mRNA_M-pyrifera_M_contig114688.3059.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A6I2YFP8_9ACTN (Acyl-CoA dehydrogenase n=2 Tax=root TaxID=1 RepID=A0A6I2YFP8_9ACTN) HSP 1 Score: 300 bits (769), Expect = 1.860e-98 Identity = 143/189 (75.66%), Postives = 163/189 (86.24%), Query Frame = 1
Query: 1 ITNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
++N SV DIILVFAET+PENRPH+HASIF+VP TPG++I RDIPTM+HPD E+G GNHA + F R+PADHLIG PGDGFVLAQKRLGGGRIHH+MRW+GQA R+ DIMCERAVSRESHGKLLG HQMIQD++A SH EIE+ARLLTF TAW MD+LGASAVR ++ MVKA VSR VL VLDRTIQ
Sbjct: 166 VSNGSVADIILVFAETDPENRPHRHASIFIVPAGTPGMDIRRDIPTMAHPDVEFGAAGNHAEIVFSNCRLPADHLIGRPGDGFVLAQKRLGGGRIHHAMRWIGQASRALDIMCERAVSRESHGKLLGQHQMIQDFIALSHTEIEAARLLTFHTAWKMDQLGASAVRADISMVKAHVSRVVLTVLDRTIQ 354
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A538DAX9_9ACTN (Acyl-CoA dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DAX9_9ACTN) HSP 1 Score: 297 bits (761), Expect = 1.290e-97 Identity = 143/189 (75.66%), Postives = 163/189 (86.24%), Query Frame = 1
Query: 1 ITNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
ITNASV DI+LVFAETNPE RPHKHAS+ VVP+ TPG+EIVRDI TM+HP++ YGR GNHA + F R+P DHLIGAPG GFVLAQ+RLGGGRIHH+MRWLGQA+RS DIMCERAVSR SHGKLLG HQM+QDY+A SH EI++ARLLTF TAW MD+ GA+ VR +LGMVKA VS+TVL VLDRTIQ
Sbjct: 144 ITNASVADIVLVFAETNPEGRPHKHASVIVVPSGTPGMEIVRDIATMAHPNSVYGRAGNHAEIVFRDCRVPLDHLIGAPGAGFVLAQQRLGGGRIHHAMRWLGQAQRSLDIMCERAVSRTSHGKLLGQHQMVQDYIALSHTEIQAARLLTFHTAWKMDKFGAARVRADLGMVKAHVSKTVLGVLDRTIQ 332
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: UPI0004BF3720 (acyl-CoA dehydrogenase family protein n=1 Tax=Streptacidiphilus jeojiense TaxID=436229 RepID=UPI0004BF3720) HSP 1 Score: 295 bits (755), Expect = 2.030e-96 Identity = 144/189 (76.19%), Postives = 162/189 (85.71%), Query Frame = 1
Query: 1 ITNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
ITN SV DI+LVFAET PE RPH+HAS+FVVP TPG+EIVRDI TM+ PDA +GR GNHA +RF R+ +HLIGAPG+GFVLAQ+RLGGGRIHH+MRWLGQA+RS DIMCERAVSR SHG+LLG HQM+QDYVA SHMEI++ARLLTFRTAW MDR GA AVR ELGMVKA VS+ VL VLDRTIQ
Sbjct: 166 ITNGSVADIVLVFAETTPEGRPHRHASVFVVPAGTPGMEIVRDIGTMAAPDAVFGRPGNHAEIRFRDCRVSGEHLIGAPGEGFVLAQQRLGGGRIHHAMRWLGQAQRSLDIMCERAVSRTSHGRLLGEHQMVQDYVALSHMEIQAARLLTFRTAWRMDRDGARAVRAELGMVKAHVSKVVLGVLDRTIQ 354
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A318HKT5_9MYCO (Alkylation response protein AidB-like acyl-CoA dehydrogenase n=2 Tax=Mycolicibacterium moriokaense TaxID=39691 RepID=A0A318HKT5_9MYCO) HSP 1 Score: 294 bits (753), Expect = 4.190e-96 Identity = 141/188 (75.00%), Postives = 159/188 (84.57%), Query Frame = 1
Query: 4 TNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
TNAS DI+LV AETNPE RPH+HASIFVVP TPG+ IVRDIPTM HPD EYGR GNH+ + F R+PADHLIG PG+GF LAQ+RLGGGRIHHSMRWLGQA+RS DIMCERAVSR SHG+ L HQMIQDY+A SHMEI++ARLLTF+TAW MD+ GASAVR +LGM+KA VS+ VL VLDRTIQ
