mRNA_M-pyrifera_M_contig114854.3088.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A517PRM7_9PLAN (EcoKI restriction-modification system protein HsdS n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PRM7_9PLAN) HSP 1 Score: 280 bits (715), Expect = 6.050e-86 Identity = 136/187 (72.73%), Postives = 156/187 (83.42%), Query Frame = 1
Query: 1 VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVDLSNLDMDSLDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLEVSRRL 561
VRNGAVGG+AA+ FFVLRVDGD+LDPHF+MAYLNS EVRFWLEERARGSAA+HLS +FK++P+PLPPIQMQ RIG EYR+ G+DAIELLSRLLTGTE NAV+ WL+++W LSN D+DSL ISYW+ LS F +L E+ HST GPL W LAF+E LTP RGAE IPDGPALFSVL EV RRL
Sbjct: 120 VRNGAVGGVAANSFFVLRVDGDVLDPHFVMAYLNSSEVRFWLEERARGSAAKHLSSAVFKEIPIPLPPIQMQRRIGAEYRELGTDAIELLSRLLTGTETNAVSQWLNHYWATLSNQDVDSLRISYWQKLSGEFRKLRNEVAHSTSDAGPLTAWTLAFSEALTPFRGAEDIPDGPALFSVLNEVGRRL 306
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A497CWG2_9BACT (Site-specific DNA-methyltransferase (adenine-specific) (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A497CWG2_9BACT) HSP 1 Score: 172 bits (435), Expect = 2.370e-46 Identity = 87/190 (45.79%), Postives = 122/190 (64.21%), Query Frame = 1
Query: 4 RNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVDLSNLDMDS----LDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLEVSRRL 561
RNGAVG +AASG FVLR D D LDPHFL+AY +S E R WL+++ARG+ +HLS R+ ++PVPLPP+Q+Q R+ T++R+HG D + L++LLT E + + W+ + L LD+D+ LD+ + L+ + + H + GD L W LAFNE ++ LRG +IP GP L SVL E R L
Sbjct: 565 RNGAVGAIAASGLFVLRPDQDRLDPHFLLAYFDSSECRAWLDDKARGATIRHLSKRILNEMPVPLPPLQIQQRVATQHREHGVDMLAFLTQLLTQGEDDPIAQWIDKAAMGLP-LDVDAVDDPLDLDPLDRLASNVHEIRNLVAHDSRGDSALAAWILAFNEAVSGLRGVRAIPQGPGLLSVLQESIRAL 753
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A661RQ63_9DELT (Site-specific DNA-methyltransferase (adenine-specific) n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A661RQ63_9DELT) HSP 1 Score: 172 bits (435), Expect = 3.590e-46 Identity = 87/190 (45.79%), Postives = 122/190 (64.21%), Query Frame = 1
Query: 4 RNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVDLSNLDMDS----LDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLEVSRRL 561
RNGAVG +AASG FVLR D D LDPHFL+AY +S E R WL+++ARG+ +HLS R+ ++PVPLPP+Q+Q R+ T++R+HG D + L++LLT E + + W+ + L LD+D+ LD+ + L+ + + H + GD L W LAFNE ++ LRG +IP GP L SVL E R L
Sbjct: 565 RNGAVGAIAASGLFVLRPDQDRLDPHFLLAYFDSSECRAWLDDKARGATIRHLSKRILNEMPVPLPPLQIQQRVATQHREHGVDMLAFLTQLLTQGEDDPIAQWIDKAAMGLP-LDVDAVDDPLDLDPLDRLASNVHEIRNLVAHDSRGDSALAAWILAFNEAVSGLRGVRAIPQGPGLLSVLQESIRAL 753
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A0F2NC56_9DELT (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Desulfobulbaceae bacterium BRH_c16a TaxID=1629713 RepID=A0A0F2NC56_9DELT) HSP 1 Score: 164 bits (414), Expect = 2.390e-43 Identity = 83/185 (44.86%), Postives = 114/185 (61.62%), Query Frame = 1
Query: 1 VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVDLS---NLDMDSLDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLE 546
VRNGAVG +A SG +VLR D + LDPHFL AYL+S E R WL++RA G+ HL+ R+ +++PVPLPP+Q+Q R+ E+R+HG + + L+ LLT K+ + W+ DL D LD+S E L+ L E H G+ L W LAFNE ++ LRG ++P GP+L SVL E
