mRNA_M-pyrifera_M_contig11499.3115.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE) HSP 1 Score: 222 bits (566), Expect = 3.140e-66 Identity = 110/124 (88.71%), Postives = 118/124 (95.16%), Query Frame = 1
Query: 1 LQVWLYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVYG 372
LQVWLYGMVML+EYFALIFVRARSSIVFFSRTAALSF+AFHVYFYHFQMGFF LAAW+SF MFSVKLYVLQAIELPAYTSG++S D PRAH+VELPWPTWGAALPP+WSLFIPPN S+VGVYG
Sbjct: 522 LQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFSVKLYVLQAIELPAYTSGEVSQDAPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYG 645
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A835YR56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA) HSP 1 Score: 130 bits (327), Expect = 5.400e-35 Identity = 62/123 (50.41%), Postives = 89/123 (72.36%), Query Frame = 1
Query: 1 LQVWLYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVY 369
L++ L+GM++LWEY+ L+FVR+ + I FF R L F A+H+YF+ MG+F LAA ++F ++ LY + +E+PA T G+IS + PRA +VELPWP+WGA+LPP W+LF+P NT GVY
Sbjct: 119 LEMSLFGMMLLWEYYCLVFVRSAAGIAFFPRVTMLYFTAYHMYFFMNPMGYFGLAALSTFLLVLHAMLYTVTDLEVPALTRGEISAEHPRACFVELPWPSWGASLPPTWTLFLPTNTRVRGVY 241
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A7S3Y6C3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK) HSP 1 Score: 114 bits (285), Expect = 2.570e-28 Identity = 56/123 (45.53%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 1 LQVWLYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVY 369
L+VWL+G +MLWEY+ ++F+R+R +FF R L F+ +H+YFY F G+F L A F +M L+ LQ +E PA G++S PRA Y ELPWP + L P W+LF+PP + GVY
Sbjct: 173 LEVWLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELPWPAHPSELAPEWTLFVPPAEAVRGVY 295
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK) HSP 1 Score: 114 bits (285), Expect = 2.640e-27 Identity = 56/123 (45.53%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 1 LQVWLYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVY 369
L+VWL+G +MLWEY+ ++F+R+R +FF R L F+ +H+YFY F G+F L A F +M L+ LQ +E PA G++S PRA Y ELPWP + L P W+LF+PP + GVY
Sbjct: 361 LEVWLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELPWPAHPSELAPEWTLFVPPAEAVRGVY 483
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A7S2AJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.410e-26 Identity = 52/123 (42.28%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 1 LQVWLYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVY 369
L++W+YG+VM+WEY+++I++R+ ++I F R + F+AFH Y Y GF+ +A T F M ++ L +E+PA + ++S DQPRA Y LPW W A LPP W+LF+P N+ A +Y
Sbjct: 166 LELWIYGIVMIWEYYSMIYLRSAAAIYFLPRFTLVYFIAFHFYLYGTAYGFYPVALLTMFLAMCHSLVFCLTRLEVPASSRLEVSFDQPRALYTALPWTAWSAMLPPSWTLFLPLNSRAQNIY 288
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: D8LRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD0_ECTSI) HSP 1 Score: 103 bits (256), Expect = 1.420e-23 Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = 1
Query: 214 QAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVYG 372
+AIELPAYTSG++S D PRAH+VELPWPTWGAALPP+WSLFIPPN S+VGVYG
Sbjct: 229 KAIELPAYTSGEVSQDAPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYG 281
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A7S1UFL8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFL8_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.480e-21 Identity = 50/123 (40.65%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 7 VWLYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFF--ALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVY 369
+WL+ ++M+ EY++++F+R++++I F R LS L +H+Y Y F GF+ L TS V +V LY +E A SG++S +QPR +V LP+P W A LPP+W++F+PPN ++ VY
Sbjct: 256 LWLFALIMVLEYYSMVFLRSKAAIGFAPRMLMLSLLCYHLYIYSFPFGFYRPVLLLLTS--VCVNVCLYCCVHLERQAVISGEVSFEQPRGAFVRLPYPIWQADLPPLWTVFVPPNETSTNVY 376
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A7S2SN08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 7.970e-19 Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1
Query: 13 LYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVY 369
++G+VM+ EYF++IF R+ +I FF R ++AFH+YFY GF ++A T + +Y L+ E+ A+ G +S +QPR+ Y E+P P W LPP+WS+F P N S +Y
Sbjct: 370 IFGLVMICEYFSMIFARSLLTIQFFPRVMMFYYIAFHLYFYLVPYGFTSMATITWYAACLHAMVYCLRYHEVKAFQRGRVSFEQPRSLYSEIPQPQWNMLLPPLWSMFYPLNRSQRSIY 488
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A7S0XCD7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 4.730e-18 Identity = 43/123 (34.96%), Postives = 76/123 (61.79%), Query Frame = 1
Query: 4 QVWLYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWSLFIPPNTSAVGVYG 372
++W++ ++ML EY+++I++R+R SI+ F R +++ +H+Y Y GF LA F M ++ ++ ELPAY+SG +S D PR + +PWP W A+ P ++LF P + ++ +YG
Sbjct: 254 ELWIFAIMMLLEYYSMIYLRSRGSIILFPRVILSTYMIYHIYVYLHPNGFHLLALLVMFMFMAWNMIFCVRKFELPAYSSGHVSIDAPRVLHNRVPWPMWSIAIAPDFTLFWPLDHQSMTIYG 376
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Match: A0A7R9YBE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBE7_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 3.650e-12 Identity = 36/108 (33.33%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 7 VWLYGMVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWTSFFVMFSVKLYVLQAIELPAYTSGDISHDQPRAHYVELPWPTWGAALPPIWS 330
+WL+ +VM+ EY++++F+R++++I F R L +H+Y Y F GFF +E A SG++S +QPR + LP+P W LPP+WS
Sbjct: 24 LWLFALVMVLEYYSMVFLRSKAAIGFTPRMLMGCLLCYHLYIYSFPAGFFXXXXXXXXXXXXXXXXXSCFRLEKAALLSGEVSFEQPRGAFFRLPYPVWQGDLPPLWS 131 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11499.3115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11499.3115.1 >prot_M-pyrifera_M_contig11499.3115.1 ID=prot_M-pyrifera_M_contig11499.3115.1|Name=mRNA_M-pyrifera_M_contig11499.3115.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp MVMLWEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFALAAWback to top mRNA from alignment at M-pyrifera_M_contig11499:819..2071- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11499.3115.1 ID=mRNA_M-pyrifera_M_contig11499.3115.1|Name=mRNA_M-pyrifera_M_contig11499.3115.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1253bp|location=Sequence derived from alignment at M-pyrifera_M_contig11499:819..2071- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11499:819..2071- >mRNA_M-pyrifera_M_contig11499.3115.1 ID=mRNA_M-pyrifera_M_contig11499.3115.1|Name=mRNA_M-pyrifera_M_contig11499.3115.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig11499:819..2071- (Macrocystis pyrifera P11B4 male)back to top |