mRNA_M-pyrifera_M_contig114510.3026.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig114510.3026.1
Unique NamemRNA_M-pyrifera_M_contig114510.3026.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: A0A812WAS8_9DINO (Fructose-bisphosphatase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WAS8_9DINO)

HSP 1 Score: 190 bits (483), Expect = 5.760e-57
Identity = 88/143 (61.54%), Postives = 108/143 (75.52%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVE 429
            P++GEF+LT K V +P KPK I S+N GN A+F   ++ +++ C       +   KPYS RYVGSM+ADVHRTLLYGGIF+YPAT SNP GKLRLLYE NPM+L+ME AGG ASTG GR+LDV P+ IH+R P+ LGC RDVE
Sbjct:  199 PAVGEFMLTSKKVTVPAKPKTIYSINEGNWATFPQPVKDFITSC-------KGAAKPYSLRYVGSMVADVHRTLLYGGIFMYPATTSNPKGKLRLLYECNPMSLLMETAGGKASTGAGRVLDVMPTSIHERCPIYLGCARDVE 334          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: A0A7S1C618_9STRA (Fructose-bisphosphatase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C618_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.550e-54
Identity = 86/144 (59.72%), Postives = 104/144 (72.22%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVER 432
            PSIGEFLLTH+ V+IP  PK+I SVN GN+AS    ++ ++  C  G         PYS RYVGSM+ DVHRTL+YGGIF+YP+T S PDGKLRLLYE NPMA+IME AGG A  G  RILD+ P  IH+R P+ LGC RDV++
Sbjct:  215 PSIGEFLLTHRDVKIPSSPKKIYSVNEGNVASMPAAVQTFIDGCKAG-------DSPYSLRYVGSMVTDVHRTLMYGGIFMYPSTSSAPDGKLRLLYECNPMAMIMEQAGGRAIDGHRRILDIEPKKIHERSPIFLGCARDVDK 351          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: A0A3F2RVQ3_9STRA (Fructose-bisphosphatase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVQ3_9STRA)

HSP 1 Score: 182 bits (461), Expect = 6.360e-54
Identity = 82/151 (54.30%), Postives = 111/151 (73.51%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCLQCIRE 453
            P+IG F+L+HK++RIP++PK I S N GN A +    + +V EC       + K KPY+ARYVGSM++D+HRT+LYGGI+LYP +  + DGKLRLLYE NPM+ IME AGGM++TG  R+LD+ P+ IHQR P+ LGC RDV+R +   +E
Sbjct:  188 PTIGAFILSHKNMRIPDEPKTIYSCNEGNYAHWDRASKAFVDEC-------KTKPKPYAARYVGSMVSDIHRTILYGGIYLYPGSSKSKDGKLRLLYECNPMSFIMEQAGGMSTTGTDRVLDLVPTSIHQRSPIFLGCKRDVQRVIDLYKE 331          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: H3GLI1_PHYRM (Fructose-bisphosphatase n=2 Tax=Phytophthora TaxID=4783 RepID=H3GLI1_PHYRM)

HSP 1 Score: 181 bits (458), Expect = 1.060e-53
Identity = 81/151 (53.64%), Postives = 109/151 (72.19%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCLQCIRE 453
            P+IG F+L+HK +RIPE PK I S N GN A +    + +V EC       + K  PY+ARYVGSM++D+HRT+LYGGI+LYP +  + DGKLRLLYE NPM+ IME AGG ++TG  R+LD+ P+HIHQR P+ LGC RDV+R ++  ++
Sbjct:  168 PTIGAFILSHKDMRIPENPKTIYSCNEGNYAHWDKASKAFVDEC-------KNKPTPYNARYVGSMVSDIHRTILYGGIYLYPGSDKSKDGKLRLLYEGNPMSFIMEQAGGASTTGTERVLDLCPTHIHQRSPIFLGCKRDVQRVIELYKQ 311          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: A0A024G0B9_9STRA (Fructose-bisphosphatase n=2 Tax=Albugo TaxID=65356 RepID=A0A024G0B9_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.750e-53
Identity = 85/147 (57.82%), Postives = 108/147 (73.47%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCLQ 441
            P IG F+L+H+ +RIPE PK+I S N GN A +    R +V EC   + +G   T+ YSARYVGSM++DVHRTLLYGGIF YP    + +GKLRLLYEANPM+ IME AGG++STG  R+LD+ P HIH+R P+ LGC RDVER ++
Sbjct:  187 PQIGAFVLSHRDIRIPENPKRIYSCNEGNYALWDKATRAFVDEC---KADG---TEAYSARYVGSMVSDVHRTLLYGGIFCYPGDAKSKNGKLRLLYEANPMSFIMEHAGGISSTGTQRVLDIIPRHIHERAPIFLGCKRDVERVIE 327          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: A0A2D4BF35_PYTIN (Fructose-bisphosphatase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF35_PYTIN)