Sbjct: 569 VRNGAVGAVAGSGMYVLRADNNRLDPHFLTAYLDSSECRSWLKDRASGAVISHLTKRIIEEIPVPLPPLQIQQRVAVEWREHGVEVLAYLAELLTDGGKDPIAVWVEKELKDLPAEVETISDPLDLSLLERLAAHARPLRNEAAHGRHGESALVPWLLAFNEAVSSLRGVSTMPHGPSLLSVLQE 753
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A2N2JZE0_9DELT (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-15 TaxID=2013742 RepID=A0A2N2JZE0_9DELT) HSP 1 Score: 157 bits (397), Expect = 4.590e-41 Identity = 81/191 (42.41%), Postives = 119/191 (62.30%), Query Frame = 1
Query: 1 VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVDLSNLDMDS----LDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLEVSRRL 561
VRNG +G +AASGFFVL+ + LDPH+L+AYLNS E + WL+++ARG++ +HLS R +DLPVP PP+Q+QHR+ + R+HG D + LS+LLT E++ + W+ V + + +DS LD S + L+ + E H + PL W + F++ +T L G +P GP L SVL E +R L
Sbjct: 549 VRNGGIGAIAASGFFVLQANQWSLDPHYLLAYLNSAECQAWLDDKARGTSVRHLSRRDIEDLPVPCPPMQIQHRVANQCREHGIDMLGFLSQLLTEGERDPIAEWVEKA-VQVLPVAVDSMNDPLDFSILDHLTREVLPIRNETVHGRQPESPLVAWVVQFSDAMTVLHGVRDLPLGPGLLSVLQESARSL 738
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A8J6P1K3_9DELT (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Candidatus Desulfatibia vada TaxID=2841696 RepID=A0A8J6P1K3_9DELT) HSP 1 Score: 150 bits (379), Expect = 1.200e-38 Identity = 81/188 (43.09%), Postives = 116/188 (61.70%), Query Frame = 1
Query: 1 VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNH---WVDLSNLDMDSLDISYWEDLSYIFGRLSTEITHSTPGDGP---LKEWALAFNEVLTPLRGAESIPDGPALFSVLLE 546
VRNGAVG +AASGFF+LR + LDPHFLMAYLNS E R WL ERARG++ Q LS + +LPVPLPP+Q+QHR+ E+R+ G D + L++LLT E++ ++ W+ + D + D +D++ + L+ L E + G P L+ W + F + ++PL+G +P G L SVL E
Sbjct: 584 VRNGAVGAIAASGFFILRPIQESLDPHFLMAYLNSNECRTWLGERARGTSIQRLSKSVLYELPVPLPPLQIQHRVANEHRERGVDMLSFLAQLLTQGERDPISEWVEKKLKSFPDSAEKLADIMDLTPLDHLAIEGKSLFQEAYNRIDGGFPETTLESWIMIFYKAISPLQGVHDMPLGAGLLSVLQE 771
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A8ZY60_DESOH (Site-specific DNA-methyltransferase (adenine-specific) n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) TaxID=96561 RepID=A8ZY60_DESOH) HSP 1 Score: 142 bits (357), Expect = 1.090e-35 Identity = 76/191 (39.79%), Postives = 114/191 (59.69%), Query Frame = 1
Query: 1 VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVDLSNLDMDS----LDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLEVSRRL 561
V NGAVG +AASG +VLR +DPHFL+AYL+S E R WL++RA G HL+ R ++LPVP+PP+Q+QHR+ E+R+H DA+ L +L+G +++ W+ L + DM++ LD+S + L+ + E +S + L W LAF+ L PL+G S+P GP + L E +R+
Sbjct: 561 VCNGAVGAVAASGLYVLRPKDGRIDPHFLVAYLDSNECRAWLKDRASGGVINHLNKRAIENLPVPIPPLQIQHRVADEFREHKVDALNYLMVILSGKGHDSIAEWIEKTIKKLPS-DMENKRFPLDLSLLDQLAKEAQAFADE-RNSDDNNNDLLPWLLAFSHSLRPLQGINSLPQGPGMLIALKESKQRI 749
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A1H3QXD8_9GAMM (Site-specific DNA-methyltransferase (adenine-specific) n=2 Tax=Lysobacter sp. yr284 TaxID=1761791 RepID=A0A1H3QXD8_9GAMM) HSP 1 Score: 131 bits (329), Expect = 6.230e-32 Identity = 75/191 (39.27%), Postives = 110/191 (57.59%), Query Frame = 1
