mRNA_M-pyrifera_M_contig101449.303.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A518I9N4_9PLAN (Nickel and cobalt resistance protein CnrA n=11 Tax=Planctomycetaceae TaxID=126 RepID=A0A518I9N4_9PLAN) HSP 1 Score: 377 bits (969), Expect = 1.770e-120 Identity = 202/223 (90.58%), Postives = 216/223 (96.86%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 PIKLQEYNVSLQDVE AVQSNNLNASGGFI+ GQTERSVR+IGRLGA+T++VLDELRKAP+KMNGDRAVLL VA+IVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAAL DAE++LPADIVINT LF+LKSFIDRGIYYVEEALVIGA+LVVIVLFLFLLN RTTFITLTAIPLSLVITTLVFRIVG+++GTELSINVMTLGGIAVAIGELVD Sbjct: 267 PIKLQEYNVSLQDVEEAVQSNNLNASGGFILSGQTERSVRIIGRLGAITNEVLDELRKAPIKMNGDRAVLLENVAEIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALHDAETSLPADIVINTKLFKLKSFIDRGIYYVEEALVIGAVLVVIVLFLFLLNLRTTFITLTAIPLSLVITTLVFRIVGILTGTELSINVMTLGGIAVAIGELVD 489
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A517X2X5_9PLAN (Nickel and cobalt resistance protein CnrA n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X2X5_9PLAN) HSP 1 Score: 375 bits (964), Expect = 8.750e-120 Identity = 203/223 (91.03%), Postives = 215/223 (96.41%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 PIKLQEYNVSLQ+VEAAVQ+NNLNASGGFII GQTER VRVIGRLG+L +DVL+ELRKAPVKMNGDR VLL+ VA+I EGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAAL DAESTLPADIVINT+LFQLKSFIDRGIYYVEEALVIGA+LVVIVLFLFLLN RTTFITLTAIPLSLVITTLVFRI+GV++GTELSINVMTLGGIAVAIGELVD Sbjct: 267 PIKLQEYNVSLQEVEAAVQANNLNASGGFIIDGQTERPVRVIGRLGSLANDVLEELRKAPVKMNGDRTVLLHHVARIEEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALKDAESTLPADIVINTNLFQLKSFIDRGIYYVEEALVIGAVLVVIVLFLFLLNLRTTFITLTAIPLSLVITTLVFRIIGVITGTELSINVMTLGGIAVAIGELVD 489
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A355GHW2_9PLAN (CusA/CzcA family heavy metal efflux RND transporter (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GHW2_9PLAN) HSP 1 Score: 364 bits (935), Expect = 1.890e-119 Identity = 199/223 (89.24%), Postives = 210/223 (94.17%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 PIKLQEYNVSLQ VEAAVQ+NNLN SGGFI+ GQTER VRVIGRLGALT+DVL+ELRKAPVKMNGDRAVLL VA+I EGPAPKRGDASIDG AGVVITIVKQPHADTRKLTDDVMAAL DAE +LPADIVINT LF+LKSFIDRGIYYVEEALVIGA+LVVIVLFLFLLN RTTFITLTAIPLSLVITTLVFRIVG+++G ELSINVMTLGGIAVAIGELVD Sbjct: 250 PIKLQEYNVSLQQVEAAVQANNLNTSGGFILSGQTERPVRVIGRLGALTNDVLEELRKAPVKMNGDRAVLLNDVARIEEGPAPKRGDASIDGQAGVVITIVKQPHADTRKLTDDVMAALQDAEVSLPADIVINTKLFKLKSFIDRGIYYVEEALVIGAVLVVIVLFLFLLNLRTTFITLTAIPLSLVITTLVFRIVGLITGVELSINVMTLGGIAVAIGELVD 472
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A518AED4_9PLAN (Nickel and cobalt resistance protein CnrA n=17 Tax=Planctomycetaceae TaxID=126 RepID=A0A518AED4_9PLAN) HSP 1 Score: 374 bits (960), Expect = 3.650e-119 Identity = 201/223 (90.13%), Postives = 216/223 (96.86%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 PIKLQEYNVSLQDVEAAVQSNNLNASGGFI+ GQTER VR+IGRLGALT+DVL+ELR+APVKMNGDRAVLL VA+IVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTD+VMAAL DAE++LPADIVINT LF+LK+FIDRGIYYVEEALVIGA+LVVIVLFLFLLN RTTFITLTAIPLSLVITTLVFR+VGV++GTELSINVMTLGGIAVAIGELVD Sbjct: 267 PIKLQEYNVSLQDVEAAVQSNNLNASGGFILSGQTERPVRIIGRLGALTNDVLEELRRAPVKMNGDRAVLLENVAEIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDNVMAALHDAETSLPADIVINTKLFKLKNFIDRGIYYVEEALVIGAVLVVIVLFLFLLNLRTTFITLTAIPLSLVITTLVFRVVGVITGTELSINVMTLGGIAVAIGELVD 489
