mRNA_M-pyrifera_M_contig11486.3090.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11486.3090.1
Unique NamemRNA_M-pyrifera_M_contig11486.3090.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11486.3090.1 vs. uniprot
Match: D7FPP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP5_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 8.100e-133
Identity = 189/302 (62.58%), Postives = 237/302 (78.48%), Query Frame = 1 
Query:    1 QPRFSLLKTADLRGLNLGAMGSRPDLLVTLFDHCKHLTTLNLWNTYVQDERLPQPDSAVEELIAENLPGVLHLALEIDASNKGLKLLLKGCRQLRSLHIGTRSNRRGVRIGEYPTDFGMKAFTTLGAPNLKVLSLVDKINIGATGLRCVLDASSCPQLHTLILTKVSRVNDRCLKDISPNMGRVTSLTVDQCEAKPTTVQFVVSKCPQLTSLVFCAHNGALEHPQNGRALFNFLLAQGSENLVKVDVQQPRVDPSRTSDIDAPQWLSEDRAFYNTVRDCVRPRIVIGQAETADERIAPFMAG 906
            QPRFSLLKT D++GLNLGAMGS PDLLVTLF+ C+H+TTLNLW TYV+DERLPQP  +VE +IA++LPGV HLALE+DASN+GL++LL+GC +L+SLHIG+RSN+ G  I  YP D GMKAFT +GAP L+ L+LVDK+NIGA GLRC+L+ S+CP+L TL L +  RVND CLK I+P MGR+TSLT+DQC  KP+TVQF++ KCP+LTS+V    +G L+ PQ+GRAL  +LLAQG   L K++VQ+     S   ++  P WL +D     TV + + PRIVIG AETADERIAPFMAG
Sbjct:   81 QPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVHHLALEVDASNRGLRVLLEGCTRLKSLHIGSRSNQAGDSISMYPNDLGMKAFTAVGAPYLETLTLVDKVNIGAAGLRCLLNPSACPRLRTLTLVRTGRVNDHCLKAIAPAMGRLTSLTLDQCPVKPSTVQFILDKCPELTSMVVSTQHGLLQQPQDGRALLEYLLAQGPSRLSKIEVQRLSARGSVLGNV--PYWLVQDPGLCATVLEWISPRIVIGPAETADERIAPFMAG 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig11486.3090.1 vs. uniprot
Match: A0A6H5LCS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCS2_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 1.950e-125
Identity = 186/302 (61.59%), Postives = 229/302 (75.83%), Query Frame = 1 
Query:    1 QPRFSLLKTADLRGLNLGAMGSRPDLLVTLFDHCKHLTTLNLWNTYVQDERLPQPDSAVEELIAENLPGVLHLALEIDASNKGLKLLLKGCRQLRSLHIGTRSNRRGVRIGEYPTDFGMKAFTTLGAPNLKVLSLVDKINIGATGLRCVLDASSCPQLHTLILTKVSRVNDRCLKDISPNMGRVTSLTVDQCEAKPTTVQFVVSKCPQLTSLVFCAHNGALEHPQNGRALFNFLLAQGSENLVKVDVQQPRVDPSRTSDIDAPQWLSEDRAFYNTVRDCVRPRIVIGQAETADERIAPFMAG 906
            QPRFSLLKT D++GLNLGAMGS PDLLVTLF+ C+H+TTLNLW TYV+DERLPQP  +VE +IA++LPGV HLALE+D SN+GLK+LL+GC +L+SLHIG+RSNR G  I  YP D GMKAFTT+GAP L+ L+LVDK NIGA GLRC+LD S+CP+L  L L +  RVN+ CLK I+P MGR+TSLT+DQC   P+TVQF++ KCP+LTS+V    +G L+ PQ GRAL  +LLAQG   L K++VQ+     S   ++  P WL +D     TV     PRIV+G AET DERIAPFM G
