mRNA_M-pyrifera_M_contig114682.3056.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A7Y2IV52_9ACTN (Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IV52_9ACTN) HSP 1 Score: 331 bits (849), Expect = 4.000e-114 Identity = 167/175 (95.43%), Postives = 171/175 (97.71%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 525
GSECLLFGGL STYLLYKTRRGPGP+N TIPTDIFDIPFTSVSSFVLLMSSLTMVLALSAL+RGDN ATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSL+VASKQGKLTP +TETVEIVGLYWHFVDVVWIFIFTVIYLIPVE
Sbjct: 33 GSECLLFGGLISTYLLYKTRRGPGPENTTIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALTRGDNQATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLFVASKQGKLTPNNTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 207
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A6B1AYN8_9ACTN (Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AYN8_9ACTN) HSP 1 Score: 297 bits (760), Expect = 5.160e-101 Identity = 148/173 (85.55%), Postives = 161/173 (93.06%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 519
GSECLLFGGL STYLLYKTRRGP DN+ IPTD+FDIPFTS+SSFVLLMSSLTMVLAL+A++RGDN R WLLAT+MLGGVFIGGQVYEFTSFLREGVGFT+NPASSAFY LTGFHGVHVSLGIVMLMSL+VAS QGKL +H+ETVE+VGLYWHFVDVVWIFIFTVIYL+P
Sbjct: 6 GSECLLFGGLISTYLLYKTRRGP--DNLAIPTDVFDIPFTSISSFVLLMSSLTMVLALAAITRGDNHGARVWLLATSMLGGVFIGGQVYEFTSFLREGVGFTNNPASSAFYALTGFHGVHVSLGIVMLMSLFVASWQGKLRQEHSETVEVVGLYWHFVDVVWIFIFTVIYLVP 176
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A7K2E241_9ACTN (Cytochrome aa3 subunit 3 n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E241_9ACTN) HSP 1 Score: 275 bits (704), Expect = 5.430e-92 Identity = 143/175 (81.71%), Postives = 158/175 (90.29%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 525
GSECLLFGGL STYLLYKTR G G T+PTD+FDIPFTSVSSFVLLMSSLTMVLALSA++RG+ A R WLLATA+LGGVFIGGQVYEFT+F+REGV FT NPASSAF+TLTGFHGVHVSLGIVMLMSL+VAS +GKLT ++ ETVEIVGLYWHFVD+VWIFIFTVIYLIP +
Sbjct: 40 GSECLLFGGLISTYLLYKTR-GNGR---TLPTDVFDIPFTSVSSFVLLMSSLTMVLALSAVTRGEAEAGRTWLLATALLGGVFIGGQVYEFTAFVREGVAFTTNPASSAFFTLTGFHGVHVSLGIVMLMSLFVASLKGKLTQRNAETVEIVGLYWHFVDIVWIFIFTVIYLIPAD 210
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A3M2GJ07_ACTSX (Cytochrome aa3 subunit 3 n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GJ07_ACTSX) HSP 1 Score: 263 bits (673), Expect = 2.320e-87 Identity = 131/175 (74.86%), Postives = 154/175 (88.00%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 525
GSECLLFGGL STYLLYKT+ G +PTD+FDIPFTSVSSFVLLMSS+TMVLAL+A++RGD RAWLLATA+ G VFIGGQVYEFT+F+REG+GFT NPA+SAF+TLTGFHGVHV++GIVMLMSL+V S +GK+T ++ ETVEIVGLYWHFVD+VWIFIFTV+YLIP +