HSP 1 Score: 179 bits (453), Expect = 9.610e-53
Identity = 84/147 (57.14%), Postives = 107/147 (72.79%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCLQ 441
            P+IG F+L+H  +RIPEKPK I S N GN + +    + +V EC       + K  PYSARYVGSM++DVHRTLLYGGIF+YPA   + DGKLRLLYEANPM+ I+E AGGM++TG  R+LD+ P+ IHQR  + LGC RDV+R L+
Sbjct:  188 PTIGAFILSHHDIRIPEKPKTIYSCNEGNYSLWDAPTKAFVDEC-------KNKPSPYSARYVGSMVSDVHRTLLYGGIFMYPADKKSKDGKLRLLYEANPMSFIVEQAGGMSTTGTQRVLDIVPTDIHQRSSIFLGCERDVKRVLE 327          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: H3HC28_PHYRM (Fructose-bisphosphatase n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3HC28_PHYRM)

HSP 1 Score: 179 bits (453), Expect = 1.010e-52
Identity = 84/151 (55.63%), Postives = 108/151 (71.52%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCLQCIRE 453
            P+IG F+L+ K +RIP++PK I S N GN A +    + +V EC       + K KPY+ARYVGSM++D+HRT+LYGGI+LYP +    DGKLRLLYE NPM+ IME AGGMA+TG  RILD+ P+ IHQR P+ LGC RDV+R L   +E
Sbjct:  188 PTIGAFILSQKDIRIPDEPKTIYSCNEGNYAHWDRATKAFVDEC-------KNKPKPYAARYVGSMVSDIHRTILYGGIYLYPGSEKVKDGKLRLLYECNPMSFIMEQAGGMATTGTERILDLVPTDIHQRSPIFLGCKRDVQRVLDLHKE 331          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: K3WLA5_GLOUD (Fructose-bisphosphatase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLA5_GLOUD)

HSP 1 Score: 178 bits (451), Expect = 1.970e-52
Identity = 83/151 (54.97%), Postives = 109/151 (72.19%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCLQCIRE 453
            P+IG F+L+HK+++IPE  K I S N GN + +    + ++ EC       + K KPYSARYVGSM++DVHRTLLYGGIFLYP+   + DGKLRLLYEANPM+ I+E AGG+A+TG  R+LD+ P+HIH+R P+ LG  RDV R L+   E
Sbjct:  188 PTIGAFILSHKNIKIPEDSKTIYSCNEGNYSLWDAPTKAFIEEC-------KNKPKPYSARYVGSMVSDVHRTLLYGGIFLYPSDSKSKDGKLRLLYEANPMSFIVEQAGGLATTGTQRVLDLVPTHIHERSPIFLGSKRDVNRVLELYAE 331          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: A0A5A8E717_CAFRO (Fructose-bisphosphatase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E717_CAFRO)

HSP 1 Score: 177 bits (449), Expect = 7.050e-52
Identity = 86/146 (58.90%), Postives = 107/146 (73.29%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCL 438
            PS+GEF++T+K +R+P   K+I S+N GN+ S   G++ +V+EC +G        KPYS RYVGSM+ADVHRTL YGGIFLYPAT S+  GKLRLLYEANPMA +ME AGG AS+G  RIL+V P  IH R PVI+G  RDV+  L
Sbjct:  210 PSLGEFIITNKDLRLPTPGKRIYSINEGNLKSMPAGVQAFVAECKDG-------AKPYSLRYVGSMVADVHRTLCYGGIFLYPATASSKSGKLRLLYEANPMAFLMEHAGGSASSGSCRILEVEPKGIHCRCPVIMGSPRDVDNVL 348          
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Match: UPI0006C97E56 (fructose-1,6-bisphosphatase 1 n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C97E56)