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: UPI001421CAFF (efflux RND transporter permease subunit n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001421CAFF) HSP 1 Score: 341 bits (874), Expect = 1.040e-106 Identity = 182/223 (81.61%), Postives = 202/223 (90.58%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 P +LQEYNV+LQ+VE A+Q+NNLNASGGF++ GQ+ERSVRVIGRLG L V+ +L++ PVKMN DRAVLL+ VAQIVEGPAPKRGDASIDGH GVVITIVKQPHADTRKLTD V AL DAE+ LPAD+VINT LFQLK+FIDRGIYYVEEALVIGA+LVVIVLFLFLLN RTTFITLTAIPLSLVITTLVFR+VG M+G ELS+NVMTLGGIAVAIGELVD Sbjct: 267 PNRLQEYNVTLQEVEDAIQANNLNASGGFLVEGQSERSVRVIGRLGPLPEQVITDLQQTPVKMNADRAVLLHHVAQIVEGPAPKRGDASIDGHQGVVITIVKQPHADTRKLTDTVKTALHDAEAALPADVVINTDLFQLKNFIDRGIYYVEEALVIGAVLVVIVLFLFLLNLRTTFITLTAIPLSLVITTLVFRLVGKMTGAELSVNVMTLGGIAVAIGELVD 489
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A4V0I8M7_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0I8M7_9BACT) HSP 1 Score: 321 bits (822), Expect = 3.230e-99 Identity = 173/223 (77.58%), Postives = 196/223 (87.89%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 P KL+EY VSLQDVEAA+++NNLNASGGFI GQTER VRVIGRLG L V+ +L K +K+N DRAVLL VAQI EGPAPKRGDASIDG GV++TIVKQPH DTRKLTD+ AAL ++E+ LPAD+VINT LFQLKSFIDRG+YYVEEALVIGA+LVVIVLFLFLLN RTTFITLTAIPLSLV+TTLVFR++GV++G ELSINVMTLGGIAVA+GELVD Sbjct: 267 PAKLEEYKVSLQDVEAAIKANNLNASGGFIEEGQTERPVRVIGRLGPLPDKVVADLLKVVMKVNSDRAVLLGNVAQIEEGPAPKRGDASIDGSPGVILTIVKQPHFDTRKLTDEAKAALKESEAALPADVVINTDLFQLKSFIDRGVYYVEEALVIGAVLVVIVLFLFLLNVRTTFITLTAIPLSLVVTTLVFRLIGVITGQELSINVMTLGGIAVAMGELVD 489
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A518AS44_9BACT (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518AS44_9BACT) HSP 1 Score: 317 bits (812), Expect = 8.580e-98 Identity = 169/223 (75.78%), Postives = 194/223 (87.00%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 P +LQEY+V+LQ+VE A++ NNLN SGGF+ GQ+ER VRVIGRLG L V+ EL K PVK N DR VLL+ VA++VEGPAPKRGDASIDGH+GVVITIVKQPHADTR LTD V AAL + ESTLPA++V NT LFQLKSFIDRGIYYVEEALV+GA+LVVIVLFLFLLN RTTFITLTAIPLSLV+TT+VFR++ ++ TELSINVMTLGGIAVA+GELVD Sbjct: 264 PRRLQEYDVTLQEVEQAIKENNLNTSGGFLKEGQSERPVRVIGRLGPLPLQVISELLKIPVKPNADRTVLLHHVAEVVEGPAPKRGDASIDGHSGVVITIVKQPHADTRLLTDQVKAALRETESTLPANVVFNTDLFQLKSFIDRGIYYVEEALVVGAVLVVIVLFLFLLNLRTTFITLTAIPLSLVMTTIVFRLISFLTDTELSINVMTLGGIAVAMGELVD 486
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A518AXZ3_9BACT (Nickel and cobalt resistance protein CnrA n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518AXZ3_9BACT) HSP 1 Score: 313 bits (803), Expect = 1.710e-96 Identity = 170/223 (76.23%), Postives = 191/223 (85.65%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 P+KLQEY+VSL +E A+++NNLNASGGFI GQTER VRV+GRLG V+D+LR+ PVKMN DRAVLL VA+I GPAPKRGDASIDGH GVVITIVKQPHADTRKLT++V AL D E+ LPAD+VINT+LFQLKSFIDRGIYYVEEALVIGA+LV LLN RTTFITLTAIPLSLVITTLVF++ GV++GTELSINVMTLGGIAVAIGELVD Sbjct: 265 PLKLQEYDVSLHQIEEAIKANNLNASGGFIDEGQTERPVRVVGRLGPFPEKVVDDLRQVPVKMNADRAVLLGHVARIEMGPAPKRGDASIDGHPGVVITIVKQPHADTRKLTEEVKEALRDTEAGLPADVVINTNLFQLKSFIDRGIYYVEEALVIGAVLVXXXXXXXLLNLRTTFITLTAIPLSLVITTLVFQLAGVVTGTELSINVMTLGGIAVAIGELVD 487