Sbjct: 33 GSECLLFGGLISTYLLYKTKDAGGT---VLPTDVFDIPFTSVSSFVLLMSSMTMVLALAAVARGDQQRGRAWLLATALQGMVFIGGQVYEFTTFVREGMGFTTNPAASAFFTLTGFHGVHVTIGIVMLMSLFVMSLKGKITAENAETVEIVGLYWHFVDIVWIFIFTVVYLIPAD 204
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A2E6VL82_9ACTN (Cytochrome aa3 subunit 3 n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E6VL82_9ACTN) HSP 1 Score: 257 bits (656), Expect = 3.730e-85 Identity = 132/173 (76.30%), Postives = 147/173 (84.97%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 519
GSECLLFGGL STYL+Y++R GP P DIFDIPFTSVSSFVLLMSSLTMVLALSAL RGD R WLL TA+LG +FIGGQVYEFT+FLREG+G+T +P SSAF+TLTGFHGVHVS+GIVMLMSLYV+S +G L + ETVEIVGLYWHFVDVVWIFIFTVIYL+P
Sbjct: 6 GSECLLFGGLISTYLIYRSRFADGP----APGDIFDIPFTSVSSFVLLMSSLTMVLALSALQRGDYRNNRLWLLTTALLGALFIGGQVYEFTTFLREGLGYTTSPFSSAFFTLTGFHGVHVSIGIVMLMSLYVSSMRGNLRRESAETVEIVGLYWHFVDVVWIFIFTVIYLVP 174
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A7C7S7G5_9ACTN (Cytochrome aa3 subunit 3 n=13 Tax=root TaxID=1 RepID=A0A7C7S7G5_9ACTN) HSP 1 Score: 256 bits (655), Expect = 9.400e-85 Identity = 131/173 (75.72%), Postives = 149/173 (86.13%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 519
GSECLLFGGL STYL+Y++R GP P DIFDIPFTSVSSFVLLMSSLTMVL+LSAL RGD R WLLATA+LG +FIGGQVYEFT+FLREG+G+T +P SSAF+TLTGFHG+HVSLGIVML+SL +AS +G LT + +ETVEIVGLYWHFVDVVWIFIFTVIYL+P
Sbjct: 23 GSECLLFGGLISTYLIYRSRYADGP----APGDIFDIPFTSVSSFVLLMSSLTMVLSLSALQRGDIRNNRVWLLATALLGSLFIGGQVYEFTTFLREGLGYTTSPFSSAFFTLTGFHGIHVSLGIVMLVSLLIASFRGTLTKERSETVEIVGLYWHFVDVVWIFIFTVIYLVP 191
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A2E5ZJ58_9ACTN (Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZJ58_9ACTN) HSP 1 Score: 257 bits (657), Expect = 9.760e-85 Identity = 132/173 (76.30%), Postives = 149/173 (86.13%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 519
GSECLLFGGL STYL+Y++R G GP P DIFDIPFTSVSSFVLLMSSLTMVL+LSAL RGD R WLL TA+LG +FIGGQVYEFT+FLREG+G+T +P SSAF+TLTGFHGVHVSLGIVMLMSL ++S +G LT + +ETVEIVGLYWHFVDVVWIFIFTVIYL+P
Sbjct: 45 GSECLLFGGLISTYLIYRSRFGDGP----APGDIFDIPFTSVSSFVLLMSSLTMVLSLSALQRGDIRNNRIWLLTTALLGALFIGGQVYEFTTFLREGLGYTTSPFSSAFFTLTGFHGVHVSLGIVMLMSLLISSFRGTLTKERSETVEIVGLYWHFVDVVWIFIFTVIYLVP 213
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A2D8LVE1_9ACTN (Cytochrome aa3 subunit 3 n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LVE1_9ACTN) HSP 1 Score: 254 bits (650), Expect = 8.110e-84 Identity = 131/174 (75.29%), Postives = 148/174 (85.06%), Query Frame = 1
Query: 4 SECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIPVE 525
+ECLLFG L STYL+YKTR G G +PTD+FDIPFTSVSSFVLLMSSLTMVLALSA R D +AWLL TAMLG VF+GGQ YEFT+F EG+G+T NPA+SAFYTLTGFHG HVS+GI+MLMSL+VA+ QGKLT K++ETVEIVGLYWHFVD+VWIFIFTVIYLIP E