HSP 1 Score: 176 bits (446), Expect = 1.230e-51
Identity = 85/150 (56.67%), Postives = 111/150 (74.00%), Query Frame = 1
Query:    1 PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGEGEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEANPMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCLQCIR 450
            P+IGEF+LT K+++IP K K I S+N GN  +++ GI++Y+    +         KPYS+RYVGSM+ADVHRT+ YGGIF+YPAT  NP+GKLRLLYE NPMA I++ AGG+AS G+  ILD+ PS+IHQR P+ LG T DVE  L CI+
Sbjct:  192 PAIGEFILTEKNMKIPPKGK-IYSINEGNETTWNKGIKEYIDSKKK-----PPSGKPYSSRYVGSMVADVHRTIKYGGIFMYPATSDNPNGKLRLLYECNPMAYIVKEAGGLASNGEMSILDIVPSNIHQRSPIFLGSTNDVEDVLNCIK 335          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig114510.3026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812WAS8_9DINO5.760e-5761.54Fructose-bisphosphatase n=1 Tax=Symbiodinium sp. K... [more]
A0A7S1C618_9STRA3.550e-5459.72Fructose-bisphosphatase n=1 Tax=Bicosoecida sp. CB... [more]
A0A3F2RVQ3_9STRA6.360e-5454.30Fructose-bisphosphatase n=2 Tax=Phytophthora kerno... [more]
H3GLI1_PHYRM1.060e-5353.64Fructose-bisphosphatase n=2 Tax=Phytophthora TaxID... [more]
A0A024G0B9_9STRA1.750e-5357.82Fructose-bisphosphatase n=2 Tax=Albugo TaxID=65356... [more]
A0A2D4BF35_PYTIN9.610e-5357.14Fructose-bisphosphatase n=1 Tax=Pythium insidiosum... [more]
H3HC28_PHYRM1.010e-5255.63Fructose-bisphosphatase n=27 Tax=Peronosporaceae T... [more]
K3WLA5_GLOUD1.970e-5254.97Fructose-bisphosphatase n=1 Tax=Globisporangium ul... [more]
A0A5A8E717_CAFRO7.050e-5258.90Fructose-bisphosphatase n=1 Tax=Cafeteria roenberg... [more]
UPI0006C97E561.230e-5156.67fructose-1,6-bisphosphatase 1 n=1 Tax=Copidosoma f... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig114510contigM-pyrifera_M_contig114510:119..571 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score185.7
Seed ortholog evalue1.6e-44
Seed eggNOG ortholog325452.fgenesh_scip_prom.46568.8133
KEGG rclassRC00017
KEGG koko:K03841
KEGG ReactionR00762,R04780
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910
KEGG ModuleM00003,M00165,M00167,M00344
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Fructose-1-6-bisphosphatase, N-terminal domain
EggNOG OGs3QCXH@4776,COG0158@1,KOG1458@2759
EC3.1.3.11
COG Functional cat.G
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons1
Model size453
Cds size453
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815661.5419443-CDS-M-pyrifera_M_contig114510:118..5711622815661.5419443-CDS-M-pyrifera_M_contig114510:118..571Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114510 119..571 -
1692277509.9857104-CDS-M-pyrifera_M_contig114510:118..5711692277509.9857104-CDS-M-pyrifera_M_contig114510:118..571Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig114510 119..571 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig114510.3026.1prot_M-pyrifera_M_contig114510.3026.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig114510 119..571 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig114510.3026.1