Query: 1 VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVD------LSNLDMDSLDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLEVSR 555
VRNGAVG +AASG +VLRVD + LD FL+AYL S + WL ++RG+ QHL+ + +LPVPLPP+Q+Q R ++R+ G+DA+ LS+ E + +T WL++ +D + LD D+ +S++E + + GR + G ++ W E L PL G IP GP L +VL E R
Sbjct: 573 VRNGAVGSIAASGLYVLRVDQERLDAGFLLAYLASPACQNWLAAQSRGAVIQHLNRAVLNNLPVPLPPLQLQARAAAQFREFGTDALTFLSQATESNESDRLTRWLAD--LDGKVPKFVGGLD-DTPALSHFESIVVLAGRARRWLDQEQVGSQAVR-WLKPLTETLLPLVGVAQIPPGPGLLNVLQEAER 759
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A3M0XW59_9PROT (Site-specific DNA-methyltransferase (adenine-specific) (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XW59_9PROT) HSP 1 Score: 130 bits (326), Expect = 1.500e-31 Identity = 75/191 (39.27%), Postives = 103/191 (53.93%), Query Frame = 1
Query: 1 VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVDLSNL----DMDSLDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLEVSRRL 561
VRNGAVGG+AA+G FVL D LDPHFL AY+NS E R WLE +A G+ + L + + LP PLPP+ +QHR+ + R+HG DA+ L LLT E + + W+ + L D+D+ + F + ++ D PL WA V RG+E +P GPAL S+L + R L
Sbjct: 472 VRNGAVGGVAANGLFVLEPDVSRLDPHFLAAYINSRECRAWLEAKAGGAVIKSLKKQFVEALPAPLPPLLVQHRVAADVREHGVDALTQLLLLLTRDEDDPLAQWMDRGQLLLEEAGGGKDVDASQVVRLRVFGAAFDPVRAWVSPENE-DRPLLPWARRLIGVADLFRGSEEVPRGPALLSLLQQGLREL 661
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Match: A0A3G7JW76_9PSED (Site-specific DNA-methyltransferase (adenine-specific) n=2 Tax=Pseudomonas chlororaphis TaxID=587753 RepID=A0A3G7JW76_9PSED) HSP 1 Score: 126 bits (317), Expect = 2.530e-30 Identity = 70/189 (37.04%), Postives = 109/189 (57.67%), Query Frame = 1
Query: 1 VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAAQHLSVRLFKDLPVPLPPIQMQHRIGTEYRKHGSDAIELLSRLLTGTEKNAVTHWLSNHWVDL----SNLDMDSLDISYWEDLSYIFGRLSTEITHSTPGDGPLKEWALAFNEVLTPLRGAESIPDGPALFSVLLEVSR 555
VRN AVG +AA+G +VLRV+ +D +FL+AYL+S + WL ++RGS QHL+ + DLPVPLPP QMQ R ++R+ G+D + LS+ +E + +T WL+ + S+LD ++ +S++E + + G + I H + W + N+ + PL G IP GP L +VL + R
Sbjct: 550 VRNIAVGSIAANGLYVLRVNQKRIDANFLLAYLSSSACQNWLAAQSRGSVIQHLNRAVLNDLPVPLPPPQMQARAAAQFREFGTDTLTFLSQATGSSESDRLTAWLAELDSKVPRFTSSLD-ETPTLSHFEPVVALVGSIRNWIAHGQVSSH-VTRWLMPLNQAVLPLAGVSQIPQGPGLLNVLQDAER 736 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114854.3088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114854.3088.1 >prot_M-pyrifera_M_contig114854.3088.1 ID=prot_M-pyrifera_M_contig114854.3088.1|Name=mRNA_M-pyrifera_M_contig114854.3088.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp VRNGAVGGLAASGFFVLRVDGDLLDPHFLMAYLNSGEVRFWLEERARGSAback to top mRNA from alignment at M-pyrifera_M_contig114854:8..568- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114854.3088.1 ID=mRNA_M-pyrifera_M_contig114854.3088.1|Name=mRNA_M-pyrifera_M_contig114854.3088.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig114854:8..568- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114854:8..568- >mRNA_M-pyrifera_M_contig114854.3088.1 ID=mRNA_M-pyrifera_M_contig114854.3088.1|Name=mRNA_M-pyrifera_M_contig114854.3088.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig114854:8..568- (Macrocystis pyrifera P11B4 male)back to top |