mRNA_M-pyrifera_M_contig114532.3034.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A7V2IQ95_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V2IQ95_9BACT) HSP 1 Score: 134 bits (338), Expect = 1.470e-33 Identity = 73/186 (39.25%), Postives = 107/186 (57.53%), Query Frame = 1
Query: 1 GVNYARIWL--GFNSPFFMQTVQAGLGKLDLSCAWRVDELLGYAASFDVRLMLSLYSYNVLRPDHQYNGCWDDCNQFA-HFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGAQDYDVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGNDSVDFAQTHVY 549
G N+AR+WL G+N + T ++G ++DL AW +D +L A D+RLML + S+NVLR + G W++ H + P ++FT + RY+VARYG+S HV ++EF NEVD +YD WH A+ +RA D + +HL++TSFA PG P +D + +DF QTH Y
Sbjct: 191 GCNFARLWLSPGWND-LCLVTRESGYDRIDLQRAWHLDYVLELAEKHDLRLMLCIDSFNVLRSTQRLYGDWENSPLHPDHGGPVGRPREFFTGEPMRRAYRNRLRYLVARYGYSPHVFAWEFFNEVDIVDEYDSAAVTAWHREMARHLRALDPH-DHLITTSFAHPPGDPAVDALEELDFVQTHHY 374
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A4Q3VGF0_9BACT (Mannan endo-1,4-beta-mannosidase n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3VGF0_9BACT) HSP 1 Score: 118 bits (296), Expect = 1.320e-27 Identity = 76/189 (40.21%), Postives = 102/189 (53.97%), Query Frame = 1
Query: 1 GVNYARIWLGFNSPFF--MQTVQAGLGKLDLSCAWRVDELLGYAASFDVRLMLSLYSYNVLRPDHQYNGCWDDCNQFAHFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGAQDYDVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGND----SVDFAQTHVY 549
G N+ R+WL +P + + + G G +DL+ AWR+D +LG A +RL L + SYNVLR + A+ LA P D++TDP A L RY+VARYG S+ V S+EF NEVDG DYD TWH A ++A D Y HL++TSF + G D +D+AQTH Y
Sbjct: 204 GANWGRLWL---APHWTTLALERPGGGPIDLANAWRLDYVLGLAERNGMRLALCIESYNVLRDKINWPEWERSPLNKANGGPLARPADFWTDPEAARLFRAKLRYIVARYGASSSVMSWEFWNEVDGITDYDAAKVRTWHTQMAGHLKAMDPY-RHLVTTSFGGY-GAAAGDAETFKIPGLDYAQTHSY 387
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A4Q3VVQ6_9BACT (Mannan endo-1,4-beta-mannosidase n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3VVQ6_9BACT) HSP 1 Score: 113 bits (283), Expect = 7.430e-26 Identity = 73/187 (39.04%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 1 GVNYARIWLGFNSPFFMQTVQAGLGKLDLSCAWRVDELLGYAASFDVRLMLSLYSYNVLRPDHQYNGCWDDCNQFAHFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGAQDYDVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGND----SVDFAQTHVY 549
G N+ R+WL + F + G G +DL AWR+D +LG A +RL L + SYNVLR + ++ LA P D++TDP A RY+VARYG S+ V S+EF NEVDG DYD WH A ++A D Y HL++TSF + G D +D+AQTH Y
Sbjct: 204 GANWGRLWLAPHWTTFALE-RPGQGPIDLGNAWRLDRVLGLAERSGMRLALCIESYNVLRDKINWPEWERSPLNRSNGGPLARPADFWTDPEAARRFRSKLRYLVARYGASSAVMSWEFWNEVDGITDYDAAKVRAWHERMANHLKAVDPY-RHLVTTSFGGY-GAAAGDAETFKMPGLDYAQTHSY 387
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A2T6DZ38_9BACT (Mannan endo-1,4-beta-mannosidase n=1 Tax=Opitutaceae bacterium EW11 TaxID=2161865 RepID=A0A2T6DZ38_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 8.210e-18 Identity = 61/197 (30.96%), Postives = 94/197 (47.72%), Query Frame = 1
Query: 1 GVNYARIWLGFNSPFFM--QTVQAGLGKLDLSCAWRVDELLGYAASFDVRLMLSLYSYNVLRPDHQYNGCWDDCNQF--------AHFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGA----QDYDVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGNDSVDFAQTHVY 549
G N+AR+W+ SP+ M + Q L + AW +D ++ A + ++S + + + Q W N F A+ A P D+FTDP+A ++++ RY++ARYG+SAH+ S++F NE+D Q N WH A+ +R D Y HL+STS P +DFA H Y
