mRNA_M-pyrifera_M_contig101488.311.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A2E7K894_9PLAN (Uncharacterized protein (Fragment) n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K894_9PLAN) HSP 1 Score: 372 bits (955), Expect = 7.680e-117 Identity = 205/212 (96.70%), Postives = 206/212 (97.17%), Query Frame = 1 Query: 1 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLL 636 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLS+QNSKLVGNMTGTPEADGYGAGIYQLQ XXXXXX NQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLL Sbjct: 81 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSVQNSKLVGNMTGTPEADGYGAGIYQLQGTLAXXXXXXTGNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLL 292
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A517PXR0_9PLAN (Probable pectate lyase C n=2 Tax=Bacteria TaxID=2 RepID=A0A517PXR0_9PLAN) HSP 1 Score: 372 bits (956), Expect = 1.320e-116 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1 Query: 1 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLL 636 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLL Sbjct: 81 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLL 292
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A518IKJ4_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IKJ4_9PLAN) HSP 1 Score: 185 bits (470), Expect = 2.680e-50 Identity = 107/206 (51.94%), Postives = 140/206 (67.96%), Query Frame = 1 Query: 10 DTITFDASL-AGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHA 624 + I FDASL +GQ+IVL+ E+ I+D+LT+ GLG+D LTLDGNGDS+IF+++ G + I+V+ISGLT TNG+ GGAI+++ETLSI DS SGN+A+ GG I N+ GDLS+ NSKL+GN TGT E DG G I N+A+G GG +YI S + +SHS FS+N A++GGAI N L VE FTEN A Sbjct: 672 ERIEFDASLLSGQTIVLTDEILISDNLTIVGLGADQLTLDGNGDSRIFRINYGSLSTKISVDISGLTFTNGTAATGGAIYSRETLSISDSVFSGNSATQAGGGIFNFSGDLSVVNSKLIGNTTGTSEDDGSGGAISHSSGMLTVDASEFTDNEAIGAGGAIYISSSVEARISHSTFSTNVANTGGAISKGNGLLIVEDCDFTENQA 877
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A517VWA5_9PLAN (Probable pectate lyase C n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VWA5_9PLAN) HSP 1 Score: 169 bits (427), Expect = 1.590e-44 Identity = 102/203 (50.25%), Postives = 130/203 (64.04%), Query Frame = 1 Query: 4 GADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFT 612 GADTI+F+ SL GQ+IVL ELQITDDLT+TGLG+ LT++GN +S+IF++DD I VEI GLTLTNGS GGAI+N E+LS+IDSTLS NTA+ G AI N G LS+ NS+L N G +G G GIYQ+ N+A GG + + F VS+S F N+A SGGAI N+ L V+ + F+ Sbjct: 678 GADTISFNNSLTGQTIVLLDELQITDDLTITGLGASQLTINGNTNSRIFKIDDSRPATMIDVEIRGLTLTNGSAATGGAIYNLESLSVIDSTLSRNTATQQGAAIYNDRGILSVDNSRLQENKVGEGNLEGQGGGIYQIFGTLTVTQTEFIGNEASSSGGAINSSWASSFSVSNSTFDLNNARSGGAIRNSGTQLIVQNSFFS 880
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A517X024_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X024_9PLAN) HSP 1 Score: 154 bits (388), Expect = 2.600e-39 Identity = 103/234 (44.02%), Postives = 131/234 (55.98%), Query Frame = 1 Query: 1 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNG---------SGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDL-----SIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLLGGAIYTNK 660 AGADTITFDA+LAGQSIVL+ EL+ITDDLT+TGLG D LT+DGNG+S+IF + D F I+VEI LTLTNG S D GGAI + E L + ++ L+GN A GG I Y G+L +I S+ +GN +A GGG+Y LV++S F SN A GAIYN + P+T+ ++ F+ N A LGGAIY K Sbjct: 82 AGADTITFDANLAGQSIVLTDELKITDDLTITGLGEDQLTIDGNGNSRIFHIRDASFTTYISVEIKNLTLTNGNSIGDPGVFSNDNGGAILSYEKLIVENTILTGNMAKF-GGGIYQYNGNLDHATLTIIQSEFIGN-------------------------------EASSSGGGIYSDAVSSLLVANSAFESNKAKKAGAIYNQSGPMTILESSFSNNQALNSLGGAIYHQK 283
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A517WLV5_9PLAN (Probable pectate lyase C n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WLV5_9PLAN) HSP 1 Score: 147 bits (371), Expect = 4.890e-37 Identity = 105/224 (46.88%), Postives = 136/224 (60.71%), Query Frame = 1 Query: 4 GADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATG--------LLGGAIY 651 GADTITFD+SLAGQ++ L++++ I+DDLT+ GLG D LTLDG G S+IFQ+ DG I VEISG+TLTNG GGAI N+E LS++D+TL+ N + +GGAI N G ++++NS L GNM + XXXXXXXXXXXX A GGG+Y VS S F+ N SGG IY+ L + + F+EN GGA+Y Sbjct: 82 GADTITFDSSLAGQTVSLTSQISISDDLTIVGLGPDQLTLDGKGSSRIFQIYDGSSGTTIDVEISGITLTNGYATSGGAIHNREQLSLVDTTLANNISIGSGGAIYNDGGSVTVENSTLNGNMALGDTSPXXXXXXXXXXXXXXXXXXXXXXXXADKTGGGIYSGMDGDLTVSQSTFARNQGQSGGGIYSFRTALNIHDSQFSENRGIADPEFPTQASEGGAVY 305