Sbjct: 168 TNASSADIVLVVAETNPEGRPHRHASIFVVPAGTPGMTIVRDIPTMGHPDTEYGRVGNHSEILFTDCRVPADHLIGDPGEGFQLAQQRLGGGRIHHSMRWLGQAQRSLDIMCERAVSRSSHGRRLADHQMIQDYIALSHMEIQAARLLTFQTAWKMDKFGASAVRADLGMIKAHVSKVVLGVLDRTIQ 355
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A378RD00_9MYCO (Acyl-CoA dehydrogenase domain-containing protein n=9 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A378RD00_9MYCO) HSP 1 Score: 290 bits (743), Expect = 1.320e-94 Identity = 142/188 (75.53%), Postives = 162/188 (86.17%), Query Frame = 1
Query: 4 TNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
TNAS DIILV AET+P+ RPH+HASIFVVPTDTPGLEIVR+IPTM+H D EYGR GNHA + F R+PADHLIG G GF+LAQ+RLGGGRIHH+MRWLGQA+R+ DIM ERAVSR+SHG+LLG HQM+QDY+A SH EI++ARLLTF TAW MDRLGASAVR +LGMVKA VS+ VL VLDRTIQ
Sbjct: 167 TNASCADIILVVAETDPDKRPHRHASIFVVPTDTPGLEIVREIPTMAHSDPEYGRRGNHAEVMFRDCRVPADHLIGQRGAGFLLAQQRLGGGRIHHAMRWLGQAQRALDIMGERAVSRQSHGRLLGEHQMVQDYIALSHTEIQAARLLTFHTAWKMDRLGASAVRADLGMVKAHVSKVVLAVLDRTIQ 354
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A7Y5UBM5_9ACTN (Acyl-CoA dehydrogenase n=1 Tax=Streptomycetaceae bacterium TaxID=2021369 RepID=A0A7Y5UBM5_9ACTN) HSP 1 Score: 290 bits (741), Expect = 2.810e-94 Identity = 137/189 (72.49%), Postives = 158/189 (83.60%), Query Frame = 1
Query: 1 ITNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
ITNASV D +LVFAET+PE RPH+HAS+FVVP TPG+EIVRDIPTM HP+ +GR GNHA + F R+ DHLIG PGDGFVLAQ+RLGGGRIHH+MRWLGQA+R+ DIMCERAVSR SHG+ LG HQM+QD++A SH +I++ARLLTFRTAW MDRLGA VR ELGMVKA VS+ VL VLDR IQ
Sbjct: 166 ITNASVADFVLVFAETSPEGRPHRHASVFVVPAGTPGMEIVRDIPTMGHPERSFGRPGNHAEIVFSDCRVSGDHLIGGPGDGFVLAQQRLGGGRIHHAMRWLGQAQRALDIMCERAVSRTSHGRTLGQHQMVQDFIAVSHTDIQAARLLTFRTAWRMDRLGAREVRAELGMVKAHVSKVVLAVLDRAIQ 354
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A024JZN5_9MYCO (Acyl-CoA dehydrogenase domain-containing protein n=7 Tax=Mycobacterium simiae complex TaxID=2249310 RepID=A0A024JZN5_9MYCO) HSP 1 Score: 285 bits (730), Expect = 1.210e-92 Identity = 139/188 (73.94%), Postives = 158/188 (84.04%), Query Frame = 1
Query: 4 TNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
TNAS DIILV AET+P RPH+HASIFVVPT TPG +IVRDIPTM+HPD E+GR GNHA + F R+PADHL+G G GFVLAQ+RLGGGRIHHSMRWLGQA+R+ DIM ERAVSR SHG+LLG HQM+QDY+A SH EI++ARLLTF+TAW MDRLGA VR ELGM+KA VS+ VL VLDRTIQ
Sbjct: 167 TNASCADIILVVAETDPAGRPHRHASIFVVPTGTPGCDIVRDIPTMAHPDPEFGRRGNHAEVVFTDCRVPADHLVGPRGGGFVLAQQRLGGGRIHHSMRWLGQAQRALDIMGERAVSRRSHGRLLGEHQMVQDYIALSHTEIQAARLLTFQTAWKMDRLGAGEVRAELGMIKAHVSKVVLAVLDRTIQ 354
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A1X1THE5_9MYCO (Acyl-CoA dehydrogenase n=5 Tax=Mycobacterium TaxID=1763 RepID=A0A1X1THE5_9MYCO) HSP 1 Score: 279 bits (714), Expect = 3.350e-90 Identity = 136/188 (72.34%), Postives = 157/188 (83.51%), Query Frame = 1
Query: 4 TNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