>prot_M-pyrifera_M_contig114510.3026.1 ID=prot_M-pyrifera_M_contig114510.3026.1|Name=mRNA_M-pyrifera_M_contig114510.3026.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp
PSIGEFLLTHKSVRIPEKPKQIVSVNFGNMASFSPGIRKYVSECLEGRGE
GEEKTKPYSARYVGSMIADVHRTLLYGGIFLYPATGSNPDGKLRLLYEAN
PMALIMEAAGGMASTGKGRILDVAPSHIHQRIPVILGCTRDVERCLQCIR
E
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mRNA from alignment at M-pyrifera_M_contig114510:119..571-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig114510.3026.1 ID=mRNA_M-pyrifera_M_contig114510.3026.1|Name=mRNA_M-pyrifera_M_contig114510.3026.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig114510:119..571- (Macrocystis pyrifera P11B4 male)
CCTTCGATCGGCGAGTTTTTGCTGACGCACAAGTCGGTGCGAATTCCCGA AAAACCCAAGCAGATCGTGTCTGTCAACTTTGGAAACATGGCCTCCTTCT CCCCAGGCATCCGCAAGTACGTCTCCGAGTGCCTTGAAGGCCGCGGGGAG GGCGAGGAGAAGACAAAACCCTACTCTGCCCGCTACGTCGGCAGCATGAT CGCCGATGTGCATCGCACCTTGCTCTACGGAGGCATTTTCCTCTACCCTG CCACCGGCTCCAACCCAGACGGAAAACTCAGACTCCTCTACGAAGCCAAC CCCATGGCCCTCATCATGGAGGCCGCCGGAGGAATGGCCTCCACTGGGAA AGGCAGAATCCTAGACGTCGCACCCTCCCACATCCACCAACGCATCCCAG TCATCCTCGGATGCACCAGAGACGTGGAGAGGTGCCTCCAGTGCATCCGA GAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig114510:119..571-

>mRNA_M-pyrifera_M_contig114510.3026.1 ID=mRNA_M-pyrifera_M_contig114510.3026.1|Name=mRNA_M-pyrifera_M_contig114510.3026.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig114510:119..571- (Macrocystis pyrifera P11B4 male)
CCTTCGATCGGCGAGTTTTTGCTGACGCACAAGTCGGTGCGAATTCCCGA
AAAACCCAAGCAGATCGTGTCTGTCAACTTTGGAAACATGGCCTCCTTCT
CCCCAGGCATCCGCAAGTACGTCTCCGAGTGCCTTGAAGGCCGCGGGGAG
GGCGAGGAGAAGACAAAACCCTACTCTGCCCGCTACGTCGGCAGCATGAT
CGCCGATGTGCATCGCACCTTGCTCTACGGAGGCATTTTCCTCTACCCTG
CCACCGGCTCCAACCCAGACGGAAAACTCAGACTCCTCTACGAAGCCAAC
CCCATGGCCCTCATCATGGAGGCCGCCGGAGGAATGGCCTCCACTGGGAA
AGGCAGAATCCTAGACGTCGCACCCTCCCACATCCACCAACGCATCCCAG
TCATCCTCGGATGCACCAGAGACGTGGAGAGGTGCCTCCAGTGCATCCGA
GAACCTTCGATCGGCGAGTTTTTGCTGACGCACAAGTCGGTGCGAATTCC
CGAAAAACCCAAGCAGATCGTGTCTGTCAACTTTGGAAACATGGCCTCCT
TCTCCCCAGGCATCCGCAAGTACGTCTCCGAGTGCCTTGAAGGCCGCGGG
GAGGGCGAGGAGAAGACAAAACCCTACTCTGCCCGCTACGTCGGCAGCAT
GATCGCCGATGTGCATCGCACCTTGCTCTACGGAGGCATTTTCCTCTACC
CTGCCACCGGCTCCAACCCAGACGGAAAACTCAGACTCCTCTACGAAGCC
AACCCCATGGCCCTCATCATGGAGGCCGCCGGAGGAATGGCCTCCACTGG
GAAAGGCAGAATCCTAGACGTCGCACCCTCCCACATCCACCAACGCATCC
CAGTCATCCTCGGATGCACCAGAGACGTGGAGAGGTGCCTCCAGTGCATC
CGAGAA
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