACGGCCGTCT
GCTGCGGTCGGTTTTAAGTCGGGGTGGGTCTGGATGTCTGCGCATTCGGC
AATGAAGGCAACGCACTTGCCTTGCCGTTTTGTTGAATTGCCGCCACCCT
TTTTTGTGCTTGCCTCCGCTAGGTGTGTTCGTACGTATGACTGTCCGCAC
CCTGTACTCCCTTGCCTGGACACTTGTTCGCATCTCAAGGCTCTCGCCTA
CACGTACGAGGCCAGCACCGTCGTAACTTATTGCGTATTTCGGTTTCAAA
CTCTGTGTACGACTTTGCAGCAAATATGGCATGGGAAATGATTGCGTTTA
TTGATAGGCACCAGGAATTTGATACTAAACCAATAACTCCCAGCTTGATG
CGCTCCAGCTGGAATTGCAGATATCAAAATTGACCTCAAAGGGCTTCGGT
CGATTCTCGCCGATGCCAACTACCGTGTACAGCATTTCGGTATGCTTATC
GGCACAATCCAGCAATACCATGCAACCATGTTGCCACCGCTCATCGCGAC
CTCTCCGCTGCCGTCGTCCTGACCGTGCCCACTGATGATATGTATGTTAC
TTGGTGTGACAGGTTGGTATGATGGAAGCGAGTGGTACAAGCCGCCGGAC
ATTCGGGCGAGGGACGAAATGCTCAACAATTACGAAGTCAAGCCGGCGCT
CGATCGCCTCAAAGCGTGAGTGAAACGTTGGAACCACTACCATCCCGTTG
TCCGCGCTCTCATGACCACCGTTTGGTCGCCGCGGTACTCTCTAAGATGG
CAGTGTGCCTTTTGTGGGTGTTTTATCACGTGAAGTACGCCGCTCGTTAC
GCATGGTTTCGCAGCAATGCGGGGCAGAAGTCCACGGACTGCAGGGAAAA
GTGATTCTCATTGCTGTGATAAGGCGCTTAAGCCCGCTCGAGATCGGAAA
TGCGCACGAGGTACGTAGCCTTTGCTTGTCGCTCGTAGAACATCGCCCTT
CTGTTACCGACAGCGAACGTACATACCCTTGAGCTTTTCGAGAGGAGCAG
CAGCGATCGTATGAGTTGACGTTTTACTATATTTCCTGTCCAGTAGTGCG
CGAATAGTTTCTATAAAAGGTGTTTACGACAAAAAGGCTCGCCTAGAACA
GAGTCCGCGGGGGACGATTAGTTGGTGTCTTGGTGTCTCGATAGTAGCAA
CGGCTCCGCTTCGAGATGCGGCTCGCCCTTCCAGCTAAAGCCTCGCGCGG
GAAAAGCGGATCCGCGGATGCAACCGCACGCGTACTCGATCCTCGGAGCA
GTGACCTCGGCGACGCCCTCAATGGCAAAACTTGCTTACATGTACCAAAC
CAAACGACTTTGTATGAATGAAAAGGTGGCATTGATTGCTCTGGGTTTGG
CGATCTTTTGGCGACCTCGAATACATGCACGCCCTTGTCTTGTCCCCAAA
TCGGCGAGGAGTATGTCGTTCAAGTTTTCTCTCGCCGCCGCCGCCGCCGC
TGCCACCACGACCTCCCCCTCGCCCCCTCCTTTCGACATCTCGCTGCCGG
TTTATTTTTCCTGAAAACAGAATTCTCGCCGCGATCGGGGTGGGATTCAT
GCTGACCGTGGTGGGGTTCAAGATAGTGGTGCCGGATGACCCTTACGCCA
TGCTGGACGATACCTACCTCAGCACCCTCAAGAGCGACGATGACGTGGCG
AACGAAGCTGCCAAGAAGGTGCGTAGAACTTTATTCTTGTGTTTTTTCGC
TTGGGGGTCGGGCTGTCAGCGCTCATCCGTCACCCAGGCTTGCGTCGAAA
CCGTTGGCGGCCGGTGCGGGGTTGTTTGTGCTCACACCAGAGGACGTGAA
CAGCACCGACGCGAGCCAGCGCCCGTGTAGCAAAATACGTGTTTTTTTGG