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A355GDD1_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GDD1_9PLAN) HSP 1 Score: 140 bits (353), Expect = 3.870e-36 Identity = 102/241 (42.32%), Postives = 128/241 (53.11%), Query Frame = 1 Query: 1 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNM------------------------TGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLLGGAIY 651 AGADTI+FDA+LAG+SIVLSTELQITDDLT+TGLG+D LTLDGNGDS+IF +++ + + AI VEI+GLTLTNGS D G AI + E+LS+ S N S GGAI + LSI +S+ + N T T DG G I + N A LGG ++ Q SGG I + L V + FTEN AT GGA++ Sbjct: 29 AGADTISFDAALAGESIVLSTELQITDDLTITGLGADRLTLDGNGDSRIFNLNNWIADEAIIVEITGLTLTNGSADSGAAIISYESLSLSGMVFSDNIGSSRGGAIYSDDWHLSISDSEFLRNTSRSXXXXXXXXAFLNVERVTFTGNTVTGNRDGTGGAITNIAGSMRVTNSFFSQNTASRLGGAIHNSQYSSAQXXXXXXXXXXXQSGGGISSLEAFLNVADSTFTENQATEN-GGAVF 268
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A6C9X8_9PLAN (Probable pectate lyase C n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6C9X8_9PLAN) HSP 1 Score: 143 bits (361), Expect = 1.070e-35 Identity = 99/242 (40.91%), Postives = 135/242 (55.79%), Query Frame = 1 Query: 4 GADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDLSIQNSKLVGNM------------------------TGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLLGGAIYTN 657 GADTI+FD++LAGQ+IVL+ EL I+DDLT+TGLG+D LT+DGNGDS+IF +++G+ + AI VEI+GLTLTNG D G AI + E+LS+ + S N S +GGAI + LSI +S+ + N T T G G I + N A LGG ++ Q +S++ F N A SGG I + L V ++ FTEN AT GGA++ N Sbjct: 83 GADTISFDSALAGQTIVLTDELLISDDLTITGLGADQLTIDGNGDSRIFNLNNGIADEAIIVEITGLTLTNGFADSGAAIISYESLSLSEMVFSDNIGSSSGGAIYSDDWHLSISDSEFLRNTSRXXXXXXXXXXXXXXDRVTFTDNTVTGNRYGTGGAITNIAGSMWVTNSFFSQNTASRLGGAIHNSQYSSAQISNTVFLQNRAQSGGGISSLEAFLNVAESTFTENQATEN-GGAVFVN 323
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A517VMF7_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VMF7_9PLAN) HSP 1 Score: 143 bits (361), Expect = 1.090e-35 Identity = 75/99 (75.76%), Postives = 90/99 (90.91%), Query Frame = 1 Query: 1 AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTA 297 AGADTI+FDA+LAG++IVLSTELQITDDLT+TGLG+D LTLDGN DS+IF++DDGV ++ I VEISGLTLTNGS + GGAI+N E LSI+DSTL+GNTA Sbjct: 82 AGADTISFDAALAGETIVLSTELQITDDLTITGLGADQLTLDGNADSRIFRIDDGVVSSDINVEISGLTLTNGSAENGGAIYNLEMLSIVDSTLTGNTA 180
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Match: A0A517QFD7_9PLAN (Polymorphic membrane protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QFD7_9PLAN) HSP 1 Score: 131 bits (330), Expect = 2.210e-34 Identity = 92/223 (41.26%), Postives = 121/223 (54.26%), Query Frame = 1 Query: 4 GADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFQVDDGVFNNAITVEISGLTLTNGSGDRGGAIFNQETLSIIDSTLSGNTASLNGGAISNYYGDL-----SIQNSKLVGNMTGTPEADGYGAGIYQLQXXXXXXXXXXXXNQALGLGGGVYILQSDQFLVSHSQFSSNSAHSGGAIYNNNNPLTVEQTLFTENHATGLLGGAIYTN 657 GADTITFDASLAGQ+IVL EL I+DDLT+TGLG+D LT+DGNGDS+IF + D + ITVE+ LTLTNG D GGAI + E L I+ Y G+L ++ +S+ +GN EA YG GI+ GV+ L +S + F +N A SGGAIYN + P+T++++ F+ N A G Y N Sbjct: 38 GADTITFDASLAGQTIVLGDELSISDDLTITGLGADQLTIDGNGDSRIFFIKDASYLTYITVELENLTLTNGKSDDGGAILSYEKL-ILKDXXXXXXXXXXXXXXYQYNGNLDDATLTVLHSEFIGN-----EASSYGGGIF---------------------AEGVWSLD-----ISSTTFDTNKALSGGAIYNKSGPMTIQESSFSGNQARGSFKTQNYVN 228 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101488.311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101488.311.1 >prot_M-pyrifera_M_contig101488.311.1 ID=prot_M-pyrifera_M_contig101488.311.1|Name=mRNA_M-pyrifera_M_contig101488.311.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=222bp AGADTITFDASLAGQSIVLSTELQITDDLTVTGLGSDLLTLDGNGDSQIFback to top mRNA from alignment at M-pyrifera_M_contig101488:3..668+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101488.311.1 ID=mRNA_M-pyrifera_M_contig101488.311.1|Name=mRNA_M-pyrifera_M_contig101488.311.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig101488:3..668+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101488:3..668+ >mRNA_M-pyrifera_M_contig101488.311.1 ID=mRNA_M-pyrifera_M_contig101488.311.1|Name=mRNA_M-pyrifera_M_contig101488.311.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1332bp|location=Sequence derived from alignment at M-pyrifera_M_contig101488:3..668+ (Macrocystis pyrifera P11B4 male)back to top |