prot_M-pyrifera_M_contig114959.3105.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114959.3105.1
Unique Nameprot_M-pyrifera_M_contig114959.3105.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: UPI000C9C8876 (DeoR/GlpR family DNA-binding transcription regulator n=1 Tax=Pseudovibrio exalbescens TaxID=197461 RepID=UPI000C9C8876)

HSP 1 Score: 59.7 bits (143), Expect = 2.390e-10
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISGR 51
            MDFD+ K+AVKKAA+  SD+ +LLAT+SKFGRT    +  ++ FDEVISG+
Sbjct:   39 MDFDLSKIAVKKAALAISDRKLLLATQSKFGRTALSTVAMISEFDEVISGQ 89          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: A0A1U7JF87_9HYPH (HTH deoR-type domain-containing protein n=3 Tax=Pseudovibrio exalbescens TaxID=197461 RepID=A0A1U7JF87_9HYPH)

HSP 1 Score: 59.7 bits (143), Expect = 2.440e-9
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISGR 51
            MDFD+ K+AVKKAA+  SD+ +LLAT+SKFGRT    +  ++ FDEVISG+
Sbjct:  176 MDFDLSKIAVKKAALAISDRKLLLATQSKFGRTALSTVAMISEFDEVISGQ 226          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: UPI001FCC555F (DeoR/GlpR family DNA-binding transcription regulator n=1 Tax=Labrenzia sp. 011 TaxID=2171494 RepID=UPI001FCC555F)

HSP 1 Score: 53.1 bits (126), Expect = 5.330e-7
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISG 50
            MDFD+ K+AVKKAAM  +D+ +LLAT SKF RT    I  L+ F++VI G
Sbjct:  135 MDFDLSKIAVKKAAMAAADENLLLATPSKFNRTALSTIAMLSDFNQVIDG 184          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: UPI001E3BF09D (DeoR/GlpR family DNA-binding transcription regulator n=1 Tax=Tropicimonas sp. IMCC34011 TaxID=2248759 RepID=UPI001E3BF09D)

HSP 1 Score: 53.1 bits (126), Expect = 6.670e-7
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISG 50
            MDFD+ K+AVKKAAM  + +  L+AT SKFGRT      D++ FD VI G
Sbjct:  174 MDFDLSKIAVKKAAMNAATRKFLIATPSKFGRTALSAFADVSDFDAVIDG 223          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: A0A5D0W0L3_9RHOB (DeoR/GlpR transcriptional regulator n=1 Tax=Rhodobacterales bacterium TaxID=1948890 RepID=A0A5D0W0L3_9RHOB)

HSP 1 Score: 53.1 bits (126), Expect = 7.450e-7
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISG 50
            MDFD+ K+AVKKAAM  + + +LLAT SKFGR     I  L+ FD VI G
Sbjct:  190 MDFDLSKIAVKKAAMAAASERLLLATPSKFGRAALSTIAMLSEFDHVIDG 239          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: A0A2T7HFC6_9HYPH (DeoR/GlpR transcriptional regulator n=1 Tax=Labrenzia sp. 011 TaxID=2171494 RepID=A0A2T7HFC6_9HYPH)

HSP 1 Score: 53.1 bits (126), Expect = 7.620e-7
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISG 50
            MDFD+ K+AVKKAAM  +D+ +LLAT SKF RT    I  L+ F++VI G
Sbjct:  190 MDFDLSKIAVKKAAMAAADENLLLATPSKFNRTALSTIAMLSDFNQVIDG 239          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: UPI00146E90A9 (DeoR/GlpR family DNA-binding transcription regulator n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI00146E90A9)

HSP 1 Score: 52.4 bits (124), Expect = 1.310e-6
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISGR 51
            MDFD+ K+AVK+AAM  + + +LLAT  KFGR     I  L  FD VI GR
Sbjct:  186 MDFDLSKIAVKRAAMASATRTMLLATPDKFGRAALATIAPLQDFDHVIDGR 236          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: A0A1M7NR24_9HYPH (Transcriptional regulator, DeoR family n=1 Tax=Roseibium suaedae TaxID=735517 RepID=A0A1M7NR24_9HYPH)

HSP 1 Score: 52.4 bits (124), Expect = 1.320e-6
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISG 50
            MDF++ K+A+KKAAM  + + +LLAT SKFGRT      D++ FD VI G
Sbjct:  190 MDFNLSKIAIKKAAMAAATRKLLLATPSKFGRTAVSAFADVSDFDAVIDG 239          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: UPI001BCD1567 (DeoR/GlpR family DNA-binding transcription regulator n=2 Tax=Roseibium polysiphoniae TaxID=2571221 RepID=UPI001BCD1567)

HSP 1 Score: 52.0 bits (123), Expect = 1.890e-6
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISGR 51
            MDFD+ K+AVKKAAM  ++ ++LLAT SKFGRT    +  L  F  V++G+
Sbjct:  190 MDFDMSKIAVKKAAMAAAENSLLLATPSKFGRTALSTVAALDDFTHVLTGQ 240          
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Match: UPI000DDFC2C6 (DeoR/GlpR family DNA-binding transcription regulator n=5 Tax=Proteobacteria TaxID=1224 RepID=UPI000DDFC2C6)

HSP 1 Score: 51.6 bits (122), Expect = 2.530e-6
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISG 50
            MDFD+ K+AVKKAAM  + + +L+A  SKFGRT      +++ FD V+ G
Sbjct:  190 MDFDLSKIAVKKAAMKAASRKLLIAAPSKFGRTALSAFAEISEFDAVVDG 239          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114959.3105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
UPI000C9C88762.390e-1058.82DeoR/GlpR family DNA-binding transcription regulat... [more]
A0A1U7JF87_9HYPH2.440e-958.82HTH deoR-type domain-containing protein n=3 Tax=Ps... [more]
UPI001FCC555F5.330e-756.00DeoR/GlpR family DNA-binding transcription regulat... [more]
UPI001E3BF09D6.670e-754.00DeoR/GlpR family DNA-binding transcription regulat... [more]
A0A5D0W0L3_9RHOB7.450e-756.00DeoR/GlpR transcriptional regulator n=1 Tax=Rhodob... [more]
A0A2T7HFC6_9HYPH7.620e-756.00DeoR/GlpR transcriptional regulator n=1 Tax=Labren... [more]
UPI00146E90A91.310e-652.94DeoR/GlpR family DNA-binding transcription regulat... [more]
A0A1M7NR24_9HYPH1.320e-652.00Transcriptional regulator, DeoR family n=1 Tax=Ros... [more]
UPI001BCD15671.890e-650.98DeoR/GlpR family DNA-binding transcription regulat... [more]
UPI000DDFC2C62.530e-648.00DeoR/GlpR family DNA-binding transcription regulat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014036DeoR C-terminal sensor domainPFAMPF00455DeoRCcoord: 1..50
e-value: 1.3E-8
score: 35.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114959contigM-pyrifera_M_contig114959:395..550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114959.3105.1mRNA_M-pyrifera_M_contig114959.3105.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114959 395..568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114959.3105.1 ID=prot_M-pyrifera_M_contig114959.3105.1|Name=mRNA_M-pyrifera_M_contig114959.3105.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
MDFDVRKVAVKKAAMMGSDKAVLLATKSKFGRTGRFKINDLAAFDEVISG
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014036DeoR_C