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A518GNH2_9PLAN (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Planctopirus ephydatiae TaxID=2528019 RepID=A0A518GNH2_9PLAN) HSP 1 Score: 313 bits (802), Expect = 2.410e-96 Identity = 168/223 (75.34%), Postives = 194/223 (87.00%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 P KL EYN +LQ+VE A+Q+NNLNASGGF+ GQTER VRVI RLG VL++LRK VK+ DR+VLL VA+IVEG APKRGD SIDGH GVVITIVKQPHADTRKLTD+V+AA+ +AE++LPADIV+ T+LFQLKSFIDRG+YYVEEAL+IGA+LVV+VLFLFLLN RTTFITLTAIPLSLVITTLVFR++ +G ELSINVMTLGGIAVA+GELVD Sbjct: 267 PDKLLEYNATLQEVETAIQTNNLNASGGFLEEGQTERPVRVIARLGPTPEKVLEDLRKVVVKVGADRSVLLGNVAEIVEGAAPKRGDGSIDGHPGVVITIVKQPHADTRKLTDEVIAAMREAEASLPADIVVETNLFQLKSFIDRGVYYVEEALLIGAVLVVVVLFLFLLNIRTTFITLTAIPLSLVITTLVFRMISFFTGQELSINVMTLGGIAVAMGELVD 489
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Match: A0A518KC61_9BACT (Nickel and cobalt resistance protein CnrA n=1 Tax=Botrimarina mediterranea TaxID=2528022 RepID=A0A518KC61_9BACT) HSP 1 Score: 311 bits (798), Expect = 8.590e-96 Identity = 166/223 (74.44%), Postives = 192/223 (86.10%), Query Frame = 1 Query: 1 PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSDVLDELRKAPVKMNGDRAVLLYQVAQIVEGPAPKRGDASIDGHAGVVITIVKQPHADTRKLTDDVMAALSDAESTLPADIVINTSLFQLKSFIDRGIYYVEEALVIGAILVVIVLFLFLLNFRTTFITLTAIPLSLVITTLVFRIVGVMSGTELSINVMTLGGIAVAIGELVD 669 P +LQEY+V+LQ+VE A+Q NNLN SGGF+ Q+ER VRVIGRLG L V++EL PVK+N DRAVLL VA++VEGPAPKRGDASIDGH+GVV+TIVKQPHADTR LTD V AAL + ++TLPAD+V NT+LFQLKSFIDRG+YYVEEALVIGA LVV+VLFLFLLN RTTFITLTAIPLSLV+T LVFR++ +S ELSINVMTLGGIAVA+GELVD Sbjct: 264 PRRLQEYDVTLQEVERAIQDNNLNTSGGFLKEDQSERPVRVIGRLGPLPRQVINELLIVPVKVNADRAVLLRHVAEVVEGPAPKRGDASIDGHSGVVVTIVKQPHADTRLLTDQVKAALRETKATLPADVVFNTNLFQLKSFIDRGVYYVEEALVIGAALVVVVLFLFLLNLRTTFITLTAIPLSLVVTALVFRLISFLSSVELSINVMTLGGIAVAMGELVD 486 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101449.303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101449.303.1 >prot_M-pyrifera_M_contig101449.303.1 ID=prot_M-pyrifera_M_contig101449.303.1|Name=mRNA_M-pyrifera_M_contig101449.303.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp PIKLQEYNVSLQDVEAAVQSNNLNASGGFIIGGQTERSVRVIGRLGALTSback to top mRNA from alignment at M-pyrifera_M_contig101449:1..669- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101449.303.1 ID=mRNA_M-pyrifera_M_contig101449.303.1|Name=mRNA_M-pyrifera_M_contig101449.303.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=669bp|location=Sequence derived from alignment at M-pyrifera_M_contig101449:1..669- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101449:1..669- >mRNA_M-pyrifera_M_contig101449.303.1 ID=mRNA_M-pyrifera_M_contig101449.303.1|Name=mRNA_M-pyrifera_M_contig101449.303.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig101449:1..669- (Macrocystis pyrifera P11B4 male)back to top |