Sbjct:  299 QPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVRHLALEVDDSNRGLKVLLEGCTRLKSLHIGSRSNRAGDSISMYPNDLGMKAFTTVGAPYLETLTLVDKFNIGAAGLRCLLDPSACPRLRKLTLVRTGRVNNHCLKAIAPAMGRLTSLTLDQCLVDPSTVQFILDKCPELTSIVVSTQHGLLQQPQGGRALLEYLLAQGPSKLSKIEVQRLSARGSVLGNV--PHWLVQDPGLCATVLGWNSPRIVLGPAETVDERIAPFMVG 598
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11486.3090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPP5_ECTSI8.100e-13362.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCS2_9PHAE1.950e-12561.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11486contigM-pyrifera_M_contig11486:2195..9692 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size921
Cds size921
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815664.5331898-CDS-M-pyrifera_M_contig11486:2194..24401622815664.5331898-CDS-M-pyrifera_M_contig11486:2194..2440Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 2195..2440 -
1692277511.2852013-CDS-M-pyrifera_M_contig11486:2194..24401692277511.2852013-CDS-M-pyrifera_M_contig11486:2194..2440Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 2195..2440 -
1622815664.5433393-CDS-M-pyrifera_M_contig11486:3352..35021622815664.5433393-CDS-M-pyrifera_M_contig11486:3352..3502Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 3353..3502 -
1692277511.2948453-CDS-M-pyrifera_M_contig11486:3352..35021692277511.2948453-CDS-M-pyrifera_M_contig11486:3352..3502Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 3353..3502 -
1622815664.5550592-CDS-M-pyrifera_M_contig11486:4645..47561622815664.5550592-CDS-M-pyrifera_M_contig11486:4645..4756Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 4646..4756 -
1692277511.3024547-CDS-M-pyrifera_M_contig11486:4645..47561692277511.3024547-CDS-M-pyrifera_M_contig11486:4645..4756Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 4646..4756 -
1622815664.566608-CDS-M-pyrifera_M_contig11486:6203..63121622815664.566608-CDS-M-pyrifera_M_contig11486:6203..6312Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 6204..6312 -
1692277511.310043-CDS-M-pyrifera_M_contig11486:6203..63121692277511.310043-CDS-M-pyrifera_M_contig11486:6203..6312Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 6204..6312 -
1622815664.5771213-CDS-M-pyrifera_M_contig11486:6880..69801622815664.5771213-CDS-M-pyrifera_M_contig11486:6880..6980Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 6881..6980 -
