mRNA_M-pyrifera_M_contig101444.302.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A358A4N5_9ACTN (MFS domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A4N5_9ACTN) HSP 1 Score: 209 bits (531), Expect = 7.100e-65 Identity = 115/202 (56.93%), Postives = 150/202 (74.26%), Query Frame = 1 Query: 1 SPRAAETALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGV 606 SP A AL G LLM GNG+QGSLIGVR+E EGFS + +MAAYFAGFL G++VA +A VGHIRVFA LAS+AS+A LI+ + + P W ++R ++G+C+AGLYV ESWLN + TN TRG+LL+ YM+V+ G+ IGQ LL+VADP + LF+LASVLVS SLIP+ LS +S PP+ VPE +S+R L ++P G+ Sbjct: 22 SPATAARALFVGILLLMAGNGLQGSLIGVRSETEGFSVTVAGFVMAAYFAGFLFGSRVAESLIANVGHIRVFAGLASMASTAVLIHALFIDPITWGLMRFLTGLCMAGLYVTEESWLNDLATNATRGRLLSRYMVVTMGGMTIGQFLLDVADPDGVKLFLLASVLVSASLIPVVLSASSNPPLVVPERMSLRELASIVPTGI 223
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A7K2AZC8_9ACTN (MFS transporter n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2AZC8_9ACTN) HSP 1 Score: 216 bits (549), Expect = 1.390e-64 Identity = 122/213 (57.28%), Postives = 151/213 (70.89%), Query Frame = 1 Query: 1 SPRAAETALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 S +A T L+G LM+GNG+Q S++GVRAEIEGF + +MA YF GFL GT VA R LA VGHIRVFAALAS ASSA++++ + ++P W +LRLV G+CLAGLYVVVESWLN + TN RG++L YM+V G+ GQLLL DPA LF+LASVLVSL+L+PI LS T+APPV VPEPLS+R L ++P G V A G Sbjct: 12 SSKAVRTLLVG-MAFLMVGNGLQASVLGVRAEIEGFGFAVAGAVMAGYFVGFLFGTAVAERFLAAVGHIRVFAALASTASSAAILHAVWVNPVTWALLRLVFGLCLAGLYVVVESWLNDMATNANRGRILGGYMVVMMGGLAGGQLLLAGGDPAGFELFVLASVLVSLALVPITLSATTAPPVSVPEPLSLRRLVSVIPTGAVTAFWTGAGHG 223
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A2D7RXM3_9ACTN (MFS transporter n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RXM3_9ACTN) HSP 1 Score: 207 bits (527), Expect = 9.810e-62 Identity = 116/213 (54.46%), Postives = 151/213 (70.89%), Query Frame = 1 Query: 1 SPRAAETALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 SP A AL G LLM GNG+QGSLIGVR+E EGFS + +MAAYFAGFL G++VA +A VGHIRVFA LAS+AS+A LI+ + + P W ++R V+G+C+AGLYV ESWLN + TN TRG+LL+ YM+V+ G+ IGQ LL+VADP + LF+LASVLVS SLIP+ LS +S PP+ V E +S+R L ++P G+ + G Sbjct: 22 SPATAARALFLGILLLMAGNGLQGSLIGVRSETEGFSVTVAGFVMAAYFAGFLFGSRVAESLIANVGHIRVFAGLASMASTAVLIHALFIDPITWGLMRFVTGLCMAGLYVTEESWLNDLATNATRGRLLSRYMIVTMGGMTIGQFLLDVADPDGVKLFLLASVLVSASLIPVVLSASSNPPLVVSERMSLRELASIVPTGIFTTFFSGASAG 234
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A0A1YJJ0_9PSED (MFS domain-containing protein n=1 Tax=Pseudomonas taeanensis MS-3 TaxID=1395571 RepID=A0A0A1YJJ0_9PSED) HSP 1 Score: 207 bits (527), Expect = 1.080e-61 Identity = 113/206 (54.85%), Postives = 148/206 (71.84%), Query Frame = 1 Query: 22 ALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 ALL GLLMLGNG+QGSLIG+RA +EGFS+ +T I+M YF GFL G+ + R +AQVGHIRVFAALASLASS LI+ + + P +W +RLV+G C+AGL++V ESWLN +N RGQLL+ YM+++T + GQLLLN+ADP LFIL SVLVSL+L+P+ LS T AP PE +S+ LYR P G++ + ++ G Sbjct: 10 ALLLSMGLLMLGNGLQGSLIGLRASLEGFSTQFTGILMTGYFIGFLAGSTLTPRIVAQVGHIRVFAALASLASSMVLIHSVFIDPWLWFGMRLVTGFCIAGLFIVAESWLNDSASNANRGQLLSLYMVITTGAMACGQLLLNLADPGSFELFILISVLVSLALLPLLLSATPAPSFAAPEHMSLLQLYRSSPLGILGCMGTGMSIG 215