Sbjct: 244 GENFARLWM---SPWDMGLEHGQGYLNRYRQDAAWSLDYVVSLAEQNGIYFLISFDHHGMYQTSSQN---WGGSNNFWNVNPYNAANGGPCAQPNDFFTDPKAKGIYQKRLRYLIARYGYSAHLLSWQFFNEIDNVFQPGQSLVGNDVVAWHREMAQWLRKNDPY-RHLISTSLTGGSDRPEFWNLPELDFAVYHSY 433
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A7V4NGR7_9BACT (DUF5060 domain-containing protein n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A7V4NGR7_9BACT) HSP 1 Score: 86.3 bits (212), Expect = 2.540e-16 Identity = 53/188 (28.19%), Postives = 94/188 (50.00%), Query Frame = 1
Query: 1 GVNYARIWLGFNSPFFM-----QTVQAGLGKLDLSCAWRVDELLGYAASFDVRLMLSLYSYNVLRPDHQYNGCWDDCNQFAHFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGAQDYDVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGNDSVDFAQTHVY 549
G N+ R+W N P+ + + GLG+ + ++ D+++ A S + + L + + + + + + P+++F D A ++R RY+VAR+G+S + S+EF NEVD DYD + A WH A ++ D +A HL++TSFA+ I + + +AQTH+Y
Sbjct: 559 GQNWTRLW---NCPWGLIIEWGEPRGQGLGRYNQKDSFEFDKIIELAESLGIYIQFCLDYHGAFHKEITWE---QNAYNYKNGGPCKEPIEFFKDSTAKEYYKRRLRYIVARWGYSRAIMSWEFFNEVDLISDYDEKLVADWHKEMANYLKEID-FAKHLITTSFARAFAGDKIYSLEEISYAQTHMY 739
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A1J5SI77_9ZZZZ (Mannan endo-1,4-beta-mannosidase n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5SI77_9ZZZZ) HSP 1 Score: 85.1 bits (209), Expect = 5.960e-16 Identity = 61/193 (31.61%), Postives = 98/193 (50.78%), Query Frame = 1
Query: 1 GVNYARIWL----GFNSPFFMQTVQAG--LGKLDLSCAWRVDELLGYAASFDVRLMLSLYSYNVLRPDHQYNGCWDDCNQFAHFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGAQDY----DVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGNDSVDFAQTHVY 549
G+++ R+W+ G N + +T+ A +G+LD + A R D+++G+A S V L L L + N + N L P ++FT+PRAL L +R FRY+VAR+ WS + ++E NEV Y A WH A +R+ D Y +HL++TS + +P+ ++D+ Q H Y
Sbjct: 178 GLDWMRVWMAHWDGMNLEWLPKTLGASPEIGRLDPAVAARWDDVIGHAQSDGVYLQLVLQHHGPYSSTVDSNWADNPFNAANPGGFLKTPAEFFTNPRALELTQRKFRYIVARWSWSTAIMAWELFNEVHWTDAYRNPATRPTVAAWHTRMAVFIRSVDVY-HHLVTTS-TEDLQSPIYA---ALDYYQPHCY 365
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A847JPI8_9BACT (DUF5060 domain-containing protein n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A847JPI8_9BACT) HSP 1 Score: 82.0 bits (201), Expect = 7.090e-15 Identity = 63/193 (32.64%), Postives = 98/193 (50.78%), Query Frame = 1
Query: 1 GVNYARIWL----GFNSPFFMQTVQAGLGKLDLSCAWRVDELLGYA--ASFDVRLMLSLYSYNVLRPDHQYNGC-WDDCNQFAHFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEV---DGAQDYDVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGNDSVDFAQTHVY 549
G N+ARIW+ G N + M T + G LDLS A + DE++ A A +++L + R + +N W+ N FL AG ++F +PRA+AL + +RY+VAR+G+S + ++E NEV D + A WH AK +R +D Y + + ++S PG S+D+ Q H Y
Sbjct: 224 GGNWARIWMCHWGGANLDWVMNT-KIEEGSLDLSVARKWDEIVREAEKAGIHFQMVLQHHGQYSTRVNPNWNEHPWNKAN--GGFLTTAG--EFFVNPRAVALTQAKYRYIVARWGYSPSIMAWELFNEVEWTDAIAGKHADEVAAWHDGMAKFIRQQDPYRHLVTTSSSLDIPGLW-----QSMDYRQPHSY 406
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A1V6DLB1_9BACT (Cellulase domain-containing protein n=1 Tax=Verrucomicrobia bacterium ADurb.Bin118 TaxID=1852928 RepID=A0A1V6DLB1_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 3.160e-14 Identity = 61/193 (31.61%), Postives = 91/193 (47.15%), Query Frame = 1