AGACGAACGCACGATGTTGCCGCCCTTATATCTGCCGCATGGCGCAACCC
ACAACGGTTCGTCGATCCCCGTCCCGCGTTCCTCGCAGGCTGCGGCAAAG
GGCACCAACAGACCCGTTTACTGCGAGTCGCGCTACTACCAGGCCATGGC
GGGAGGCGGCCTTTGTGACTAGAGATAGGCTCCGGCTGAGATGCCGGTTC
CGGCCGACGTCGGCCCCAACTGGAATTGGCGGAAGGTAGATGAAGTCCGT
GTGTTAGTAGAGATGTGCACCGAGTAAGGATCTCGTTCTGCGTCATGCAG
TAGAGACCAATAAATGGCTGCTTTTGGGAGCCGGGAGGCGTGTGTACATC
CCCGTTGGTACTGTTGGGTTAATTCGAGGCAACATCAGGCAAGCCGTTCG
ACCCGGACTGCGTGCGCCTTGCTGGCTGTCAACTGAACTGTTTTCAGGGG
CAGGGCTTCCGGGACGGCGGCTTTTCTATTCGAGAGATTCGCTTCCTTCG
AATCGTTTCCGTTATGCGCCTTGAAATGGTTGAGCTGCGGTGATATCGAA
ATATGTGACTGCTCGATTTAACGACAAAAGTAGAATTTGCTGAGGACCTT
GTTGAATACCGCACACGAAGAACTTTAACAACCACTTGGGCTTATAGGTT
GCCTGCAGAGGTAGGTGAAAGCCAATAAAGCTCCCAAAGCACGCGGAGGC
CATACATCCCCATGTTCACGAAGCACGCGGATGTATCCGGAGAAATGAAC
GAATTGTCGATCCGATATCACTGGCTGCAGGGTGCATATCACAAAGCATA
ATATTTGACCGTATTTGATTTTTGTCATTACTCCAGCGTCAGCCCCTCCT
GAGTCTGATGCTTGAGCATATTTTTGTTTGTTTTCGCGTCGGTGGTGAGT
ACGTACTTGGGGGGAGCGAAACGCAGCTGGCCTTGGCGTGGCGGTGGTCT
GTTTCGTGTTTTTTTTTAAGGCATCGCTCATCGATAGATGATGCACCATT
GTCGGATAGGATGAACCCGCCTATGCTGGACATGAATACGTACGGTACCT
GAGTATACAAATCAATGGAGATCGGGCGGTGGCGTCTTGCATGTCGAAAC
CGCGGGCACCAGCGTGTCTTTTTGTTACTCGATGCTGCTCATGTTGCAGC
TGTCGTTGTGCTGCTGTAGTTCAAGGATCAGTTTGATTTTGGTAAACGAT
AGATAGAAGAGGAAAGTTTTTACCAGCAACGTTGTTTTCTTTTTTTCGAC
ATGAATATGGTTCCCACATGCTCTGTAGCTATGCCGTGTGAATGGCAACG
GACGAGTCGCGTTCGCCGTGGAAACCATGTTCATGGTTGCATTGTAGGTA
CCTTACCGTTTTGTATGTATACGCCCCGCGTCAAACCACGTTCGATTTGG
CCGAATGTACTGTCCACTAGTTTACTTTTCACTCCTGTCGTGCGCTTTTG
CCTCGCTTATGGCTATACTTGGAATTATACCTGGTACACCGCTAAGTTTG
AACCAGCAGGGGACAGTGCGTGCCCACACGTTGCCAGGTGTACTGGATGA
CGCAAGCGTATTCTTGCGTTGCCTCCGGTCCTCGAAATGGTTTGTACTCG
TACTTATCCAACGTATCTGGATAATGGTTGCAGATGTGCTGAACGATTAT
TCGGAAGGGTGGCGATCAGGGCGGCAACTACCATACGTGAACAACATGAT
TCCCTGGGTCACTCCCAAATTTGCAACATCGAGCTAGTGCCTCGGAACGG
AGCTCTGTCAAAACAACCCACAGAGATATCTTTACTACTGTCGGTTGTTC
ACAACGGATTGATCGCGCTGACTGCCACACTTCTTGAGATGTTCGCGTGA
