mRNA_M-pyrifera_M_contig101460.306.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101460.306.1
Unique NamemRNA_M-pyrifera_M_contig101460.306.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: A0A517WFU9_9PLAN (Uncharacterized protein n=4 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WFU9_9PLAN)

HSP 1 Score: 280 bits (715), Expect = 8.300e-94
Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 1 
Query:    1 KRDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            KR TTFVLVSRAPLEKLQKY+AEQGW RTWVSSFESDFNYDFHVTLD TVAPPEYNYRSQKELQQRK+AEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG
Sbjct:  110 KRGTTFVLVSRAPLEKLQKYKAEQGWGRTWVSSFESDFNYDFHVTLDGTVAPPEYNYRSQKELQQRKDAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 246
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BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: A6C6T4_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A6C6T4_9PLAN)

HSP 1 Score: 239 bits (610), Expect = 7.520e-78
Identity = 103/136 (75.74%), Postives = 124/136 (91.18%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            RDTTF L+SRAPLEKL K +A+QGW+RTWVSSFESDFNYDFHVTLD+ + PP+YNYR+Q ELQQR+  EP+FLSGE+HG+SVFFR+GD++YHTYST+ARGCE LT+++ LLD+TPYGRQE+FEDSP  WPQKPTYG
Sbjct:  110 RDTTFALISRAPLEKLLKMKADQGWNRTWVSSFESDFNYDFHVTLDDKITPPQYNYRTQAELQQRQNDEPYFLSGEMHGMSVFFRLGDEIYHTYSTFARGCEGLTNAYSLLDITPYGRQEDFEDSPVAWPQKPTYG 245
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BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: A0A2E2C865_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C865_9PLAN)

HSP 1 Score: 235 bits (599), Expect = 3.530e-76
Identity = 101/136 (74.26%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            RDT F ++SRAPL KL K +A+QGW+RTWVSSF+SDFNYDFHVTLDE V PP+YN+RS+ ELQQRK  EP+FLSGE+HG+SVFFR+GD++YHTYSTYARGCE LT+++ LLD+TP+GRQE+FE+SP GWPQKPTYG
Sbjct:  110 RDTIFAMISRAPLAKLLKMKADQGWERTWVSSFDSDFNYDFHVTLDEKVTPPQYNFRSKAELQQRKNDEPYFLSGEMHGMSVFFRLGDEIYHTYSTYARGCEGLTNAYSLLDITPFGRQEDFEESPVGWPQKPTYG 245
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BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: A0A350K5Y6_9PLAN (DUF899 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K5Y6_9PLAN)

HSP 1 Score: 232 bits (592), Expect = 4.090e-75
Identity = 102/136 (75.00%), Postives = 120/136 (88.24%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            RDTTF L+SRAPLEKL K +A+QGWDRTWVSS  SDFNYDFHVTLD+ + PP+YNYRSQ ELQQR+  EP+FL+GE+HG+SVFFR+  D+YHTYST+ARGCE LT+++ LLD+TPYGRQE FEDSP GWPQKPTYG
Sbjct:  110 RDTTFTLISRAPLEKLLKMKADQGWDRTWVSSNGSDFNYDFHVTLDDEIMPPQYNYRSQAELQQRQTDEPYFLAGEMHGMSVFFRISADIYHTYSTFARGCEGLTNAYSLLDITPYGRQEAFEDSPVGWPQKPTYG 245
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BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: A0A1I3T690_9PLAN (Predicted dithiol-disulfide oxidoreductase, DUF899 family n=1 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3T690_9PLAN)

HSP 1 Score: 227 bits (578), Expect = 5.660e-73
Identity = 101/136 (74.26%), Postives = 118/136 (86.76%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            R TT  L+SRAPLEKL KY+ +QGW+RTWVSSF + FNYDFHVTLD++V P EYN+R  +EL+ R+ AEP+FL GE HG SVFFR+ D+VYHTYSTYARGCESLTDS+ LLD+TPYGRQE+FEDSPAGWPQKPTYG
Sbjct:  110 RQTTLALISRAPLEKLLKYKQQQGWNRTWVSSFNNRFNYDFHVTLDKSVVPLEYNFRKAEELESRQAAEPWFLQGESHGTSVFFRIDDNVYHTYSTYARGCESLTDSYSLLDITPYGRQEDFEDSPAGWPQKPTYG 245
[Close]
BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: S2L5S5_HALAF (Uncharacterized protein n=2 Tax=Halomonas TaxID=2745 RepID=S2L5S5_HALAF)

HSP 1 Score: 221 bits (564), Expect = 6.880e-71
Identity = 101/136 (74.26%), Postives = 118/136 (86.76%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            RDT+F LVSRAPL KL+ Y+A+QGW   WVSS  SDFNYDFHVTLDETVA PEYNYR++ EL+QR   EP F+SGE HG+SVFFR+GD+++H+YSTYARGCESLTD++ LLD TPYGRQE+FEDSP GWPQKPTYG
Sbjct:  109 RDTSFALVSRAPLAKLETYKAQQGWRWPWVSSHGSDFNYDFHVTLDETVASPEYNYRNKAELEQRM-GEPHFMSGECHGLSVFFRLGDEIFHSYSTYARGCESLTDAYALLDRTPYGRQEDFEDSPPGWPQKPTYG 243
[Close]
BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: A0A318L7L4_9GAMM (Uncharacterized protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A318L7L4_9GAMM)

