prot_M-pyrifera_M_contig11467.3052.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11467.3052.1
Unique Nameprot_M-pyrifera_M_contig11467.3052.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length397
Homology
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BLAST of mRNA_M-pyrifera_M_contig11467.3052.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.370e-36
Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0 
Query:  308 GLRKRPRREDQADAQEESRRAAWQVQVQEDSKNRMEESHKVEKMIGELGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQASLAK 396
            GLRKRP RED  DA+EESRRAAWQVQVQEDSK R++ESHKVEKMIG+LGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQA LAK
Sbjct:  369 GLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAK 457
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BLAST of mRNA_M-pyrifera_M_contig11467.3052.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 6.090e-11
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:  351 MIGELGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQASLAK 396
            MIGELGHMFS+FS +VAAQEE V+HIEDDVE AH FA +G A L++
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSR 46
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BLAST of mRNA_M-pyrifera_M_contig11467.3052.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 57.0 bits (136), Expect = 8.420e-7
Identity = 30/63 (47.62%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:  334 VQEDSKNRMEESHKVEKMIGELGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQASLAK 396
            +++ S+ R++ +H +EK IG+LG +FSRFS++VA Q EVV  ++DDVE A    E G A L K
Sbjct:    2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLK 64
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11467.3052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE2.370e-3689.89t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835ZFW2_9STRA6.090e-1171.74t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y6L6_AURAN8.420e-747.62t-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 330..396
e-value: 0.0094
score: 25.1
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 335..396
score: 11.095
NoneNo IPR availableGENE3D1.20.5.110coord: 336..396
e-value: 1.1E-9
score: 39.8
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 331..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11467contigM-pyrifera_M_contig11467:4882..9140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11467.3052.1mRNA_M-pyrifera_M_contig11467.3052.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11467 4882..9140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11467.3052.1 ID=prot_M-pyrifera_M_contig11467.3052.1|Name=mRNA_M-pyrifera_M_contig11467.3052.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=397bp
PEAEKACGAKRLQQQSRGGDKRRNEAFRGRRGGPPGGHRLFAEIRRGQRK
GRSASQQPAAEALPLHRGDAAEERPRTHQGLQGRAFTARGGGEAAERPPA
HLLALRRRHPSRSAALPSLRNIDTNSGLRSRSGRRRPAASPPPPALSLAP
PRKGGRGDGNGRPTDPRAFSESDNRNSRGGDFSGSGAGGDYHAEKEPPQS
SQYPPPPPPPWPPGGVAGAGGGAGPGGDAQQATAAAAAAAGVGATATAAR
AAAGSSGGDRAGPQGERGYAAGYGGGDGGRAAGGGAGAAGMNGAAPGASV
KSPTVGAGLRKRPRREDQADAQEESRRAAWQVQVQEDSKNRMEESHKVEK
MIGELGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQASLAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR010989SNARE