Sbjct: 38 TECLLFGALISTYLIYKTR-GNGE---VLPTDLFDIPFTSVSSFVLLMSSLTMVLALSAFGRNDLDRGKAWLLVTAMLGAVFMGGQAYEFTAFYEEGLGYTTNPAASAFYTLTGFHGAHVSIGIIMLMSLWVAANQGKLTGKNSETVEIVGLYWHFVDLVWIFIFTVIYLIPPE 207
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A0C1USF1_9ACTN (Cytochrome aa3 subunit 3 n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A0C1USF1_9ACTN) HSP 1 Score: 254 bits (648), Expect = 1.020e-83 Identity = 130/173 (75.14%), Postives = 147/173 (84.97%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYLIP 519
GSECLLFG L STYLLY+ + GP P DIFDIPFTSVSSFVLLMSSLTMVLALSAL +GD R WLL TA+LG VFIGGQVYEFT+F+REG+G+T +P SSAF+TLTGFHGVHVSLGIVM+MSL ++S +GKLT K+TETVEI+GLYWHFVDVVWI IFTVIYL+P
Sbjct: 21 GSECLLFGALISTYLLYRNKFYDGP----APGDIFDIPFTSVSSFVLLMSSLTMVLALSALQKGDIRNNRLWLLTTALLGAVFIGGQVYEFTTFIREGLGYTTSPFSSAFFTLTGFHGVHVSLGIVMIMSLLISSYRGKLTKKNTETVEIIGLYWHFVDVVWIIIFTVIYLVP 189
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Match: A0A7Y2D9K3_9ACTN (Cytochrome aa3 subunit 3 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2D9K3_9ACTN) HSP 1 Score: 251 bits (641), Expect = 7.170e-83 Identity = 125/171 (73.10%), Postives = 146/171 (85.38%), Query Frame = 1
Query: 1 GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSSLTMVLALSALSRGDNPATRAWLLATAMLGGVFIGGQVYEFTSFLREGVGFTHNPASSAFYTLTGFHGVHVSLGIVMLMSLYVASKQGKLTPKHTETVEIVGLYWHFVDVVWIFIFTVIYL 513
GSECLLFGGL STY+LY+ GPD ++FDIPFTSVSSFVLLMSSLTMVLALSA++RGD+ TR WLL TA+LGG+FIGGQVYEFT F EG+G+T +P SSAFYTLTGFHGVHV+LGI+MLMSLYV+S +GKL ++ ETVE+VGLYWHFVDVVW+FIFTV+YL
Sbjct: 6 GSECLLFGGLISTYMLYRNNHQDGPD----AAELFDIPFTSVSSFVLLMSSLTMVLALSAITRGDHQRTRLWLLTTALLGGLFIGGQVYEFTVFYEEGLGYTTSPFSSAFYTLTGFHGVHVTLGIMMLMSLYVSSLRGKLHQRNAETVELVGLYWHFVDVVWVFIFTVVYL 172 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114682.3056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114682.3056.1 >prot_M-pyrifera_M_contig114682.3056.1 ID=prot_M-pyrifera_M_contig114682.3056.1|Name=mRNA_M-pyrifera_M_contig114682.3056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp GSECLLFGGLFSTYLLYKTRRGPGPDNITIPTDIFDIPFTSVSSFVLLMSback to top mRNA from alignment at M-pyrifera_M_contig114682:3..530+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114682.3056.1 ID=mRNA_M-pyrifera_M_contig114682.3056.1|Name=mRNA_M-pyrifera_M_contig114682.3056.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig114682:3..530+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114682:3..530+ >mRNA_M-pyrifera_M_contig114682.3056.1 ID=mRNA_M-pyrifera_M_contig114682.3056.1|Name=mRNA_M-pyrifera_M_contig114682.3056.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig114682:3..530+ (Macrocystis pyrifera P11B4 male)back to top |