prot_M-pyrifera_M_contig114821.3081.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114821.3081.1
Unique Nameprot_M-pyrifera_M_contig114821.3081.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: L8HJR5_ACACA (Ribosome biogenesis protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJR5_ACACA)

HSP 1 Score: 167 bits (423), Expect = 9.050e-46
Identity = 81/115 (70.43%), Postives = 94/115 (81.74%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            S VI+SLV HYT Q L  + GP+TV+SGKKRRLT  ECP D+ AM D+AKVADLVLLV+DAH+GFEMETFEFLN+LQ+HGFP++MGVLTH+DEFKS K     KKQ K RFW EI
Sbjct:   98 STVIRSLVHHYTGQNLTKINGPITVVSGKKRRLTFFECPNDMNAMLDIAKVADLVLLVVDAHFGFEMETFEFLNVLQVHGFPRIMGVLTHMDEFKSAKTLKNTKKQMKHRFWTEI 212          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: A0A7S3C8Q3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C8Q3_9CHLO)

HSP 1 Score: 155 bits (393), Expect = 9.320e-45
Identity = 79/115 (68.70%), Postives = 90/115 (78.26%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            S VIKSLVKHY RQ +   KGP++VISGK RR+TL+ECP  L  M D +KVADLVLLVID ++GFEMETFEFLNLLQ+HGFPKVMGVLTHLD +KS+      KK  K RFW EI
Sbjct:  159 STVIKSLVKHYARQNISDTKGPISVISGKSRRITLIECPKTLTGMIDASKVADLVLLVIDGNFGFEMETFEFLNLLQVHGFPKVMGVLTHLDMYKSKDRLKKVKKGLKARFWNEI 273          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: A0A7S3YEJ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEJ2_HETAK)

HSP 1 Score: 157 bits (396), Expect = 1.170e-44
Identity = 78/115 (67.83%), Postives = 94/115 (81.74%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            S++I+SLVK YTRQ L  + GP+T++  KKRRLTL EC  DL+AM D+AK+ADLVLL++DA YGFEMETFEFLN+LQ+HGFPKVMGVLTHLD+ K+ KA S  KK  K RFW EI
Sbjct:   54 SSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKVMGVLTHLDKMKNNKALSKTKKALKHRFWTEI 168          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: A0A6A7GA06_9CRUS (Ribosome biogenesis protein BMS1 homolog (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GA06_9CRUS)

HSP 1 Score: 164 bits (414), Expect = 1.480e-44
Identity = 79/115 (68.70%), Postives = 95/115 (82.61%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            + +IKSLV+HYT  +L  VKGP+TV+SGK +RLT  ECP DL AM D+AKVADLVLL++D HYGFEMETFEFLN+ Q+HGFPK+MGVLTHLD+FKS+KA    KK+ K RFW EI
Sbjct:  115 TTLIKSLVRHYTNHSLTEVKGPITVVSGKSQRLTFFECPNDLNAMIDIAKVADLVLLLVDGHYGFEMETFEFLNIAQVHGFPKIMGVLTHLDQFKSQKALRMTKKKLKHRFWTEI 229          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: A0A4P9Y0H9_9FUNG (NUC121 domain-containing protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y0H9_9FUNG)

HSP 1 Score: 156 bits (395), Expect = 4.540e-44
Identity = 75/115 (65.22%), Postives = 94/115 (81.74%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            S +IKSLVK YT+  L  ++GP+TV+SGKKRRLT +ECP D+ +M DV KVADL+LL++DA YGFEMETFEFLN+LQ HGFPK++GVLTHLD FK+  A +  KK+ K+RFW EI
Sbjct:   85 STLIKSLVKRYTKHNLSEIRGPITVVSGKKRRLTFIECPNDINSMMDVGKVADLILLLVDASYGFEMETFEFLNILQTHGFPKIIGVLTHLDRFKNGAALTATKKRLKQRFWTEI 199          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: A0A7S1G9T8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9T8_9STRA)

HSP 1 Score: 158 bits (400), Expect = 4.760e-44
Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            S +I+ LVKHYTR TL  ++GP+TV++GKKRR++  ECP DLAAM D+AKVADLVLL+IDA +GFEMETFEFLN+LQ+HGFPKVMGVLTHLD F+  K     KK  K RFW EI
Sbjct:   98 STLIRDLVKHYTRHTLTHIRGPVTVVTGKKRRVSFFECPNDLAAMIDLAKVADLVLLLIDASFGFEMETFEFLNILQVHGFPKVMGVLTHLDGFQQNKRLKKTKKTLKNRFWTEI 212          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: I1CTC2_RHIO9 (Bms1-type G domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CTC2_RHIO9)