1692277511.3179038-CDS-M-pyrifera_M_contig11486:6880..69801692277511.3179038-CDS-M-pyrifera_M_contig11486:6880..6980Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 6881..6980 -
1622815664.5874202-CDS-M-pyrifera_M_contig11486:7735..77961622815664.5874202-CDS-M-pyrifera_M_contig11486:7735..7796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 7736..7796 -
1692277511.3257923-CDS-M-pyrifera_M_contig11486:7735..77961692277511.3257923-CDS-M-pyrifera_M_contig11486:7735..7796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 7736..7796 -
1622815664.5971057-CDS-M-pyrifera_M_contig11486:9548..96921622815664.5971057-CDS-M-pyrifera_M_contig11486:9548..9692Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 9549..9692 -
1692277511.3333757-CDS-M-pyrifera_M_contig11486:9548..96921692277511.3333757-CDS-M-pyrifera_M_contig11486:9548..9692Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11486 9549..9692 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11486.3090.1prot_M-pyrifera_M_contig11486.3090.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11486 2195..9692 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11486.3090.1

>prot_M-pyrifera_M_contig11486.3090.1 ID=prot_M-pyrifera_M_contig11486.3090.1|Name=mRNA_M-pyrifera_M_contig11486.3090.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=307bp
QPRFSLLKTADLRGLNLGAMGSRPDLLVTLFDHCKHLTTLNLWNTYVQDE
RLPQPDSAVEELIAENLPGVLHLALEIDASNKGLKLLLKGCRQLRSLHIG
TRSNRRGVRIGEYPTDFGMKAFTTLGAPNLKVLSLVDKINIGATGLRCVL
DASSCPQLHTLILTKVSRVNDRCLKDISPNMGRVTSLTVDQCEAKPTTVQ
FVVSKCPQLTSLVFCAHNGALEHPQNGRALFNFLLAQGSENLVKVDVQQP
RVDPSRTSDIDAPQWLSEDRAFYNTVRDCVRPRIVIGQAETADERIAPFM
AGGVDV*
back to top

mRNA from alignment at M-pyrifera_M_contig11486:2195..9692-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11486.3090.1 ID=mRNA_M-pyrifera_M_contig11486.3090.1|Name=mRNA_M-pyrifera_M_contig11486.3090.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7498bp|location=Sequence derived from alignment at M-pyrifera_M_contig11486:2195..9692- (Macrocystis pyrifera P11B4 male)
CAGCCGAGATTCTCGCTGCTTAAGACCGCGGACCTGCGAGGACTCAACCT
GGGCGCAATGGGGTCCAGGCCCGACCTGCTGGTGACCCTCTTCGACCACT
GCAAGCACCTCACCACGCTTAACCTCTGGAACACTTACGTCCAAGTGAGT
CGATGCAGTTGGCGAATACCATCGAACGTGCGGTGCGGCATGCCCTTGTG
TCAACAATAGCCAGCCGTTTACTTGGTGCCCATAGTTTTTTAGTTGTGGT
TTTGTTTAGAAAGAGTTTTCTGCGTCGTGGAAAACCCGTGGTCGATCGGT
CACGTTATCGAAGCTCGTCACGTCACTTTTCGGAAAAAAAAACTGAGATC
TTCAATTTCGCCGTGGATGCTGATTTTCGGCGTTGCCTGGGCTGGTCCGA