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A7Y2IDM6_9ACTN (MFS transporter n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IDM6_9ACTN) HSP 1 Score: 207 bits (527), Expect = 1.160e-61 Identity = 108/209 (51.67%), Postives = 151/209 (72.25%), Query Frame = 1 Query: 13 AETALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 A AL G LM+GNG+Q SL+G+RAE EGFS++ T I+M+ YF GFL GT++A L VGHIRVF+ALAS+ASS+ LIY I+++P W ++R V+G+C AGLYVVVE WLN + TNQ RG+++A+YM++S G+G GQ+ L+ LFI+ASVLVSL+L+P+ALS TS PP+ P + IR ++R++P G+ + L + G Sbjct: 34 ATWALFLGLAFLMMGNGLQSSLVGLRAESEGFSTTVTGIVMSFYFVGFLFGTRIANHALRNVGHIRVFSALASVASSSVLIYAISVNPYTWAMMRFVTGVCFAGLYVVVEGWLNNLATNQNRGRIMASYMVISIGGVGAGQVFLSTGATGGSDLFIVASVLVSLALVPVALSNTSTPPLYTPIAMPIREIWRIVPTGLTTSFLTGIGNG 242
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A0A1YM91_9PSED (MFS domain-containing protein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A0A1YM91_9PSED) HSP 1 Score: 206 bits (524), Expect = 2.370e-61 Identity = 108/209 (51.67%), Postives = 148/209 (70.81%), Query Frame = 1 Query: 13 AETALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 A ALL GLLMLGNG+QGSLIG+RA +EGFS+ ++M+AYF GFL G+ + + +++VGH+RVFAALASLAS+ L++ + + P +W ++R+++G C+AGLY+V ESWLN + TNQTRGQLL+ YM++ G+ GQLLLNVADP LFIL SVL+S +L+P+ LS AP P+ +R LY P GVV + L+ G Sbjct: 7 AAWALLMSMGLLMLGNGLQGSLIGLRATLEGFSTQLAGLLMSAYFVGFLLGSTLTPKIVSKVGHVRVFAALASLASTMVLLHSVFVDPTLWFIMRVITGFCMAGLYIVAESWLNDLATNQTRGQLLSLYMVIVIGGMACGQLLLNVADPGGFKLFILISVLLSFALLPVLLSDAPAPSFAAAAPMGLRQLYHSSPLGVVGCMAVGLSNG 215
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A1G7QP29_9HYPH (Predicted arabinose efflux permease, MFS family n=2 Tax=Limimonas halophila TaxID=1082479 RepID=A0A1G7QP29_9HYPH) HSP 1 Score: 205 bits (522), Expect = 6.180e-61 Identity = 111/206 (53.88%), Postives = 145/206 (70.39%), Query Frame = 1 Query: 22 ALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 ALL G GLLMLGNG+Q SL+GVRA E F SS T ++M+ Y+ GFLGG+ + R + VGH+RVFAA+AS+AS A L++ + ++PPVW V+R+V+G AGLYVV ESWLNA N+ RG+LL+ YM+VS G+G GQL+LN ADP LF + SV++S +L+PI LS TS P P PL IR LYR+ P G V L + +G Sbjct: 22 ALLLGMGLLMLGNGLQSSLLGVRAASEDFGSSVTGLVMSGYYIGFLGGSLLTPRAVIHVGHVRVFAAMASIASIAILVHSLMVTPPVWAVMRVVTGFAYAGLYVVSESWLNASAGNELRGRLLSVYMVVSYTGMGGGQLMLNAADPGAFDLFAICSVIISAALVPILLSATSQPDTTTPAPLPIRQLYRISPLGTVGCFLTGVAKG 227
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A545TR63_9PROT (MFS transporter n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TR63_9PROT) HSP 1 Score: 205 bits (521), Expect = 8.710e-61 Identity = 106/205 (51.71%), Postives = 148/205 (72.20%), Query Frame = 1 Query: 25 LLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 LL G GLLM+GNG+QG+L+GVRA +EGF ++ T +IM+ Y+AGFL G+ + R +A+VGH+RVFAALASLAS++++++ + L P W +RLV+G C AGLYVV ESWLN I TN TRGQLL+ YM+++ G+ GQLLLN ADP LF + SVL+S++L+P L+ + P + P P+ + LYRL P GVV +++ G Sbjct: 11 LLLGIGLLMIGNGLQGTLLGVRATLEGFPTATTGLIMSCYYAGFLSGSLITPRVVARVGHVRVFAALASLASASAIVHAVFLDPYSWGAMRLVTGFCFAGLYVVAESWLNDIATNDTRGQLLSVYMVITLGGMAGGQLLLNFADPESFKLFAMISVLISVALVPTCLTASRTPSFDAPTPVPLMKLYRLSPLGVVGSLITGTANG 215
