prot_M-pyrifera_M_contig114792.3073.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig114792.3073.1
Unique Nameprot_M-pyrifera_M_contig114792.3073.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length151
Homology
BLAST of mRNA_M-pyrifera_M_contig114792.3073.1 vs. uniprot
Match: L8HDT2_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDT2_ACACA)

HSP 1 Score: 61.6 bits (148), Expect = 3.210e-8
Identity = 52/167 (31.14%), Postives = 69/167 (41.32%), Query Frame = 0
Query:    4 AQLDEEAYQNTFGVSYPLTPDECTTDTFRFACLGVFLGCE---EVPLAALPGAKVVLPVPPCKSVCEAVAVGCESFLAAAGRDP--PDCE---EKTSTGLPLFPEENFSLAIGDQVVSFP-----------CNVPPDQDVDVHKTCPASFSDEDDDCGTPCPIPLYS 151
            A +D+ A   T  V     P EC +      C+G FL C+     PL  +         PPC+SVCEAV +GC +F  + G     PDC+     T T  P FP +      G Q V+ P           C  P   + D   +  AS  D    C  PCP P++S
Sbjct:   54 ASVDKRAANQT-AVMGAFFPPECRSPLVALTCMGSFLRCQFNSNFPLFDV--------YPPCRSVCEAVVLGCTAFFESQGMKKMLPDCDMIDNSTGTPFPAFPPD------GTQCVAMPPDMFVPYGEADCPYPLKFNYDDQDSFTASSYDPTQMCVMPCPNPMWS 205          
BLAST of mRNA_M-pyrifera_M_contig114792.3073.1 vs. uniprot
Match: L8H7W4_ACACA (Frizzled/Smoothened family membrane region protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H7W4_ACACA)

HSP 1 Score: 55.8 bits (133), Expect = 3.270e-6
Identity = 45/157 (28.66%), Postives = 64/157 (40.76%), Query Frame = 0
Query:    4 AQLDEEAYQNTFGVSYPLTPDECTTDTFRFACLGVFLGCEEVPLAALPGAKVVLPVPPCKSVCEAVAVGCESFLAAAGRDP--PDCE---EKTSTGLPLFPEENFSLAIGDQVVSFPCNVPPDQDVDVHKTCPASFSDEDDD----CGTPCPIPLYS 151
            A+LDEE    T  +     P EC        C+G F  C     + +P   V    PPC+SVCEAV +GC +F  + G     PDC+     T T +P FP +       ++                      SF++ D D    C  PCP P+++
Sbjct:   65 AELDEEVGAKTVLMG-AFFPPECRNPLLALTCMGSFTHCR---FSTVPSFDVY---PPCRSVCEAVLLGCTAFFESQGMTSQLPDCDMTDNSTGTVVPAFPPDGTQYNRDEE---------------------DSFAESDYDGQVMCVMPCPNPMWT 193          
BLAST of mRNA_M-pyrifera_M_contig114792.3073.1 vs. uniprot
Match: L8GEN4_ACACA (Frizzled/Smoothened family membrane region protein n=2 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEN4_ACACA)

HSP 1 Score: 54.7 bits (130), Expect = 8.310e-6
Identity = 50/161 (31.06%), Postives = 67/161 (41.61%), Query Frame = 0
Query:   23 PDECTTDTFRFACLGVFLGCEEVPLAALPGAKVVLPVPPCKSVCEAVAVGCESFLAAAGR--DPPDCEE---KTSTGLPLFPEENFSLAIGDQVVSFP---CNVPPDQ----DVDVHKT------CP----------ASFSDE----DDDCGTPCPIPLYS 151
            P  C        C+G FL C     + +P   V    PPC+SVCEAV +GC +F  + G     PDC++    T T LP FP +      G Q +S P   C   P      D+  H        CP          +SF++      D C  PCP P++S
Sbjct:   86 PPVCRNPLLALTCMGNFLHCR---FSTVPQFDVY---PPCRSVCEAVVLGCTAFFESQGTLGQLPDCDQIDNSTGTPLPAFPPD------GTQCLSVPPDLCTTSPKPFIHGDLTDHLVPYTQADCPYPLKYNYDGESSFAENGYNGQDMCVMPCPNPMWS 234          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114792.3073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
L8HDT2_ACACA3.210e-831.14Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
L8H7W4_ACACA3.270e-628.66Frizzled/Smoothened family membrane region protein... [more]
L8GEN4_ACACA8.310e-631.06Frizzled/Smoothened family membrane region protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036790Frizzled cysteine-rich domain superfamilyGENE3D1.10.2000.10coord: 2..98
e-value: 2.8E-7
score: 32.7
IPR036790Frizzled cysteine-rich domain superfamilySUPERFAMILY63501Frizzled cysteine-rich domaincoord: 13..86
IPR020067Frizzled domainPROSITEPS50038FZcoord: 1..89
score: 10.254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114792contigM-pyrifera_M_contig114792:117..569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114792.3073.1mRNA_M-pyrifera_M_contig114792.3073.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig114792 117..569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig114792.3073.1 ID=prot_M-pyrifera_M_contig114792.3073.1|Name=mRNA_M-pyrifera_M_contig114792.3073.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
SSQAQLDEEAYQNTFGVSYPLTPDECTTDTFRFACLGVFLGCEEVPLAAL
PGAKVVLPVPPCKSVCEAVAVGCESFLAAAGRDPPDCEEKTSTGLPLFPE
ENFSLAIGDQVVSFPCNVPPDQDVDVHKTCPASFSDEDDDCGTPCPIPLY
S
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036790Frizzled_dom_sf
IPR020067Frizzled_dom