CGTTACACGCTTCATCGCTGTGAAAATGCTCTATGAAAGGTGTTTGTTGC
CATTGCACGCCTGCGTGTAGAGGTTCAGTAGAAATAAAACATCGAATTTA
TCACT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11502:274..6628+

>mRNA_M-pyrifera_M_contig11502.3124.1 ID=mRNA_M-pyrifera_M_contig11502.3124.1|Name=mRNA_M-pyrifera_M_contig11502.3124.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig11502:274..6628+ (Macrocystis pyrifera P11B4 male)
ATGCAGGACCGTGGTGGGGTGCGGGTACGTCGCCGCATGGACAAAACGAA
GGGCGTCCCGACCGACCAGCAACCGTTCAACGAGCTGCAGGAGCTCAAGG
AAGACGTCCTCTTCGGCTGGGCCCAAGAGGACTTCAAGATGCAGGACCGT
GGTGGGGTGCGGGTACGTCGCCGCATGGACAAAACGAAGGGCGTCCCGAC
CGACCAGCAACCGTTCAACGAGCTGCAGGAGCTCAAGGAAGACGTCCTCT
TCGGCTGGGCCCAAGAGGACTTCAAGGGTCTGGTGACCCGATTGGCTCTC
ATCTACGCGGGAGCGATGGCCGTGAGGGTCTGGTGACCCGATTGGCTCTC
ATCTACGCGGGAGCGATGGCCGTGAGCATTCCGATCGGCACGACGACGTT
CCCGAATCAACTGCGCGAGGCGCTTCTGTCAGCAAACGTGGGCGCGCTGG
GCGTGCTTCTCGCATTCCGATCGGCACGACGACGTTCCCGAATCAACTGC
GCGAGGCGCTTCTGTCAGCAAACGTGGGCGCGCTGGGCGTGCTTCTCGCG
GTGGTGACACGGCTGTACAGCGGCTGGAGCTACGTTTCCATACGCCTGGA
CGCTGAAGTTGTGGAGTACGAGGAATCAGCGGTGGTGACACGGCTGTACA
GCGGCTGGAGCTACGTTTCCATACGCCTGGACGCTGAAGTTGTGGAGTAC
GAGGAATCAGGTTGGTATGATGGAAGCGAGTGGTACAAGCCGCCGGACAT
TCGGGCGAGGGACGAAATGCTCAACAATTACGAAGTCAAGCCGGCGCTCG
ATCGCCTCAAAGCGTTGGTATGATGGAAGCGAGTGGTACAAGCCGCCGGA
CATTCGGGCGAGGGACGAAATGCTCAACAATTACGAAGTCAAGCCGGCGC
TCGATCGCCTCAAAGCAATTCTCGCCGCGATCGGGGTGGGATTCATGCTG
ACCGTGGTGGGGTTCAAGATAGTGGTGCCGGATGACCCTTACGCCATGCT
GGACGATACCTACCTCAGCACCCTCAAGAGCGACGATGACGTGGCGAACG
AAGCTGCCAAGAAGAATTCTCGCCGCGATCGGGGTGGGATTCATGCTGAC
CGTGGTGGGGTTCAAGATAGTGGTGCCGGATGACCCTTACGCCATGCTGG
ACGATACCTACCTCAGCACCCTCAAGAGCGACGATGACGTGGCGAACGAA
GCTGCCAAGAAGGCTGCGGCAAAGGGCACCAACAGACCCGTTTACTGCGA
GTCGCGCTACTACCAGGCCATGGCGGGAGGCGGCCTTTGTGACTAGGCTG
CGGCAAAGGGCACCAACAGACCCGTTTACTGCGAGTCGCGCTACTACCAG
GCCATGGCGGGAGGCGGCCTTTGTGACTAG
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