GCGAAACGCCTGGAAGGCGTTCGTGGGGGCAAGTGCGCGGTGTGCCTCTG
CTATCGTAACGGTGTTGCTTAGATTACACGAAACGGAATACAGTCGCCAA
GGTCGGTGGGTCGGTGGGTGGGTGGGTATGAGATACCAGTATGTGTAATA
AGAATGACGGTTCGTCGCCTAAAAATTAGCCAACGTAGTCCACACTACAA
ACTAGAATGTCATTATTTCAGTAAACGTTTTTGGAGAGTACGGTTGACGA
ACACAAAGAGCCGCGCATATCGTGCCCTCGTGTCCTTGACACTTTTGCGA
CTTTTTTTGTGATAGTTATCCTACACTATTCCCAAGCAGTTTGTTAAATT
AGAACGTGGGTGCAGTTCGAAAGGGCTGAAGTCGTGGCTTGGTTAGTTGC
GTCCAGCGAAATGTCTTCGTGTGAAAGTGTGTACGGTTGATAAAACCCAA
GCGTGAGGTGTGCCTGGTATTGTAGGCGTTGCTTAGATTGGTTCCGACGA
GCGGGTGTCGATACAGGGGTTTCGAACGTTCAGAGGCTGTAACTGTTCCT
TTTTTACTGGGCTTCGGGTGCCGCCGCTTGGTATCTGGGAGACATTCTTG
GACGTATTTTAGTAACGATACGCTTGACGAATACCAGCAACTTTAGTGCG
CGGCGTGCCCTGTTGTCACTAACGTATCGCTGGGTTTGGTTATCGCGAAA
CGTCTTGAAATATCGCGCGGAGACGGGCGGGCGCGAGCAAGCGTGCGGCG
CGGCATGCCTTGTCTGTCAACGAAGTTTTGCTCGGATTGGTCTCAGTGAA
ATGTCTGCACGTTTTTCGTGGAGATGAAGTTGACGAACGCACACGGGCAA
CGTACCTGATATCTGGGTAGTCGTCGCTTGGATTAGTTCTAGCGAAGTAT
TTGGAAGATTTATTGTAAGGTACAGGTGACGAACACACGGTGTTCATTCC
AGCGATTTTGATGAGGCTGATGCTACTGAAGATGGTATTAACGATGATGA
TGTTGATAAGGATGATGGTGATTGATGATGACGATGATGATATAGTGGTA
GTGGCGTCGATGGTGATGGTGATGGTATTGATGAGGATGATGATAGTGAA
AACGATGATGGCGATGATGATTGTGATTATGATTGTGGTGATGATTCTCG
TGGTGGTGTTGGTGGCGATGATGATGATGATGGTCAGGATGATGACGCTG
ATGGTGGTGGTGCCGACGGCGATGGTGACGCATTCACATTTGCTCATTCT
TCTGAAATTTAGCCCGTGTCCACAAAACCTATCAATTGCTCACTGCCCCC
AGTGGCTCATCTATTCCGCAGTTTTCAAATGTGGCCCGTGGCTGCAAATC
TGCTGGTGCGAAATATGAATAGCCCGTTACCCCCTGTAGCTCATCGAGTG
AGCAAGTGTCAGCCATGCCTGACCCCCCCCCCGCCCAACCCCCCCGATAC
GCCTCTGCGCGCTGATACGACAACGTGAATCACGTGCTCGCTGCAGGATG
AGAGGTTGCCGCAGCCCGATTCTGCGGTGGAGGAGCTCATCGCAGAGAAC
CTTCCAGGTTCGTTTAGTGGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGG
CGACGGTGTTGGTGTTGATAGTGATAGTAGTGGTGGTTGTTGCGGTGGTG
TTGACAGTGGTGTTGAGAGTGGTGTTGGTGACAGTGGTGCTGGCGATGGT
GGTGGTCTTGGTGGTGGGGATGGTGTTGTTTATGTCTGTTGTTGGTGGTG
ATGTATGTGGTGGTGGTCGTGGTGGTGCTGCTGTTGCTATTGCTGTTGCT
GTTGCTGCTGTTGTGAGGAATCGACTGTCGGTAATATGTGTTTTGATAGC
AACACATACACTTGCAGTTGTGTTTTGGCGACACTACATCAATCTCTGCT
CGTCGTGTTTTGATGAGACCTACAAGCCGTAGTCTGTTTTGTGACTACAG
CCTAAATTCTAGGATAATTAACTATCGTGAGCGCTGGTTCTACGAGATAC
TGAGGACAGTAACCTAATGTTGATAGCAGCTTCGTGGCCATGGGACAGAT
TTCAAAGCATAATCTACATCACAATAATATTCGTCATCATATAATATCAG
TATTAATAGTCGCAATTGTGGCCTGTGGCTAGATTTCAGGAAAGTCTGCC
GATGTGAGAACATGATCTTCATATTAATAGTCACACTCGAAGTTGTGGTC
ATGGGCTAGATTTCACGAAAATCACATCTTTGTGTTTTTCGTCGCTGGTT
GGTCGCGGTGTTTGCATCTCGCGGCCTTCGTCGGCGGGGCGTGCTTGGCG