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: A0A2D8HIN4_9PROT (MFS transporter n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2D8HIN4_9PROT) HSP 1 Score: 205 bits (521), Expect = 1.060e-60 Identity = 109/206 (52.91%), Postives = 150/206 (72.82%), Query Frame = 1 Query: 22 ALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 ALL G G LMLGNG+QGSL+G+RA +EGF ++ T ++M+ Y+AGFL G+ + + LA VGH+RVFAALASLASSA+L+Y + + P VW V+RL++G AGLY+V ESWLN TN+TRGQLL+ YM++ G+ +GQL LN+ADPA +LFI SVLVS++LIP+AL+ +SAP + L ++ LY + P GV+ + G Sbjct: 10 ALLLGLGFLMLGNGLQGSLVGIRASLEGFPTAVTGLVMSGYYAGFLVGSLITPKILANVGHVRVFAALASLASSAALLYAVFVDPFVWGVMRLLTGFSFAGLYIVCESWLNDAATNETRGQLLSVYMIIMMGGMAVGQLFLNMADPAGYTLFIFISVLVSIALIPMALTASSAPNFQSSTRLKLKELYNISPLGVIGMFAQGITGG 215
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Match: UPI00146E7EE2 (MFS transporter n=1 Tax=Sneathiella limimaris TaxID=1964213 RepID=UPI00146E7EE2) HSP 1 Score: 204 bits (520), Expect = 2.220e-60 Identity = 112/205 (54.63%), Postives = 150/205 (73.17%), Query Frame = 1 Query: 25 LLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAGFLGGTKVATRTLAQVGHIRVFAALASLASSASLIYGIALSPPVWIVLRLVSGMCLAGLYVVVESWLNAITTNQTRGQLLAAYMMVSTAGIGIGQLLLNVADPAKISLFILASVLVSLSLIPIALSTTSAPPVEVPEPLSIRALYRLMPPGVVAAVLFALNQG 639 LL G GL+MLGNG+QGSL+GVRA IEGF ++ T +IM+AY+ GFL G+ + + LA VGH+RVFAALASLAS+A+LI+ + P VW V RL++G AGLY+V ESWLN TN+TRG +L+ YM+++ G+ GQ+LLN DPA LF++ SVLVSL+LIP ALS + P +E P+ L IR LY + P GVV+A++ + G Sbjct: 11 LLLGIGLMMLGNGLQGSLLGVRASIEGFPTAITGLIMSAYYMGFLFGSIITPKILASVGHVRVFAALASLASTAALIHAVFADPYVWGVFRLLTGFSFAGLYIVSESWLNDTATNETRGSILSIYMVITFGGMAGGQILLNSYDPASFQLFVIVSVLVSLALIPSALSASPMPNMEAPDNLGIRQLYAISPLGVVSALVVGIAHG 215 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101444.302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101444.302.1 >prot_M-pyrifera_M_contig101444.302.1 ID=prot_M-pyrifera_M_contig101444.302.1|Name=mRNA_M-pyrifera_M_contig101444.302.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp SPRAAETALLGGFGLLMLGNGMQGSLIGVRAEIEGFSSSWTPIIMAAYFAback to top mRNA from alignment at M-pyrifera_M_contig101444:1..639- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101444.302.1 ID=mRNA_M-pyrifera_M_contig101444.302.1|Name=mRNA_M-pyrifera_M_contig101444.302.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=639bp|location=Sequence derived from alignment at M-pyrifera_M_contig101444:1..639- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101444:1..639- >mRNA_M-pyrifera_M_contig101444.302.1 ID=mRNA_M-pyrifera_M_contig101444.302.1|Name=mRNA_M-pyrifera_M_contig101444.302.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig101444:1..639- (Macrocystis pyrifera P11B4 male)back to top |