mRNA_M-pyrifera_M_contig115010.3120.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A7K1ZDH2_9ACTN (SDR family oxidoreductase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZDH2_9ACTN) HSP 1 Score: 216 bits (550), Expect = 8.290e-68 Identity = 107/125 (85.60%), Postives = 119/125 (95.20%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEFYDT 375
VLIGSQASLKPV +PQ AYA+AKSALLAMAR+MA+ELGPQ IR+NTV+PTWMWGPNV+MYCEWQA+ERG+TAEEVRDEIAQGMALR MPTDADVAEAAVFFASDR+ MITGQR+LVNAGEF+DT
Sbjct: 139 VLIGSQASLKPVPAIPQFAYAAAKSALLAMARNMASELGPQSIRVNTVIPTWMWGPNVQMYCEWQASERGITAEEVRDEIAQGMALRVMPTDADVAEAAVFFASDRARMITGQRMLVNAGEFFDT 263
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A6B1EF18_9ACTN (SDR family oxidoreductase n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EF18_9ACTN) HSP 1 Score: 190 bits (482), Expect = 1.620e-57 Identity = 92/123 (74.80%), Postives = 109/123 (88.62%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEFY 369
VLIGSQAS++PV + PQS Y +AKSALL++ARD++AELGP GIR+NTVVP+WMWGPNVK YCEWQA RG+TAEEV+ EIAQGMALR MPTD+D AEAA+F AS+R+ MITGQ L+VNAGEFY
Sbjct: 138 VLIGSQASMRPVAVFPQSPYGAAKSALLSVARDLSAELGPSGIRVNTVVPSWMWGPNVKFYCEWQAGIRGITAEEVKHEIAQGMALREMPTDSDAAEAAIFLASERARMITGQTLVVNAGEFY 260
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A7K2D6L1_9ACTN (SDR family oxidoreductase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2D6L1_9ACTN) HSP 1 Score: 189 bits (479), Expect = 4.470e-57 Identity = 92/123 (74.80%), Postives = 107/123 (86.99%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEFY 369
VLIGSQAS++PV PQS Y +AKSALL++ARD+AAELGP GIR+NTVVP+WMWGPNVK+YCEWQA RG+T EEV+ EIAQGMALR MPTD+DVAEA VF AS+R+ MITGQ L+VNAG FY
Sbjct: 137 VLIGSQASMRPVAEFPQSPYGAAKSALLSLARDLAAELGPSGIRVNTVVPSWMWGPNVKLYCEWQAGTRGITVEEVKHEIAQGMALREMPTDSDVAEAVVFMASERARMITGQTLVVNAGHFY 259
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A2D8LUW5_9ACTN (Short-chain dehydrogenase n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LUW5_9ACTN) HSP 1 Score: 167 bits (422), Expect = 1.740e-48 Identity = 80/125 (64.00%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEFYDT 375
VLIGSQ+++K + +PQ Y +K+ALLA+ARD+A +LGP GIR+NTVVP+WMWGPNV+MYC+WQA+ERGV E++++E+A ALR M D DVAE+ +FF SDRS+MITGQRLLVNAGE++DT
Sbjct: 138 VLIGSQSAMKS-NPVPQGVYGPSKAALLAVARDLANDLGPDGIRVNTVVPSWMWGPNVQMYCQWQASERGVEPEDIKNELASANALRAMAADTDVAESVMFFLSDRSSMITGQRLLVNAGEYFDT 261
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A3M2G2Y4_ACTSX (SDR family oxidoreductase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G2Y4_ACTSX) HSP 1 Score: 162 bits (411), Expect = 1.400e-46 Identity = 82/123 (66.67%), Postives = 97/123 (78.86%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEFY 369
V IGSQ+SL+P + M Q AYA++K ALLA R +A ELGPQGIR+NTV+ TWMWGPNV++YC WQAAERGVT E VRDEIA MAL +P D DVAEA V+ SDR+ M+TGQ LLVNAGE +
Sbjct: 158 VFIGSQSSLRPAEEMFQVAYAASKGALLAAQRSLARELGPQGIRVNTVIATWMWGPNVELYCAWQAAERGVTPEAVRDEIASRMALGEIPRDDDVAEAVVWLLSDRARMVTGQELLVNAGEIF 280
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A6G0AB19_9ACTN (SDR family oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0AB19_9ACTN) HSP 1 Score: 138 bits (347), Expect = 3.050e-37 Identity = 70/121 (57.85%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGE 363
VLIGSQ+ L P +PQ AYA++K ALL+ +A ELGP GIR+N VVPTWMWGP V++Y +WQ++ RGV E+ E+ GM L +P D +VA+A VF SDRS MITGQ LLVNAGE
Sbjct: 136 VLIGSQSMLLPSPAVPQIAYAASKGALLSATYHLAQELGPDGIRVNMVVPTWMWGPPVELYVDWQSSARGVERHEIVSELTAGMPLGEIPADEEVADAVVFLCSDRSRMITGQSLLVNAGE 256