TTCTATCCTCAGGAGTGCTCCACTTGGCTTTGGAAATCGACGCGTCTAAC
AAGGGCTTGAAGCTGCTGCTGAAAGGCTGCCGACAGCTTCGCAGCCTCCA
CATCGGCACCAGGTGGACTTTACTTCTAAAGATTATTCGGTCTTTGAGTT
GGCCTGTGAACTAAGCCAACTAAGTGACATAGCATGTTATCAATTTTATA
ACTAAGGGGTAAACACTTGCAGGCAGCAGCCATAAACGCGCCAGCCAGAT
GCGAAGAATACACGTTATTTTTGGCGGCCAAGTGAGTATTATAACTACAG
CAGTAGTCCACGAGCTATGGTTATACAACTCACCCTATTAATAATTATCG
TGCTTCTTTCGCGGGATATTTAGTCGGGGGGGGGGGGTTACTTCCTTACA
TACATTATTACATTATAGTATTGTAACCAAGAAGAGGTGCGCTGAGTGAG
TACTCTATCAGTTATCCCGCGTTGCACATCAACCTGGCAGAGGGATGCGA
TCATATTGATGAACGGCGGTGATGATACTGATGCTACGATCTAGGCCTGC
TGTAGCTTATCGTCAACTACCGCTCTGGTCGATGATGATTTTTTTTTTTC
GCCTTGCGATATATTTCCTACTGCTGGTGCTGTTGCTGGTGCTGTTGCTG
TTCCTGCTGCTGCTGTTGCTGTTGCTGCAGGTCCAACCGGAGGGGGGTTA
GGATCGGCGAGTACCCGACCGATTTCGGCATGAAAGCCTTCACTACATTG
GGAGCACCCAACCTGAAAGTACTTTCTCTGGTTGACAAGGTATGTTCATT
GTCTAGAGCAAAAAAACGAAAGCATGGCTTGTTTTTTACGCTCTCGTCGT
GCAAGCGTATGGACTTTCAACGATGACACAATTGCCTGTTTGAAAACTGG
TTTAGCCCCACCCCCCCCATACGTAGCCGAGGCCATTGCCGGCAAGGGTG
TCATGTTCGACGCAACCTCCCTAGTATTAAAGAAACGTTTCACACATCAG
ATACATCAGGTACATTATATCCACACTTAAGCATCTAGATCATCTGGGGC
AGACGAATGCCTGACCCGTATGGTCTACTTACTGTACCTCATGCTTCCGT
GTGGGAGCGGTACAGTATGGTATGATATGGTATGGTATGGTATGGTATGT
ACATATCTACTGCTGTAGCACATGTTTTCGATCTGGTTTAATTGTACGAT
ACATACCGGTATGTACAGATCCTGCAGAACATATACATCATACTTGTATC
GGCTGATGTAGGGTCGATCTGATCTGATCTAATATCTATCTATACCGTGA
TCTATCTGTTCGAGCTGTGGAACGTTTGCGATATCTGGTAGGTGTATCGA
ACTACCCCTGTGTGTGGTGAAGCTCTAAAATTCCTTTGATCAACGTCATG
CCACGTCATACCTGAGTACCTGGTAGGTACACCATACTGTCTGTGCCGGT
ATACCGTACAACACGCAAGATACCACAGTGCACCCCTTGGACGGGTTTCC
AAGCTGGTGCTTCTCGGCAACGGGAAAAAGGCAAACGCCGAGCGACACAA
CACTCTCTGGCGATATCTGGACGGGGTCTTTCCAACGCCACCATTTTCAT
TGTATCTGCTCCCCTTGCCTTGGAGCAAACCGACTACCAGTACAAACTTC
ATCCCAGGGGGTGTGATATCTTACCACCCGTGTGGTAGTGTTGAACGGTA
ATTATCACCATAGACATCCCTCCCACCCTCCTGCCTCTCGCCTCCCGCCC
CTCGTTTCTCCTTTTTTTCGATTGGTTTTTATTTCAAGTGGCAATTTGGC
TGCCAGCTCGAACTTGTGGACTGACGTCTACAGCAGTCTATCGGAATAGG
TGGTGTAGGTCTACAGCTCTAGATATAACATAGGAGTATGTGTTTTCTGT
TTCACTACGTTTGTATTTCGTTCCATAGTTAGTTGAGCCTATCTTACGTC
CAATATCTATTGTAGATTATCTCGATCACGAGTTTAGGTGACAACAACAG
CAACAGCAACAACAGCAACAAGCACCACCACCACAACAACTTAACAACAG
AAATCATCATTTCACCACAACTACTCAACATCAACAGCACGGACGAAAAT
AGCAAACGAACTGAAAAAACGACATACAACAACAGCAGCAGCAACAGCAA
CAGCCGCAAACGACAGCTATAAAAACAACTGACGATCGTCACGTGCCGAC
TTCCATCAATACTACTGGTGTTTGTACGTACTTAAGATCAATATCGGAGC
TACTGGGCTGCGCTGTGTACTGGATGCGTCCTCGTGTCCGCAGCTGCACA
CGCTCATCCTCACCAAGGTCTCTCGCGTCAACGACCGTTGCCTGAAGGTA