Query: 1 GVNYARIWLGFNSPFFMQTVQAGLGKLDLSCAWRVDELLGYAAS--FDVRLMLSLYSYNVLRPDHQY-NGCWDDCNQFAHFLNLAG------PMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGAQDY-DVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGNDSVDFAQTHVY 549
G NY R+W+ S F ++T L + L AWR+D +L A F V L L + PD+ N W H N+A P +FT+ A ++++ RY+VARYG+S ++ S++F NE+D D N A WHA +RA D + HL++TSF + +D+ H Y
Sbjct: 5 GENYLRLWMCPWS-FGLETAADSLNRYRLDEAWRLDYVLQQAEQRGFYVELCLDYHGMFASEPDYWGGNDYWPK-----HPYNVAQGGPCATPNAFFTNTTARTIYQKRLRYLVARYGYSPNLLSWQFFNEIDNVYSVLDANDVAAWHAVMGDWLRAHDPF-QHLITTSFTTADPHAEMWSLPQMDYVCIHSY 190
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: UPI0013794A73 (DUF5060 domain-containing protein n=1 Tax=Pseudoclostridium thermosuccinogenes TaxID=84032 RepID=UPI0013794A73) HSP 1 Score: 80.1 bits (196), Expect = 3.190e-14 Identity = 59/187 (31.55%), Postives = 96/187 (51.34%), Query Frame = 1
Query: 1 GVNYARIWLGFNSPFFMQTVQAGLGKLD--LSCAWRVDELLGYAASFDVRLMLSLYSYNVLRPDHQYNGCWDDCNQF--AHFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGAQDYDVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGTPLIDGNDSVDFAQTHVY 549
G N+AR+W+G S F + GL L A+ +D++L A + +ML+ ++ N W + N F A+ L P ++FT+ +A A ++ RY+VAR+G+S H+ S+E NEV DYD V+ WH A +++ D Y+ HL+S+S A+ ++ +DF H Y
Sbjct: 267 GANFARVWMGSWS-FGLLWNDTGLEDYTNRLDRAYLLDKMLELAEDEGIYIMLTFINHGAYSA--VTNPQWQE-NPFNKANGGYLEKPSEFFTNEQAKAQFKKLMRYIVARWGYSTHIMSWELFNEVSWTDDYDPEVSNAWHKEMADYLKSIDPYS-HLVSSSSAK--AYDPLEKLRELDFINIHDY 446
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Match: A0A1G9T7N8_9BACT (Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Catalinimonas alkaloidigena TaxID=1075417 RepID=A0A1G9T7N8_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 3.330e-14 Identity = 60/192 (31.25%), Postives = 96/192 (50.00%), Query Frame = 1
Query: 4 VNYARIWL-GFN------SPFFMQTVQAGLGKLDLSCAWRVDELLGYAASFDVRLMLSLYSYNVLRPDHQYNGCWDDCNQF--AHFLNLAGPMDWFTDPRALALHERYFRYVVARYGWSAHVHSFEFENEVDGAQDYDVNVAATWHAWAAKSVRARDTYANHLLSTSFAQHPGT-PLIDGNDSVDFAQTHVY 549
+ + R WL GF P V AGLG+ + +D +L A + L L L + + + N WD+ N + A+ L+ P D+FT+ A+A ++ +RY+VAR+G+S ++ S+E NEV+ D + A WH + + D + HL+STS Q T PL+ N ++D Q H+Y
Sbjct: 194 ITWMRYWLAGFARQAIEWGPNHWSNVYAGLGRYSPEASVLLDSVLNLCAEKGIYLQLVLQHHGQVSTNVNPN--WDE-NPYNSANGGYLSNPADFFTNADAIAQTKKLYRYIVARWGYSPNILSWELFNEVEYTDGTDAAIDA-WHNTMSTYLHDLDPHG-HLVSTSTGQDNSTMPLLQDNAALDQVQYHIY 380 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114532.3034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig114532.3034.1 >prot_M-pyrifera_M_contig114532.3034.1 ID=prot_M-pyrifera_M_contig114532.3034.1|Name=mRNA_M-pyrifera_M_contig114532.3034.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp GVNYARIWLGFNSPFFMQTVQAGLGKLDLSCAWRVDELLGYAASFDVRLMback to top mRNA from alignment at M-pyrifera_M_contig114532:11..559- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig114532.3034.1 ID=mRNA_M-pyrifera_M_contig114532.3034.1|Name=mRNA_M-pyrifera_M_contig114532.3034.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig114532:11..559- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig114532:11..559- >mRNA_M-pyrifera_M_contig114532.3034.1 ID=mRNA_M-pyrifera_M_contig114532.3034.1|Name=mRNA_M-pyrifera_M_contig114532.3034.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig114532:11..559- (Macrocystis pyrifera P11B4 male)back to top |