HSP 1 Score: 220 bits (560), Expect = 2.790e-70
Identity = 99/136 (72.79%), Postives = 118/136 (86.76%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            RDT+F LVSRAPL KL+ YQAEQ W   WVSS +SDFNYDFHVTLD +VAPPEYNYRS++EL+ R   EP F+SGE HG+SVFFR+G++++H+YSTYARGCESLTD++ LLD TPYGRQE+FEDSP GWPQ+PTYG
Sbjct:  109 RDTSFALVSRAPLAKLEAYQAEQSWHWPWVSSLDSDFNYDFHVTLDASVAPPEYNYRSREELEART-GEPHFMSGECHGLSVFFRLGEELFHSYSTYARGCESLTDAYALLDTTPYGRQEDFEDSPPGWPQRPTYG 243
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BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: A0A518DGX3_9BACT (Uncharacterized protein n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DGX3_9BACT)

HSP 1 Score: 216 bits (549), Expect = 1.260e-68
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            R+TT+VL+SRAPL KL+KY+AE+GW+  W SSF  DFNYDFHVTLD  V P  +NYR   E++ RK+AEP+F  GE HG+SVFFR+ D+VYHTYS YARG ESLTD++RLLD+TPYGRQE+FEDSP+GWPQ+PTYG
Sbjct:  107 RNTTYVLISRAPLAKLEKYKAERGWNLPWYSSFGGDFNYDFHVTLDPAVVPLRHNYREPDEMESRKDAEPYFQKGETHGISVFFRLDDNVYHTYSAYARGVESLTDAYRLLDITPYGRQEDFEDSPSGWPQRPTYG 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: UPI001EE7D5D4 (DUF899 domain-containing protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE7D5D4)

HSP 1 Score: 216 bits (549), Expect = 1.260e-68
Identity = 96/136 (70.59%), Postives = 113/136 (83.09%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            RDT FVL+SRAP EKL+ Y+ E+ W+R WVSSF SDFNYDFHVT D TV P EYN+R++ EL+ R +AEP+FL GE HG+SVFF++   VYHTYSTY RGCESLTDS+RLLD TP+GRQE+FEDSP GWPQ PTYG
Sbjct:  107 RDTAFVLISRAPFEKLEAYRKERDWNRRWVSSFGSDFNYDFHVTQDRTVVPLEYNFRTEAELETRADAEPWFLEGETHGLSVFFQLDRQVYHTYSTYGRGCESLTDSYRLLDTTPFGRQEDFEDSPTGWPQHPTYG 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Match: A0A8J7ARE1_9CYAN (DUF899 domain-containing protein n=1 Tax=Romeria aff. gracilis LEGE 07310 TaxID=915328 RepID=A0A8J7ARE1_9CYAN)

HSP 1 Score: 215 bits (548), Expect = 1.790e-68
Identity = 96/136 (70.59%), Postives = 117/136 (86.03%), Query Frame = 1 
Query:    4 RDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETVAPPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYARGCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG 411
            RDTTFVL+SRAPLEKL++Y+A+QGW   W SSF SDFNYDFHV+LDE+VAP +YNYRS+ EL+ + E    F+ GE HG+SVFFR+ DDV+HTYSTYARGCE LT+++ LLD+TPYGRQE+FEDSP GWPQ+PTYG
Sbjct:  109 RDTTFVLISRAPLEKLERYKAKQGWSLPWASSFSSDFNYDFHVSLDESVAPVQYNYRSKAELESKGEGH--FMKGESHGLSVFFRLDDDVFHTYSTYARGCEGLTNAYSLLDVTPYGRQEDFEDSPPGWPQQPTYG 242
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101460.306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WFU9_9PLAN8.300e-9496.35Uncharacterized protein n=4 Tax=Gimesia chilikensi... [more]
A6C6T4_9PLAN7.520e-7875.74Uncharacterized protein n=6 Tax=Gimesia TaxID=1649... [more]
A0A2E2C865_9PLAN3.530e-7674.26Uncharacterized protein n=4 Tax=Planctomycetaceae ... [more]
A0A350K5Y6_9PLAN4.090e-7575.00DUF899 domain-containing protein n=1 Tax=Planctomy... [more]
A0A1I3T690_9PLAN5.660e-7374.26Predicted dithiol-disulfide oxidoreductase, DUF899... [more]
S2L5S5_HALAF6.880e-7174.26Uncharacterized protein n=2 Tax=Halomonas TaxID=27... [more]
A0A318L7L4_9GAMM2.790e-7072.79Uncharacterized protein n=3 Tax=Halomonas TaxID=27... [more]
A0A518DGX3_9BACT1.260e-6869.12Uncharacterized protein n=1 Tax=Pirellulimonas nud... [more]
UPI001EE7D5D41.260e-6870.59DUF899 domain-containing protein n=1 Tax=Rubinisph... [more]
A0A8J7ARE1_9CYAN1.790e-6870.59DUF899 domain-containing protein n=1 Tax=Romeria a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101460contigM-pyrifera_M_contig101460:255..668 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score240.0
Seed ortholog evalue6.7e-61
Seed eggNOG ortholog344747.PM8797T_24836
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Bacterial protein of unknown function (DUF899)
EggNOG OGs2IZN0@203682,COG4312@1,COG4312@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size414
Cds size414
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815512.592181-CDS-M-pyrifera_M_contig101460:254..6681622815512.592181-CDS-M-pyrifera_M_contig101460:254..668Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101460 255..668 -
1692277445.0178094-CDS-M-pyrifera_M_contig101460:254..6681692277445.0178094-CDS-M-pyrifera_M_contig101460:254..668Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101460 255..668 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101460.306.1prot_M-pyrifera_M_contig101460.306.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101460 255..668 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101460.306.1