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A7Y3GAM6_9DELT (SDR family oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GAM6_9DELT) HSP 1 Score: 137 bits (346), Expect = 4.540e-37 Identity = 73/123 (59.35%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEFY 369
VLIGSQA P MPQ AYA+AK ALL+ MA ELGP+ IR+N V+PTWMWGP V+ Y WQ+ ER + E V+ E++ MALR +P D DVAEA +FF SDRS MITG+ L+VNAGE Y
Sbjct: 138 VLIGSQAMWLPPK-MPQIAYAAAKGALLSSMYHMADELGPKRIRVNMVIPTWMWGPPVEAYMNWQSKERKLPLETVKAEVSDQMALREIPADEDVAEAVIFFCSDRSRMITGETLMVNAGELY 259
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A8F6DVN1_9ACTN (SDR family oxidoreductase n=1 Tax=Skermania piniformis TaxID=39122 RepID=A0A8F6DVN1_9ACTN) HSP 1 Score: 135 bits (341), Expect = 2.180e-36 Identity = 71/123 (57.72%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEFY 369
VLIG+QA P +PQ+AYA++K AL A +A ELGPQ IR+NTVVPTWMWGPNV+ Y ++QA +GV EV+ IA+ MALR +P D DVA A +FFAS+ S M+TGQ L VNAGE++
Sbjct: 134 VLIGTQAMFAPS--LPQTAYAASKGALHAAMLSLAKELGPQAIRVNTVVPTWMWGPNVEAYVQFQAERKGVEPAEVQAGIARRMALREIPEDGDVANAVIFFASELSRMVTGQTLFVNAGEYF 254
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: UPI00082E7427 (SDR family oxidoreductase n=1 Tax=Aldersonia kunmingensis TaxID=408066 RepID=UPI00082E7427) HSP 1 Score: 134 bits (336), Expect = 1.390e-35 Identity = 68/123 (55.28%), Postives = 91/123 (73.98%), Query Frame = 1
Query: 1 VLIGSQASLKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEFY 369
VL+G+QA P +PQ+AYAS+K AL + +A ELGP+ IR+N VVPTWMWGPNV++Y + A +RGV+ EEV+ IA+ MALR +P D DVA + VFFASD + M+TGQ L+VN GE++
Sbjct: 139 VLVGTQAMFNPA--LPQTAYASSKGALHSAMFSLAKELGPKKIRVNMVVPTWMWGPNVEIYVQMTAKQRGVSEEEVKAGIAKKMALREIPEDGDVANSVVFFASDHARMLTGQTLIVNGGEYF 259
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Match: A0A7C7ZHH2_9DELT (SDR family oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7ZHH2_9DELT) HSP 1 Score: 132 bits (333), Expect = 3.890e-35 Identity = 70/123 (56.91%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 1 VLIGSQAS-LKPVDMMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEWQAAERGVTAEEVRDEIAQGMALRTMPTDADVAEAAVFFASDRSAMITGQRLLVNAGEF 366
VL+GSQ+ L P MPQ AYAS+K AL++ +A ELGP IR+N V+PTWMWGP V+ Y +WQ+ ERG++ + V DEI GM L +P D DVAEA +FF SDR+ MITG+ LL+NAGEF
Sbjct: 138 VLVGSQSMWLSPP--MPQIAYASSKGALVSSMYHLAEELGPDKIRVNMVIPTWMWGPPVEGYVKWQSKERGISEQAVIDEITSGMPLGEIPKDDDVAEAIIFFCSDRARMITGETLLINAGEF 258 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115010.3120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig115010.3120.1 >prot_M-pyrifera_M_contig115010.3120.1 ID=prot_M-pyrifera_M_contig115010.3120.1|Name=mRNA_M-pyrifera_M_contig115010.3120.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp MMPQSAYASAKSALLAMARDMAAELGPQGIRINTVVPTWMWGPNVKMYCEback to top mRNA from alignment at M-pyrifera_M_contig115010:32..567- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig115010.3120.1 ID=mRNA_M-pyrifera_M_contig115010.3120.1|Name=mRNA_M-pyrifera_M_contig115010.3120.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=536bp|location=Sequence derived from alignment at M-pyrifera_M_contig115010:32..567- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig115010:32..567- >mRNA_M-pyrifera_M_contig115010.3120.1 ID=mRNA_M-pyrifera_M_contig115010.3120.1|Name=mRNA_M-pyrifera_M_contig115010.3120.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig115010:32..567- (Macrocystis pyrifera P11B4 male)back to top |