AGCCATGCTCTAAGCTATCGCATGCTACTGTACGGTATATAGGGCTGCAA
CGAAGCATTATTATTAATAGCCTCCTCACTTGAAGACCTATGCCTCACAC
AAAAACTGCCTATTTCCACTACTTTCCCGCCTGCCAAGAATAGTGCTTTA
ATTCAGTGTTTTTTGTTTTTGGGGACGATATTGTACTTTTCACCTTTCCC
TACTGCAAAAAATATTCCATTCTATTTCCAAGTATAACGTCCCCAAAAAC
ATGGGCTGCACTTCGAATGGTTATACACCTTGGACAGATCATCTAACAGG
TCATCGACTCCAACTTGATCATCTAGATATATTATGCCTTTCACGGCAAA
TCTATTCCCGATCTTGTATGATCTGTATGATCTTGCTCATGTTGCCTGAT
GGGTGCCGTGCCAATCTGCTGCACGATCTAGCACGTGTTTCCTGTGTTGG
ATCTGCCCTATAATGCAGATAGATCATGCACAACCTCTCACAACGGCAGG
TGAGGAACTAGATCATATATATGTGGATAGATAGATAGATAGACCATGAT
CTGTCCGAGGTGGAAAAGGTTAACCCTTTTGGAACCCAGGCACAACCACC
AACTCCTTGAGTACACGGTCTCAAACAAAGTATTGAAACTATTCACACAT
AGGGCAAACGATCTGCAGTACTAGGCGTATCGTATCGTCCCCTAACCCAC
CAGCGCCGGGCTACTTATGATGGCCGACACGGTAATCTATTAGGACGGAC
CGGGTGATCACGCTCGATCCAGGGCCGGCATCGCTGAAGCACATGAGTGA
GATGATCACCCTCGTCAACATGAATGAAAGATAGACATGCTTTACTCTCC
AGCGTGGTAGGCAGTCTGCTGGAACTCAAACGAGGATAGAGTGATTGCTG
TGGGCGATGTTCTACAGCAGCAAGTAGCAACATTCGTCTTACCCCAATAT
CCATATCCACCCAGGAAACCAGGGGATGTACCCCGGATGTCCCCTGACGA
CCGGCCTCTGAAGCAGGATAGTCCCAAAACGGTCAAGGTTCACCCTTCTG
ACGAGACCGAAATAAACAGACATGCAGACATGTGCTCCCCCTCTAAGCCT
CTTCGCGCACTCCTCTGTCGCTACGTGATTCGCTGTGCAGGATATATCAC
CGAATATGGGGCGCGTGACATCGCTGACTGTGGACCAGTGCGAGGCCAAG
CCTACTACGGTGCAGTTTGTCGTCAGCAAATGTCCCCAACTCACCAGCTT
GGTGTTTTGCGCTCACAATGGCGCGCTGGAGCATCCGCAGGTATTGGATT
CCCCTGTGTGAATTGATCCGTTTTTTGTTACAGCGGTGAAGCAGTGCAGC
AGTGCAGCAGTACTTAGAGGCGCCTTGAGGTGGGGGTATGATGCATATAC
AGCGTCTAAAACTCATGGGGCTCCTCACCTAATTATAGTATAGTATAGGA
GCTCCACACCTGCAGTAGACCCAAAACGGACTTTGAAAGCCAAAGAAGAG
CTTCTTAACCCTGTTGGGACTTCAGACGGAAAAAATTGACCATAAAATAT
ACCAGGTACCAGGTAACGATTACCACGACGGCCACTGCGTGATTGGGGGA
TGGTACAGACTGGTTTCTTAGTTACAATGGTTGATGCGAGGAGTGGTACG
GTACGGGGCAAGATGGCCCGGCCTACCCGTATGATACTGCTGGACGCTGA
CGCTGCTCCTATCATAGGCGATTTAAAGTACACCAAACTTGTCGTTGTTT
TGGTTGTATCTCGGCGTCCCACACACAGGGGTAAACCCTATGATGAGAAA
TCACACGCCGTAGGTGTACAACGAGCAATACTAAAACACAACTAGTTTCC
AACGAACGATATTGCGGGGTTGTAAGCAACGATATCGCGAACCCCGTCAG
TCAGAAACACTCCGCCCAAAAAATACTACTATTAATAGAACTTATAGTTA
GCTTGTATTCCCCCTATCGTACCAATCGTACCACCCGTCGTACCATAATT
GTAACCGTTCGGATGTCTGCCTGGTCGGTGAAAACTCGATGTGCTCCGTC
CCGGCGTTGTAGGGATGCGAGGGTGTATGGTCATATATCAACGGCCATGC
ATGAGATCGAGTACACCCCCCACCCCCCCCCTGCTCCCGTCACCGCCCCC
CCCCCCCCCCCCCCCATACGCCGCTATGTTTTTGTGCAAACCTGCTTGGA
AGAACGGGCGGGCTCTGTTTAACTTCCTGCTTGCGCAAGGATCTGAAAAC
CTGGTCAAGGTTGACGTCCAGCAACCGAGGGTGGACCCGTCGAGAACAAG
CGACATCGATGCGCCTCAGTGGCTGTCGGAAGATAGGGCGTTCTACAACA