TNAS DI+LV AET+P RPH+HASIFVVP TPG++I+R+IPTM HPD EYGR GNHA + F R+P DHLIGA G+GF LAQ+RLGGGRIHH+MRWLGQA+R+ DIM ERAVSR SHG+LLG HQM+QDY+A SH EI++ARLLTF+TAW MDR GASAVR ELGMVKA VS+ VL VLDR IQ
Sbjct: 167 TNASCADIVLVVAETDPAGRPHRHASIFVVPAGTPGMQILREIPTMGHPDPEYGRRGNHAEVVFHECRVPGDHLIGARGEGFRLAQQRLGGGRIHHAMRWLGQAQRALDIMGERAVSRRSHGRLLGEHQMVQDYIALSHTEIQAARLLTFQTAWKMDRDGASAVRAELGMVKAHVSKVVLAVLDRAIQ 354
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A2D6N099_9DELT (Acyl-CoA dehydrogenase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6N099_9DELT) HSP 1 Score: 272 bits (695), Expect = 2.390e-87 Identity = 125/188 (66.49%), Postives = 153/188 (81.38%), Query Frame = 1
Query: 4 TNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
TN S+ D I+V ETNPE RP+KHAS+FVV DTPG+ I+RDIPTM+HPD E+G GNHA + F+G R+P+DHLIGAPGDGFVLAQKRLGGGRIHH+MRW+GQA+R+ +I CERAVSRESHG+ L HQM+QD++ S EIE+ARL+TF+ AW MD++GA A R ++ M KA SR VLDVLDR IQ
Sbjct: 167 TNGSMADFIIVMVETNPEGRPYKHASMFVVERDTPGMNILRDIPTMAHPDPEFGALGNHAEILFEGCRVPSDHLIGAPGDGFVLAQKRLGGGRIHHAMRWIGQAKRALEITCERAVSRESHGRHLAQHQMVQDFIYRSRSEIEAARLITFQAAWKMDKIGAHAARADISMAKAFTSRMVLDVLDRGIQ 354
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Match: A0A1E3SPJ0_9MYCO (Acyl-CoA_dh_1 domain-containing protein n=1 Tax=Mycobacterium sherrisii TaxID=243061 RepID=A0A1E3SPJ0_9MYCO) HSP 1 Score: 230 bits (587), Expect = 1.050e-73 Identity = 111/152 (73.03%), Postives = 128/152 (84.21%), Query Frame = 1
Query: 112 LEIVRDIPTMSHPDAEYGRTGNHAYLRFDGARIPADHLIGAPGDGFVLAQKRLGGGRIHHSMRWLGQARRSFDIMCERAVSRESHGKLLGAHQMIQDYVATSHMEIESARLLTFRTAWNMDRLGASAVRHELGMVKALVSRTVLDVLDRTIQ 567
+ IVRDIPTM+HPD E+GR GNHA + F R+P DHLIG G GFVLAQ+RLGGGRIHHSMRWLGQA+R+ DIM ERAVSR SHG+LLG HQM+QDY+A SH EI++ARLLTF+TAW MDR GA+AVR ELGM+KA VS+ VL VLDRTIQ
Sbjct: 1 MTIVRDIPTMAHPDPEFGRRGNHAEVVFTDCRVPGDHLIGPRGGGFVLAQQRLGGGRIHHSMRWLGQAQRALDIMGERAVSRRSHGRLLGEHQMVQDYIALSHTEIQAARLLTFQTAWKMDRYGAAAVRAELGMIKAHVSKVVLAVLDRTIQ 152 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114688.3059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114688.3059.1 >prot_M-pyrifera_M_contig114688.3059.1 ID=prot_M-pyrifera_M_contig114688.3059.1|Name=mRNA_M-pyrifera_M_contig114688.3059.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp ITNASVTDIILVFAETNPENRPHKHASIFVVPTDTPGLEIVRDIPTMSHPback to top mRNA from alignment at M-pyrifera_M_contig114688:3..569- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114688.3059.1 ID=mRNA_M-pyrifera_M_contig114688.3059.1|Name=mRNA_M-pyrifera_M_contig114688.3059.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig114688:3..569- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114688:3..569- >mRNA_M-pyrifera_M_contig114688.3059.1 ID=mRNA_M-pyrifera_M_contig114688.3059.1|Name=mRNA_M-pyrifera_M_contig114688.3059.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig114688:3..569- (Macrocystis pyrifera P11B4 male)back to top |