>prot_M-pyrifera_M_contig101460.306.1 ID=prot_M-pyrifera_M_contig101460.306.1|Name=mRNA_M-pyrifera_M_contig101460.306.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
KRDTTFVLVSRAPLEKLQKYQAEQGWDRTWVSSFESDFNYDFHVTLDETV
APPEYNYRSQKELQQRKEAEPFFLSGELHGVSVFFRVGDDVYHTYSTYAR
GCESLTDSFRLLDLTPYGRQEEFEDSPAGWPQKPTYG*
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mRNA from alignment at M-pyrifera_M_contig101460:255..668-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101460.306.1 ID=mRNA_M-pyrifera_M_contig101460.306.1|Name=mRNA_M-pyrifera_M_contig101460.306.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig101460:255..668- (Macrocystis pyrifera P11B4 male)
AAACGGGATACGACATTCGTTCTGGTTTCCCGAGCACCATTGGAAAAACT
TCAGAAATATCAGGCCGAACAGGGATGGGACCGCACCTGGGTCTCTTCAT
TCGAAAGTGACTTCAACTACGATTTCCATGTCACACTCGACGAAACCGTT
GCTCCGCCTGAATATAACTATCGCAGCCAGAAAGAACTGCAGCAGCGAAA
GGAGGCGGAACCATTTTTCCTCTCAGGCGAACTGCACGGGGTTAGTGTCT
TTTTCCGTGTGGGCGACGATGTTTATCACACCTATTCGACCTACGCCCGG
GGATGTGAAAGCCTGACCGATTCCTTTCGTCTGCTGGACCTGACCCCCTA
TGGTCGCCAGGAAGAATTCGAAGATTCCCCAGCTGGCTGGCCCCAGAAGC
CCACTTACGGTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101460:255..668-

>mRNA_M-pyrifera_M_contig101460.306.1 ID=mRNA_M-pyrifera_M_contig101460.306.1|Name=mRNA_M-pyrifera_M_contig101460.306.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig101460:255..668- (Macrocystis pyrifera P11B4 male)
AAACGGGATACGACATTCGTTCTGGTTTCCCGAGCACCATTGGAAAAACT
TCAGAAATATCAGGCCGAACAGGGATGGGACCGCACCTGGGTCTCTTCAT
TCGAAAGTGACTTCAACTACGATTTCCATGTCACACTCGACGAAACCGTT
GCTCCGCCTGAATATAACTATCGCAGCCAGAAAGAACTGCAGCAGCGAAA
GGAGGCGGAACCATTTTTCCTCTCAGGCGAACTGCACGGGGTTAGTGTCT
TTTTCCGTGTGGGCGACGATGTTTATCACACCTATTCGACCTACGCCCGG
GGATGTGAAAGCCTGACCGATTCCTTTCGTCTGCTGGACCTGACCCCCTA
TGGTCGCCAGGAAGAATTCGAAGATTCCCCAGCTGGCTGGCCCCAGAAGC
CCACTTACGGTTAAAAACGGGATACGACATTCGTTCTGGTTTCCCGAGCA
CCATTGGAAAAACTTCAGAAATATCAGGCCGAACAGGGATGGGACCGCAC
CTGGGTCTCTTCATTCGAAAGTGACTTCAACTACGATTTCCATGTCACAC
TCGACGAAACCGTTGCTCCGCCTGAATATAACTATCGCAGCCAGAAAGAA
CTGCAGCAGCGAAAGGAGGCGGAACCATTTTTCCTCTCAGGCGAACTGCA
CGGGGTTAGTGTCTTTTTCCGTGTGGGCGACGATGTTTATCACACCTATT
CGACCTACGCCCGGGGATGTGAAAGCCTGACCGATTCCTTTCGTCTGCTG
GACCTGACCCCCTATGGTCGCCAGGAAGAATTCGAAGATTCCCCAGCTGG
CTGGCCCCAGAAGCCCACTTACGGTTAA
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