CCGTGCGAGACTGCGTCCGACCTCGAATTGTGATTGGCCAAGCAGAGACG
GCGGATGAGCGCATTGCGCCGTTCATGGCGGGGGGGGTAGACGTGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig11486:2195..9692-

>mRNA_M-pyrifera_M_contig11486.3090.1 ID=mRNA_M-pyrifera_M_contig11486.3090.1|Name=mRNA_M-pyrifera_M_contig11486.3090.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1842bp|location=Sequence derived from alignment at M-pyrifera_M_contig11486:2195..9692- (Macrocystis pyrifera P11B4 male)
CAGCCGAGATTCTCGCTGCTTAAGACCGCGGACCTGCGAGGACTCAACCT
GGGCGCAATGGGGTCCAGGCCCGACCTGCTGGTGACCCTCTTCGACCACT
GCAAGCACCTCACCACGCTTAACCTCTGGAACACTTACGTCCAACAGCCG
AGATTCTCGCTGCTTAAGACCGCGGACCTGCGAGGACTCAACCTGGGCGC
AATGGGGTCCAGGCCCGACCTGCTGGTGACCCTCTTCGACCACTGCAAGC
ACCTCACCACGCTTAACCTCTGGAACACTTACGTCCAAGATGAGAGGTTG
CCGCAGCCCGATTCTGCGGTGGAGGAGCTCATCGCAGAGAACCTTCCAGG
ATGAGAGGTTGCCGCAGCCCGATTCTGCGGTGGAGGAGCTCATCGCAGAG
AACCTTCCAGGAGTGCTCCACTTGGCTTTGGAAATCGACGCGTCTAACAA
GGGCTTGAAGCTGCTGCTGAAAGGCTGCCGACAGCTTCGCAGCCTCCACA
TCGGCACCAGGAGTGCTCCACTTGGCTTTGGAAATCGACGCGTCTAACAA
GGGCTTGAAGCTGCTGCTGAAAGGCTGCCGACAGCTTCGCAGCCTCCACA
TCGGCACCAGGTCCAACCGGAGGGGGGTTAGGATCGGCGAGTACCCGACC
GATTTCGGCATGAAAGCCTTCACTACATTGGGAGCACCCAACCTGAAAGT
ACTTTCTCTGGTTGACAAGGTCCAACCGGAGGGGGGTTAGGATCGGCGAG
TACCCGACCGATTTCGGCATGAAAGCCTTCACTACATTGGGAGCACCCAA
CCTGAAAGTACTTTCTCTGGTTGACAAGATCAATATCGGAGCTACTGGGC
TGCGCTGTGTACTGGATGCGTCCTCGTGTCCGCAGCTGCACACGCTCATC
CTCACCAAGGTCTCTCGCGTCAACGACCGTTGCCTGAAGATCAATATCGG
AGCTACTGGGCTGCGCTGTGTACTGGATGCGTCCTCGTGTCCGCAGCTGC
ACACGCTCATCCTCACCAAGGTCTCTCGCGTCAACGACCGTTGCCTGAAG
GATATATCACCGAATATGGGGCGCGTGACATCGCTGACTGTGGACCAGTG
CGAGGCCAAGCCTACTACGGTGCAGTTTGTCGTCAGCAAATGTCCCCAAC
TCACCAGCTTGGTGTTTTGCGCTCACAATGGCGCGCTGGAGCATCCGCAG
GATATATCACCGAATATGGGGCGCGTGACATCGCTGACTGTGGACCAGTG
CGAGGCCAAGCCTACTACGGTGCAGTTTGTCGTCAGCAAATGTCCCCAAC
TCACCAGCTTGGTGTTTTGCGCTCACAATGGCGCGCTGGAGCATCCGCAG
AACGGGCGGGCTCTGTTTAACTTCCTGCTTGCGCAAGGATCTGAAAACCT
GGTCAAGGTTGACGTCCAGCAACCGAGGGTGGACCCGTCGAGAACAAGCG
ACATCGATGCGCCTCAGTGGCTGTCGGAAGATAGGGCGTTCTACAACACC
GTGCGAGACTGCGTCCGACCTCGAATTGTGATTGGCCAAGCAGAGACGGC
GGATGAGCGCATTGCGCCGTTCATGGCGGGGGGGGTAGACGTGTAGAACG
GGCGGGCTCTGTTTAACTTCCTGCTTGCGCAAGGATCTGAAAACCTGGTC
AAGGTTGACGTCCAGCAACCGAGGGTGGACCCGTCGAGAACAAGCGACAT
CGATGCGCCTCAGTGGCTGTCGGAAGATAGGGCGTTCTACAACACCGTGC
GAGACTGCGTCCGACCTCGAATTGTGATTGGCCAAGCAGAGACGGCGGAT
GAGCGCATTGCGCCGTTCATGGCGGGGGGGGTAGACGTGTAG
back to top