HSP 1 Score: 155 bits (392), Expect = 9.230e-44
Identity = 77/115 (66.96%), Postives = 94/115 (81.74%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            S +I+SLVK YT+  L  +KGP+TV+SGKKRRLT +EC  DL +M DVAK+ADLVLL+IDA +GFEMETFEFLN+LQ HGFPKVMGVLTHLD+F++ K+    KK+ K RFW EI
Sbjct:   89 STLIRSLVKRYTKHNLNEIKGPITVVSGKKRRLTFMECNNDLNSMIDVAKIADLVLLMIDASFGFEMETFEFLNILQSHGFPKVMGVLTHLDKFRNNKSLRATKKRLKDRFWTEI 203          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: A0A2P5YM98_GOSBA (Bms1-type G domain-containing protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5YM98_GOSBA)

HSP 1 Score: 149 bits (376), Expect = 2.070e-43
Identity = 73/115 (63.48%), Postives = 89/115 (77.39%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            S +IK+LVKHYT+  L  V+GP+T++SGK+RRL  +ECP D+  M D AK ADL LL+ID  YGFEMETFEFLN+LQ+HGFPKVMGVLTHLD+FK  K     K++ K RFW EI
Sbjct:   64 SLLIKTLVKHYTKHNLPDVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLKKTKQRLKHRFWTEI 178          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: A0A5J4XK00_9CHLO (Ribosome biogenesis BMS1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XK00_9CHLO)

HSP 1 Score: 154 bits (390), Expect = 2.500e-43
Identity = 77/115 (66.96%), Postives = 89/115 (77.39%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            + +IK+L+KHY  Q L  VKGP+TV+SGK RRLT +ECP DL  M D AK ADLVLL++D  +GFEMETFEFLNLLQ+HGFPKVMGVLTHLD FK +K     KK  K RFWAEI
Sbjct:  101 TTLIKNLIKHYVNQNLSEVKGPITVVSGKTRRLTFVECPQDLHGMIDAAKYADLVLLMVDGGFGFEMETFEFLNLLQVHGFPKVMGVLTHLDGFKDQKKLKKTKKALKHRFWAEI 215          
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Match: A0A7S0WVV3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WVV3_9CHLO)

HSP 1 Score: 150 bits (380), Expect = 3.200e-43
Identity = 75/115 (65.22%), Postives = 88/115 (76.52%), Query Frame = 0
Query:    1 SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAKVADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQSTAKKQRKKRFWAEI 115
            + +IKSLVKHYT+  L  +KGP+T+ISGKKRRLT +EC  DL  M D AK ADLVLLV+D  +GFEMETFEFLN+LQ+HGFPKVMGVLTHLD+F         KK+ K RFW EI
Sbjct:   87 TTIIKSLVKHYTKHNLSDIKGPITLISGKKRRLTFVECSSDLNVMMDGAKYADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMGVLTHLDDFDKPSILKKTKKKLKHRFWTEI 201          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114821.3081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8HJR5_ACACA9.050e-4670.43Ribosome biogenesis protein n=1 Tax=Acanthamoeba c... [more]
A0A7S3C8Q3_9CHLO9.320e-4568.70Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A7S3YEJ2_HETAK1.170e-4467.83Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6A7GA06_9CRUS1.480e-4468.70Ribosome biogenesis protein BMS1 homolog (Fragment... [more]
A0A4P9Y0H9_9FUNG4.540e-4465.22NUC121 domain-containing protein n=1 Tax=Piptoceph... [more]
A0A7S1G9T8_9STRA4.760e-4467.83Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
I1CTC2_RHIO99.230e-4466.96Bms1-type G domain-containing protein n=1 Tax=Rhiz... [more]
A0A2P5YM98_GOSBA2.070e-4363.48Bms1-type G domain-containing protein n=1 Tax=Goss... [more]
A0A5J4XK00_9CHLO2.500e-4366.96Ribosome biogenesis BMS1 n=1 Tax=Trebouxia sp. A1-... [more]
A0A7S0WVV3_9CHLO3.200e-4365.22Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..115
e-value: 1.6E-13
score: 52.5
NoneNo IPR availablePANTHERPTHR12858:SF2RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOGcoord: 1..115
IPR039761Ribosome biogenesis protein Bms1/Tsr1PANTHERPTHR12858RIBOSOME BIOGENESIS PROTEINcoord: 1..115
IPR030387Bms1/Tsr1-type G domainPROSITEPS51714G_BMS1coord: 1..115
score: 8.865
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114821contigM-pyrifera_M_contig114821:226..570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114821.3081.1mRNA_M-pyrifera_M_contig114821.3081.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114821 226..570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114821.3081.1 ID=prot_M-pyrifera_M_contig114821.3081.1|Name=mRNA_M-pyrifera_M_contig114821.3081.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
SAVIKSLVKHYTRQTLKSVKGPMTVISGKKRRLTLLECPVDLAAMADVAK
VADLVLLVIDAHYGFEMETFEFLNLLQIHGFPKVMGVLTHLDEFKSRKAQ
STAKKQRKKRFWAEI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039761Bms1/Tsr1
IPR030387G_Bms1/Tsr1_dom
IPR027417P-loop_NTPase